Database status

Isolates

Total

50,932

Last updated

2026-07-30

• Update history

Schemes

Schemes are collections of loci. They may be indexed, in which case they have a primary key field that identifies unique combinations of alleles.

• Typing schemes
  • MLST
  • Ribosomal MLST
  • scgMLST629_S
  • Kpn_cgMLST
  • SL147_cgMLST
  • SL307_cgMLST
• Virulence
  • AbST
  • CbST
  • RmST
  • SmST
  • Virulence genes
  • YbST
• Capsule
  • OtherCapsularClusterGenes
  • wzi
• Other schemes
  • Efflux systems and regulators
  • Heavy metal resistance genes
  • hvK2 multiplex PCR
  • mrk
  • NativeBetaLactamases
  • OtherNativeResistanceGenes
  • Quinolone resistance genes
  • Species-specific genes
  • Urease-Nickel cluster

LIN codes

LIN codes are defined for the following schemes:

Loci

4982 loci defined.

Fields

• Field description
• Defined field values