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70 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
58960	ERR926371		K. pneumoniae			Human	Human	Blood			3	6	1	3	1	1	13	6929			37453	0_0_1513_0_0_0_0_0_0_0	Kp1	SL11839	CG13402
58961	ERR926407		K. pneumoniae			Human	Human	CSF			1	6	1	1	1	1	1	14	19208	Klebsiella pneumoniae	37454	0_0_1_1_105_0_0_0_0_0	Kp1	SL14	CG14
58962	ERR926436		K. pneumoniae			Human	Human	Blood			2	9	2	1	13	1	16	37	19254	Klebsiella pneumoniae	37455	0_0_109_8_11_0_4_0_0_0	Kp1	SL37	CG3796
58963	ERR926437		K. pneumoniae			Human	Human	Blood			2	1	1	1	4	4	4	17	43611	Klebsiella pneumoniae	37456	0_0_22_12_22_0_1_0_0_0	Kp1	SL17	CG1123
58964	ERR926438		K. variicola subsp. variicola			Human	Human	Blood			16	18	30	76	166	29	178	6930	43612	Klebsiella variicola	37457	1_0_533_0_0_0_0_0_0_0	Kp3	SL11840	CG13403
58965	ERR926439		K. pneumoniae			Human	Human	Blood			12	6	1	3	8	5	18	4073	18944	Klebsiella pneumoniae	37458	0_0_994_0_1_0_0_0_0_0	Kp1	SL11134	CG11997
58966	ERR926441		K. pneumoniae			Human	Human	Blood			2	1	20	1	12	15	16	348	19101	Klebsiella pneumoniae	37459	0_0_238_0_2_6_0_0_0_0	Kp1	SL348	CG348
58967	ERR926443		K. pneumoniae			Human	Human	Blood			4	1	2	1	1	1	9	6931	43613	Klebsiella pneumoniae	37460	0_0_1449_1_0_0_0_0_0_0	Kp1	SL11670	CG13404
58968	ERR926445		K. pneumoniae			Human	Human	Blood			4	1	1	1	7	1	22	874	43614	Klebsiella pneumoniae	37461	0_0_124_0_5_0_0_0_0_0	Kp1	SL874	CG874
58969	ERR971948		K. pneumoniae			Human	Human	Blood			52	1	20	2	1	1	47	664	43637	Klebsiella pneumoniae	37462	0_0_101_1_4_0_0_0_0_0	Kp1	SL664	CG664
58970	ERR971949		K. pneumoniae			Human	Human	Blood			14	1	2	1	95	1	1	478	43482	Klebsiella pneumoniae	37463	0_0_32_0_4_0_1_0_0_0	Kp1	SL113	CG478
58971	ERR971950		K. variicola subsp. variicola			Human	Human	Blood			16	97	21	38	47	22	67	6932	43645	Klebsiella variicola	37464	1_0_531_0_0_0_0_0_0_0	Kp3	SL11841	CG13405
58972	ERR971951		K. pneumoniae			Human	Human	CSF			3	3	1	1	1	1	18	340	31218	Klebsiella pneumoniae	37465	0_0_105_0_11_0_34_0_1_0	Kp1	SL258	CG340
58973	ERR971952		K. pneumoniae			Human	Human	Blood			2	6	1	5	4	1	6	101	19266	Klebsiella pneumoniae	37466	0_0_84_0_8_0_0_9_2_0	Kp1	SL101	CG101									183	ybt 9; ICEKp3
58974	ERR971953		K. pneumoniae			Human	Human	Blood			2	1	5	1	17	4	42	111	19270	Klebsiella pneumoniae	37467	0_0_221_1_71_0_1_0_0_0	Kp1	SL111	CG111
58975	ERR971954		K. pneumoniae			Human	Human	Blood			2	1	2	1	1	15	4	372	43623	Klebsiella pneumoniae	22587	0_0_962_0_2_0_0_0_0_0	Kp1	SL10895	CG11611
58976	ERR971955		K. pneumoniae			Human	Human	Blood			2	1	1	1	4	1	4	18	43624	Klebsiella pneumoniae	37468	0_0_22_68_0_3_0_0_0_0	Kp1	SL17	CG12392
58977	ERR971957		K. quasipneumoniae subsp. quasipneumoniae			Human	Human	RS			18	22	26	59	566	38	51	5721	43625	Klebsiella quasipneumoniae	37469	2_1_255_0_0_0_0_0_0_0	Kp4	SL11842	CG13406
58978	ERR971959		K. pneumoniae			Human	Human	Blood			1	6	1	1	1	1	1	14	19208	Klebsiella pneumoniae	37454	0_0_1_1_105_0_0_0_0_0	Kp1	SL14	CG14
58979	ERR971960		K. pneumoniae			Human	Human	Blood			2	5	2	2	7	1	10	48	19218	Klebsiella pneumoniae	37470	0_0_147_1_0_0_0_8_0_0	Kp1	SL48	CG48
58980	ERR971961		K. pneumoniae			Human	Human	Blood			2	6	1	1	1	7	42	6933	43627	Klebsiella pneumoniae	37471	0_0_257_1_0_0_0_0_0_0	Kp1	SL1425	CG1425
58981	ERR971964		K. pneumoniae			Human	Human	Blood			52	1	20	2	1	1	47	664	43637	Klebsiella pneumoniae	37462	0_0_101_1_4_0_0_0_0_0	Kp1	SL664	CG664
58982	ERR971965		K. pneumoniae			Human	Human	Blood			2	1	1	6	7	1	12	45	19210	Klebsiella pneumoniae	37472	0_0_158_8_34_1_0_0_0_0	Kp1	SL45	CG45									78	ybt 10; ICEKp4
58983	ERR971967		K. pneumoniae			Human	Human	Blood			2	1	2	1	10	4	12	2280	43219	Klebsiella pneumoniae	37473	0_0_217_2_0_0_0_0_0_0	Kp1	SL999	CG999
58984	ERR971969		K. pneumoniae			Human	Human	Blood			25	33	1	26	7	1	56	198	18950	Klebsiella pneumoniae	37474	0_0_407_0_18_0_0_0_0_0	Kp1	SL198	CG198

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature