Full information on isolate KK81 (id:50)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
50
taxonomic designation
K. kingae
isolate
KK81
PFGE clone
B
isolation year
1991
country of isolation
Israel
city or region
South
laboratory source
Yagupsky
sample origin
Unknown
disease
Arthritis
class of disease
OAI
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
135
total length
1,963,071 bp
max length
177,030 bp
mean length
14,542 bp
N50
43,109
L50
14
N90
8,671
L90
50
N95
4,634
L95
67
%GC
46.65
Ns
98
gaps
1
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
4
adk (adk)
2
aroE (aroE)
2
cpn60 (cpn60)
2
gdh (gdh)
2
recA (recA)
2
ST
22

Tools

Export:
Analysis: