Full information on isolate KK12 (id:53)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
53
taxonomic designation
K. kingae
isolate
KK12
PFGE clone
H
isolation year
1994
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Oropharynx
disease
Asymptomatical carriage
class of disease
Carriage
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
150
total length
1,969,347 bp
max length
182,632 bp
mean length
13,129 bp
N50
50,725
L50
10
N90
10,973
L90
42
N95
4,019
L95
57
%GC
46.63
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
3
adk (adk)
3
aroE (aroE)
3
cpn60 (cpn60)
3
gdh (gdh)
3
recA (recA)
3
ST
14

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