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45 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
10	04A025	SB20	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood			1	1	1	1	1	1	1	15	95524	Klebsiella pneumoniae	1	0_0_0_0_0_0_0_0_0_0	Kp1	SL15	CG15
25	MGH 78578	ATCC 700721; SB107	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Pneumonia		2	1	2	1	2	2	2	38	18934	Klebsiella pneumoniae	2	0_0_184_0_2_0_0_0_0_0	Kp1	SL38	CG38
49	09A323	SB164	K. quasipneumoniae subsp. similipneumoniae	Kp4 (7 loci)	0000	Human	Human	Blood			18	22	26	63	85	20	51	414	43675	Klebsiella quasipneumoniae	3,16502	2_1_26_0_1_0_0_0_0_0	Kp4	SL421	CG421									564	ybt 10; ICEKp4
250	SB4-2	SB1067	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Faeces	Carriage		2	1	1	1	4	4	4	17	95521	Klebsiella pneumoniae	4	0_0_22_12_0_1_0_0_0_0	Kp1	SL17	CG1123
252	SB1139	SB1139	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Faeces	Carriage		2	9	2	1	13	1	16	37	19240	Klebsiella pneumoniae	5	0_0_109_17_0_0_0_0_0_0	Kp1	SL37	CG10076
398	NTUH-K2044	SB3928	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	9	4	12	23	18935	Klebsiella pneumoniae	6	0_0_429_0_24_0_0_0_0_0	Kp1	SL23	CG23	1	iuc 1			26,38	rmp 1; KpVP-1	19	iro 1	326	ybt 2; ICEKp1
408	2-3	2-3; SB612	K. pneumoniae	Mixed: Kp1 (6 loci), Kp3/Kp1 (1 locus)	0000	Environment	Environment	Water			12	1	1	2	5	1	36	133	97228	Klebsiella pneumoniae	7	0_0_181_1_2_0_0_0_0_0	Kp1	SL133	CG10031
412	5-2	5-2; SB617	K. pneumoniae	Kp1 (7 loci)	0000	Environment	Environment	Water			2	1	1	17	7	16	4	55	43649	Klebsiella pneumoniae	8	0_0_268_0_0_0_0_0_0_0	Kp1	SL55	CG55
1507	10982	252	K. quasivariicola	Kp6 (7 loci)	0000	Human	Human	Intestinal			65	59	86	79	136	81	209	1155	19406	Klebsiella quasivariicola	9,5091	3_0_5_0_0_0_0_0_0_0	Kp6	SL1155	CG1155
1508	08A119	SB33	K. quasivariicola	Kp6 (7 loci)	0000	Human	Human	Blood			65	59	86	79	136	82	209	1214	19100	Klebsiella quasivariicola	10	3_0_4_0_0_0_0_0_0_0	Kp6	SL1214	CG1214
1509	BJ1-GA	SB4496	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	11	0_0_339_1_0_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2	1	clb 1	7	rmp 2; KpVP-2	3	iro 2	1	ybt 12; ICEKp10
1512	342	Kp342	K. variicola subsp. variicola	Kp3 (7 loci)	0000	Food	Maize	Unknown			16	24	30	27	36	22	55	146	18933	Klebsiella variicola	12	1_0_126_0_0_0_0_0_0_0	Kp3	SL146	CG146
1546	DSM 30104T	ATCC 13883T; SB132	K. pneumoniae	Mixed: Kp1 (6 loci), Outgroup (1 locus)	0000	Human	Human	Blood			5	5	1	1	9	6	11	3	19226	Klebsiella pneumoniae	13	0_0_421_0_1_0_1_0_0_0	Kp1	SL3	CG3
1554	07A044	SB30	K. quasipneumoniae subsp. similipneumoniae	Kp4 (7 loci)	0002	Human	Human	Blood			18	22	64	22	174	13	213	1215	52201	Klebsiella quasipneumoniae	14,5015	2_1_22_0_0_0_0_0_0_0	Kp4	SL1215	CG1215
1555	18A069	SB59	K. quasipneumoniae subsp. quasipneumoniae	Kp2 (7 loci)	0000	Human	Human	Blood			50	19	112	39	170	63	125	1118	52202	Klebsiella quasipneumoniae	15,5002	2_0_37_0_0_0_0_0_0_0	Kp2	SL1118	CG1118
1556	CDC4241-71	CDC 4241-71; SB94	K. variicola subsp. tropica	Kp5 (7 loci)	0000	Environment	Environment	Unknown			89	84	115	104	58	83	214	1216	115279	Klebsiella variicola	16	1_1_5_0_0_0_0_0_0_0	Kp5	SL1216	CG1216
1761	Kp13	SB4938	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood			10	20	2	1	9	11	14	442	19249	Klebsiella pneumoniae	17	0_0_152_0_0_0_1_0_0_0	Kp1	SL442	CG442									223	ybt 0; ICEKp5
3880	F2R9	SB48	K. variicola subsp. variicola	Kp3 (7 loci)	0000	Food	Banana	Unknown			16	18	21	154	47	22	67	2263	19408	Klebsiella variicola	18	1_0_65_0_0_0_0_0_0_0	Kp3	SL2263	CG2263
3881	01A065	SB1	K. variicola subsp. variicola	Kp3 (7 loci)	0000	Human	Human	Blood			16	24	21	27	47	22	341	2273	19310	Klebsiella variicola	19	1_0_72_1_0_0_0_0_0_0	Kp3	SL2273	CG2273
3882	SB98		K. quasipneumoniae subsp. quasipneumoniae	Kp2 (7 loci)	0000	Environment	Environment	Environment			17	19	39	20	34	18	52	622	95448	Klebsiella quasipneumoniae	20	2_0_8_1_0_0_0_0_0_0	Kp2	SL622	CG622
3883	SB1124		K. quasipneumoniae subsp. quasipneumoniae	Mixed: Kp2 (6 loci), Kp3 (1 locus)	0000	Environment	Environment	canal water			38	19	39	20	206	127	67	2274	95447	Klebsiella quasipneumoniae	5316	2_0_32_1_0_0_0_0_0_0	Kp2	SL2389	CG2389
3884	SB2110		K. quasipneumoniae subsp. quasipneumoniae	Kp2 (7 loci)	0000	Environment	Environment	Unknown			38	19	53	58	73	21	130	526	95440	Klebsiella quasipneumoniae	21	2_0_0_1_0_0_0_0_0_0	Kp2	SL526	CG526
3885	12A476	SB203	K. quasipneumoniae subsp. similipneumoniae	Mixed: Kp4 (6 loci), Kp4/Kp3 (1 locus)	0000	Human	Human	Blood			18	23	56	63	80	43	51	384	58653	Klebsiella quasipneumoniae	22	2_1_47_0_0_0_0_0_0_0	Kp4	SL384	CG384
3886	CIP110288T	SB4697	K. quasipneumoniae subsp. similipneumoniae	Kp4 (7 loci)	0000	Environment	Environment	Unknown			18	22	26	22	115	52	51	2275	95446	Klebsiella quasipneumoniae	23	2_1_23_0_0_0_0_0_0_0	Kp4	SL2275	CG2275
3887	SB610		K. quasipneumoniae subsp. similipneumoniae	Kp4 (7 loci)	0000	Environment	Environment	Lake water			13	15	18	16	25	13	50	2276	43635	Klebsiella quasipneumoniae	24	2_1_38_0_0_0_0_0_0_0	Kp4	SL2276	CG2276

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature