Full information on isolate N10-6318 (id:15)

Projects

This isolate is a member of the following projects:

public
Public isolates
Murik_2021
Genomic insights into the population structure and virulence of Kingella kingae: Infection of Kingella kingae in young children may result in a variety of clinical outcomes including skeletal infections, bacteremia and endocarditis. However, the factor determining the type and severity of the desease are not known. We used a comperative genomic approach in order to find genetic factors distigushing isolates taken from patients with different clinical outcomes, as well as asymptomatic carriers.

Provenance/primary metadata

id
15
taxonomic designation
K. kingae
isolate
N10-6318
isolation year
2010
country of isolation
France
city or region
Nantes
laboratory source
Caillon
sample origin
Joint fluid
disease
Arthritis
class of disease
OAI
sender
Bidet Philippe, APHP Robert-Debre Hospital, Paris, France
curator
Sylvain Brisse, Institut Pasteur, Paris, France (E-mail: sylvain.brisse@pasteur.fr)
update history
1 update show details
date entered
2015-04-23
datestamp
2015-04-23

Sequence bin

contigs
105
total length
1,966,764 bp
max length
158,922 bp
mean length
18,732 bp
N50
66,842
L50
10
N90
14,951
L90
36
N95
5,095
L95
48
%GC
46.68
Ns
193
gaps
2
loci tagged
0

Show sequence bin

Schemes and loci

MLST

abcZ (abcZ)
2
adk (adk)
2
aroE (aroE)
2
cpn60 (cpn60)
2
gdh (gdh)
2
recA (recA)
2
ST
23

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