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NativeBetaLactamases

in development
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Curator(s) Last updated
blaLEN (LEN beta-lactamase) peptide203Variable: No limits set 268286C. Rodrigues2026-01-16
blaOKP_A (OKP-A beta-lactamase) peptide117Variable: No limits set 281286C. Rodrigues2025-02-10
blaOKP_B (OKP-B beta-lactamase) peptide197Variable: No limits set 286287C. Rodrigues2026-01-16
blaOKP_C (OKP-C beta-lactamase) peptide1Variable: No limits set 286286C. Rodrigues2018-10-12
blaOKP_D (OKP-D beta-lactamase) peptide8Variable: No limits set 286286C. Rodrigues2025-01-28
blaOXY (OXY beta-lactamase) peptide186Variable: No limits set 288291C. Rodrigues2026-01-25
blaSHV peptide254Variable: No limits set 279299C. Rodrigues2022-03-01

Urease-Nickel cluster

unpublished
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Last updated
amt DNA15Variable: No limits set 125112512018-08-30
nikA2 DNA18Variable: No limits set 159015902018-08-30
nikE2 DNA9Variable: No limits set 5945942018-08-30
ureA2 DNA7Variable: No limits set 3033032018-08-30
ureC2 DNA22Variable: No limits set 171717192018-08-30
yut DNA15Variable: No limits set 9999992018-08-30

Efflux systems and regulators

please cite
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Last updated
acrA DNA210Variable: No limits set 119411952018-08-30
acrB DNA283Variable: No limits set 314731472018-08-30
acrR DNA87Variable: No limits set 6516512018-08-30
marA DNA46Variable: No limits set 3783842018-08-30
marR DNA70Variable: No limits set 4344352018-08-30
soxS DNA37Variable: No limits set 3293302018-08-30
soxR DNA80Variable: No limits set 4594592018-08-30
ramA DNA47Variable: No limits set 3423422018-08-30
ramR DNA99Variable: No limits set 4865852018-08-30
rob DNA104Variable: No limits set 8698712018-08-30
sdiA DNA124Variable: No limits set 6866872018-08-30
fis DNA14Variable: No limits set 2972982018-08-30
envR DNA132Variable: No limits set 6546552018-08-30
oqxA DNA272Variable: No limits set 117611762018-08-30
oqxB DNA331Variable: No limits set 315231552018-08-30
oqxR DNA77Variable: No limits set 4665042018-08-30
rarA DNA63Variable: No limits set 3653662018-08-30

Quinolone resistance genes

please cite
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Last updated
gyrA peptide50Variable: No limits set 8778772018-08-29
gyrB peptide36Variable: No limits set 8048062018-08-29
parC peptide65Variable: No limits set 7527522019-01-30
parE peptide32Variable: No limits set 6306312018-08-29
qnrA peptide7Variable: No limits set 2182182013-06-07
qnrB peptide68Variable: No limits set 2142152013-06-07
qnrC peptide1Variable: No limits set 2212212013-06-07
qnrD peptide1Variable: No limits set 2142142013-06-07
qnrS peptide6Variable: No limits set 2182182013-06-07
qnrVC peptide5Variable: No limits set 2182182013-09-10

Species-specific markers

in development
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Last updated
mtnC DNA1Fixed: 759 bp 7597592015-07-07
KpI50233a DNA58Variable: No limits set 5275292018-08-30
KP1_2389 (KP888) DNA1Fixed: 1533 bp 153315332015-07-07
KP1_4125 (yphG) DNA1Fixed: 3294 bp 329432942015-07-07
KPK_2677 (KV770) DNA1Fixed: 588 bp 5885882015-07-07
KPK_1825 (KV1615) DNA1Fixed: 537 bp 5375372015-07-07
KPK_2449 (KV1000) DNA1Fixed: 696 bp 6966962015-07-07

hvK2 multiplex PCR

please cite
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Last updated
nikA2 DNA18Variable: No limits set 159015902018-08-30
KpI50233a DNA58Variable: No limits set 5275292018-08-30
kpiA (pil6a) DNA7Variable: No limits set 5375372018-08-30
kphA (pil2b) DNA6Variable: No limits set 5105102018-08-30
smdr2 DNA3Variable: No limits set 3273272018-08-30

Heavy metal resistance genes

please cite
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Last updated
arsA DNA36Variable: No limits set 17501752Arsenical pump-driving ATPase (Arsenite-translocating ATPase)2021-12-10
arsB DNA35Variable: No limits set 129012902021-12-10
arsC DNA36Variable: No limits set 12901290Arsenate reductase (Arsenical pump modifier)2021-12-10
arsD DNA11Variable: No limits set 3633632021-12-10
arsR DNA13Variable: No limits set 3513522021-10-21
merA DNA14Variable: No limits set 16831686mercuric reductase2021-12-10
merC DNA2Variable: No limits set 426426mercury transporter2019-12-09
merD DNA4Variable: No limits set 366366transcriptional regulator2020-05-14
merE DNA7Variable: No limits set 237237mercury resistance protein2021-10-21
merP DNA5Variable: No limits set 275276mercury transporter2021-06-17
merR DNA5Variable: No limits set 456456MerR family transcriptional regulator2021-08-04
merT DNA16Variable: No limits set 366366mercury transporter2021-10-21
pbrA DNA9Variable: No limits set 240524062021-10-21
pbrBC DNA4Variable: No limits set 114811492019-12-07
pbrR DNA3Variable: No limits set 4354412021-10-21
pcoA DNA76Variable: No limits set 181218332021-12-10
pcoB DNA49Variable: No limits set 9009002021-12-10
pcoC DNA28Variable: No limits set 3813812021-12-10
pcoD DNA52Variable: No limits set 9079302021-12-10
pcoE DNA32Variable: No limits set 4504502021-06-17
pcoR DNA23Variable: No limits set 6716972021-10-21
pcoS DNA72Variable: No limits set 140114012021-12-10
silA DNA233Variable: No limits set 31453174Cu(+)/Ag(+) efflux RND transporter permease subunit SilA (WP_004098958.1)2022-10-03
silB DNA54Variable: No limits set 12931295Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB (WP_004213579.1)2021-12-10
silC DNA85Variable: No limits set 154015432021-12-10
silE DNA44Variable: No limits set 5495502021-12-10
silF DNA25Variable: No limits set 353363Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB (WP_004213579.1)2021-12-10
silG DNA26Variable: No limits set 4414412021-12-10
silP DNA71Variable: No limits set 24392457Ag(+)-translocating P-type ATPase SilP (WP_004098955.1)2021-12-10
silR DNA139Variable: No limits set 6816812022-10-03
silS DNA73Variable: No limits set 146314782021-12-10
terA DNA66Variable: No limits set 115211522022-10-03
terB DNA37Variable: No limits set 4564562021-12-10
terC DNA55Variable: No limits set 104110412022-10-03
terD DNA31Variable: No limits set 5795792021-12-10
terE DNA32Variable: No limits set 5765762021-12-10
terW DNA36Variable: No limits set 4594592021-12-10
terX DNA31Variable: No limits set 6416422021-10-21
terY DNA38Variable: No limits set 6396392022-10-03
terZ DNA38Variable: No limits set 5855852021-12-10

OtherNativeResistanceGenes

in development
LocusDownloadTypeAllelesLength (setting)Min lengthMax length Full name/product Last updated
KPNJ2_RS23430 (fosA) DNA172Variable: (410 min; 430 max) 420420FosA family fosfomycin resistance glutathione transferase2021-11-30
ompK36 DNA1Variable: No limits set 10981098outer_membrane_protein_C2019-10-23

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