Database status

Isolates

Total

46,038

Last updated

2024-04-19

• Update history

Schemes

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.

• Classical schemes
  • MLST
  • Ribosomal MLST
  • scgMLST629_S
• Virulence
  • AbST
  • CbST
  • RmST
  • SmST
  • Virulence genes
  • YbST
• Antiobiotic resistance
  • Aminoglycoside resistance genes
  • Beta-lactamase genes
  • Quinolone resistance genes
• Capsule
  • cps cluster genes
  • hvK2 multiplex PCR
  • wzi
• Other cgMLST schemes
  • cgMLST_KpI
  • cgMLST_ST258_ST512_ST1199
  • scgMLST634
• Other schemes
  • Efflux systems and regulators
  • Heavy metal resistance genes
  • OtherResistanceGenes
  • Species-specific genes
  • Urease-Nickel cluster

Loci

5718 loci defined.

Fields

• Field description
• Defined field values