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Full information on isolate NCK_SE0030 (id:82)

Provenance/primary metadata

id
82
isolate
NCK_SE0030
isolation year
2015
world region
Europe
country
France
city
Paris
host
Human
neonate
no
other strain info
ST5
source
Wound
infection
Infection
other infection info
Wound biospy
MSSE MRSE
MRSE
sender
Anne Jamet, INSERM
curator
Auto Tagger
update history
8 updates show details
date entered
2017-06-09
datestamp
2022-12-22

Sequence bin

contigs
137
total length
2,432,353 bp
max length
200,085 bp
mean length
17,755 bp
N50
76,902
L50
11
N90
21,353
L90
35
N95
11,269
L95
43
%GC
32.13
Ns
0
gaps
0
loci tagged
769

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Assembly checks

CheckStatusWarn/fail reason
Number of contigs
Assembly size
Minimum N50
%GC

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Staphylococcus epidermidis Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus > Staphylococcus epidermidis 100%

Analysis performed: 2022-12-27

Schemes and loci

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