Full information on isolate NUHP3 (id:10)

Projects

This isolate is a member of the following project:

public
Isolates made public

Provenance/primary metadata

id
10
isolate
NUHP3
sender
Alexis Criscuolo, Institut Pasteur
curator
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update history
10 updates show details
date entered
2014-12-15
datestamp
2023-01-20
taxonomic designation
E. anophelis
isolation year
2012
world region
Oceania
country
Singapore
host
Human
source
sputum
comments
host: cardio-thoracic ward patient
accession number
ASYG00000000

Publication (1)

  • Teo J, Tan SY, Tay M, Ding Y, Kjelleberg S, Givskov M, Lin RT, Yang L (2013). First case of E anophelis outbreak in an intensive-care unit. Lancet 382:855-6

Sequence bin

contigs
68
total length
4,333,404 bp
max length
659,425 bp
mean length
63,727 bp
N50
463,853
L50
4
N90
73,821
L90
13
N95
31,087
L95
17
%GC
35.54
Ns
17
gaps
7
loci tagged
3,146

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Elizabethkingia anophelis Bacteroidota > Flavobacteriia > Flavobacteriales > Weeksellaceae > Elizabethkingia > Elizabethkingia anophelis 100%

Analysis performed: 2024-01-14

Schemes and loci

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