Scheme information - scgMLST629_S
please cite
An update of scheme scgMLST initially identified in Bialek-Davenet et al, 2014. This 629-loci scheme is described in Hennart et al, 2021.
References
- Hennart M, Guglielmini J, Bridel S, Maiden MCJ, Jolley KA, Criscuolo A, Brisse S (2022). A Dual Barcoding Approach to Bacterial Strain Nomenclature: Genomic Taxonomy of Klebsiella pneumoniae Strains. Mol Biol Evol 39:
Curators
This scheme is curated by:
- Chiara Crestani, Pasteur Institute, France
- Federica Palma, Institut Pasteur, Paris, France
Fields
The primary key field indexes unique combinations of alleles at the member loci.
- scgST Primary key
Loci
This scheme consists of alleles from 629 loci.
Profiles
This scheme has 56,272 profiles defined.