Scheme information - scgMLST629_S

please cite

An update of scheme scgMLST initially identified in Bialek-Davenet et al, 2014. This 629-loci scheme is described in Hennart et al, 2021.

References

  • Hennart M, Guglielmini J, Bridel S, Maiden MCJ, Jolley KA, Criscuolo A, Brisse S (2022). A Dual Barcoding Approach to Bacterial Strain Nomenclature: Genomic Taxonomy of Klebsiella pneumoniae Strains. Mol Biol Evol 39:

Curator

This scheme is curated by:

Fields

The primary key field indexes unique combinations of alleles at the member loci.

  • scgST Primary key

Loci

This scheme consists of alleles from 629 loci.

Profiles

This scheme has 37,426 profiles defined.

Links