Scheme information - YbST
please cite
Typing scheme for yersiniabactin virulence operon (ybtS ybtX ybtQ ybtP ybtA irp2 irp1 ybtU ybtT ybtE fyuA).
References
- Lam MMC, Wick RR, Wyres KL, Gorrie CL, Judd LM, Jenney AWJ, Brisse S, Holt KE (2018). Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations. Microb Genom 4:
Curators
This scheme is curated by:
- Margaret Lam, Monash University
- Kat Holt, Melbourne U
- Federica Palma, Institut Pasteur, Paris, France
Fields
The primary key field indexes unique combinations of alleles at the member loci.
- ST Primary key
- Yersiniabactin sequence type
- lineage_ICE
Loci
This scheme consists of alleles from 11 loci.
Profiles
This scheme has 600 profiles defined.