Full information on isolate KK3 (id:51)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
51
taxonomic designation
K. kingae
isolate
KK3
PFGE clone
G
isolation year
1994
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Oropharynx
disease
Asymptomatical carriage
class of disease
Carriage
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
117
total length
1,944,809 bp
max length
123,676 bp
mean length
16,623 bp
N50
67,702
L50
11
N90
13,875
L90
38
N95
5,111
L95
50
%GC
46.60
Ns
195
gaps
2
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
4
adk (adk)
2
aroE (aroE)
9
cpn60 (cpn60)
3
gdh (gdh)
7
recA (recA)
3
ST
5

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