Full information on isolate 502 (id:2)

Projects

This isolate is a member of the following project:

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Provenance/primary metadata

id
2
isolate
502
sender
Alexis Criscuolo, Institut Pasteur
curator
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update history
16 updates show details
date entered
2014-12-15
datestamp
2023-01-20
taxonomic designation
E. anophelis
isolation year
2012
world region
Europe
country
United Kingdom
city
Birmingham
host
Human
source
wound swab
source lab
University of Birmingham, UK
comments
host: military patient from Afghanistan; initially identified as E. meningoseptica
accession number
AVCQ00000000

Publication (1)

  • Quick J, Constantinidou C, Pallen MJ, Oppenheim B, Loman NJ (2014). Draft Genome Sequence of Elizabethkingia meningoseptica Isolated from a Traumatic Wound. Genome Announc 2:

Sequence bin

contigs
21
total length
3,960,658 bp
max length
1,107,592 bp
mean length
188,603 bp
N50
482,386
L50
3
N90
144,993
L90
10
N95
125,021
L95
11
%GC
35.52
Ns
0
gaps
0
loci tagged
2,932

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Elizabethkingia anophelis Bacteroidota > Flavobacteriia > Flavobacteriales > Weeksellaceae > Elizabethkingia > Elizabethkingia anophelis 100%

Analysis performed: 2024-01-14

Schemes and loci

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