Full information on isolate N10-10770 (id:19)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
19
taxonomic designation
K. kingae
isolate
N10-10770
isolation year
2010
country of isolation
France
city or region
Nantes
laboratory source
Caillon
sample origin
Blood
disease
Otitis
class of disease
Occult bacteremia
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
91
total length
1,929,058 bp
max length
177,538 bp
mean length
21,199 bp
N50
91,286
L50
8
N90
17,141
L90
33
N95
6,566
L95
40
%GC
46.69
Ns
0
gaps
0
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
9
adk (adk)
2
aroE (aroE)
7
cpn60 (cpn60)
3
gdh (gdh)
4
recA (recA)
3
ST
28

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