Scheme information - SmST
please cite
MLST style typing of salmochelin locus
References
- Lam MMC, Wyres KL, Judd LM, Wick RR, Jenney A, Brisse S, Holt KE (2018). Tracking key virulence loci encoding aerobactin and salmochelin siderophore synthesis in Klebsiella pneumoniae. Genome Med 10:77
Curators
This scheme is curated by:
- Margaret Lam, Monash University
- Kat Holt, Melbourne U
- Federica Palma, Institut Pasteur, Paris, France
Fields
The primary key field indexes unique combinations of alleles at the member loci.
- ST Primary key
- Salmochelin sequence type
- iro_lineage
Loci
This scheme consists of alleles from 4 loci.
Profiles
This scheme has 49 profiles defined.