Full information on isolate J13_29951 (id:404)

Projects

This isolate is a member of the following project:

public
public isolates

Provenance/primary metadata

id
404
isolate
J13_29951
species
M. massiliense
year
2019
country
Denmark
sample origin
unknown
disease
unknown
underlying disease
unknown
sender
Niels Norskov-Lauritsen, to be completed
curator
Beate Heym, Hospital group Diaconesses, Paris, France (E-mail: bheym@hopital-dcss.org)
update history
9 updates show details
date entered
2019-05-22
datestamp
2019-07-11

Sequence bin

contigs
31
total length
4,974,424 bp
max length
843,020 bp
mean length
160,466 bp
N50
295,044
L50
5
N90
110,134
L90
15
N95
79,676
L95
18
%GC
64.13
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mycobacteroides abscessus Actinomycetota > Actinomycetes > Corynebacteriales > Mycobacteriaceae > Mycobacteroides > Mycobacteroides abscessus 100%

Analysis performed: 2023-02-10

Schemes and loci

MLST

argH
11  S 
cya
13  S 
glpK
4  S 
gnd
10  S 
murC
8  S 
pta
11  S 
purH
8  S 
ST
263

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