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Allele designations/scheme field values
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31 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
8752	SB6166	MedVetKlebs52	K. pneumoniae		0000	Environment	Environment	soil			3	1	5	1	9	4	8	4041	139547	Klebsiella pneumoniae	8425	0_0_627_0_0_0_0_0_0_0	Kp1	SL10322	CG10737
8757	SB6175	MedVetKlebs61	K. pneumoniae		0000	Environment	Environment	roots			2	1	2	1	4	1	12	4042	139546	Klebsiella pneumoniae	8426	0_0_561_0_0_0_0_0_0_0	Kp1	SL10323	CG10738
8759	SB6179	MedVetKlebs65	K. variicola subsp. variicola		0000	Environment	Environment	roots			16	32	21	105	47	22	251	4043	200786	Klebsiella variicola	8427	1_0_196_0_0_0_0_0_0_0	Kp3	SL10324	CG10739
8760	SB6181	MedVetKlebs67	K. pneumoniae		0002	Environment	Environment	soil			2	1	2	1	12	1	68	200	19185	Klebsiella pneumoniae	8428	0_0_249_0_8_0_2_0_0_0	Kp1	SL200	CG200
8763	SB6186	MedVetKlebs72	K. variicola subsp. variicola		0000	Environment	Environment	water			16	32	21	105	47	22	251	4043	200786	Klebsiella variicola	8427	1_0_196_0_0_0_0_0_0_0	Kp3	SL10324	CG10739
9488	SB6426	MVK-03E057	K. variicola subsp. variicola		0000	Environment	Environment	roots			16	18	21	27	353	22	73	4440	200787	Klebsiella variicola	8437	1_0_198_0_0_0_0_0_0_0	Kp3	SL10329	CG10744
9490	SB6428	MVK-03E066	K. pneumoniae		0000	Environment	Environment	leaves			2	1	2	1	10	1	19	35	131665	Klebsiella pneumoniae	8438,8439	0_0_131_9_0_0_0_0_0_0	Kp1	SL35	CG10386
9492	SB6430	MVK-03E073	K. pneumoniae		0000	Environment	Environment	soil			2	1	2	1	12	1	68	200	19185	Klebsiella pneumoniae	8440,8536	0_0_249_7_0_0_0_0_0_0	Kp1	SL200	CG10745
9493	SB6431	MVK-03E075	K. variicola subsp. variicola		0000	Environment	Environment	roots			16	24	21	27	120	33	124	710	200778	Klebsiella variicola	8441	1_0_182_0_0_0_0_0_0_0	Kp3	SL10330	CG10746
9495	SB6433	MVK-03E080	K. pneumoniae		0000	Environment	Environment	soil			2	1	2	1	10	1	19	35	131665	Klebsiella pneumoniae	8438,8439	0_0_131_9_0_0_0_0_0_0	Kp1	SL35	CG10386
9497	SB6435	MVK-03E084	K. quasipneumoniae subsp. similipneumoniae		0000	Environment	Environment	roots			18	22	18	85	134	37	51	740	58589	Klebsiella quasipneumoniae	8442,8494	2_1_14_0_0_0_1_0_0_0	Kp4	SL740	CG740
9499	SB6437	MVK-03E086	K. variicola subsp. variicola		0000	Environment	Environment	soil			16	18	21	27	353	22	73	4440	200787	Klebsiella variicola	8437	1_0_198_0_0_0_0_0_0_0	Kp3	SL10329	CG10744
9500	SB6438	MVK-03E089	K. variicola subsp. variicola		0000	Environment	Environment	roots			16	24	21	27	52	17	67	662	43493	Klebsiella variicola	12573	1_0_26_3_3_0_0_0_0_0	Kp3	SL363	CG10341
9501	SB6439	MVK-03E090	K. pneumoniae		0000	Environment	Environment	roots			2	1	2	293	21	1	271	4434	43429	Klebsiella pneumoniae	8443,8444	0_0_142_0_0_0_1_0_0_0	Kp1	SL3752	CG3752
9502	SB6440	MVK-03E093	K. pneumoniae		0000	Environment	Environment	soil			2	1	2	293	21	1	271	4434	43429	Klebsiella pneumoniae	8443,8444	0_0_142_0_0_0_1_0_0_0	Kp1	SL3752	CG3752
9504	SB6442	MVK-03E096	K. variicola subsp. variicola		0000	Environment	Environment	roots			16	24	21	27	29	22	105	454			12574	1_0_66_1_1_0_0_0_0_0	Kp3	SL1562	CG454
9506	SB6444	MVK-03E102	K. variicola subsp. variicola		0000	Environment	Environment	soil			16	24	21	76	229	40	178	4437	200836	Klebsiella variicola	12575	1_0_300_0_0_0_0_0_0_0	Kp3	SL10859	CG11544
9508	SB6446	MVK-03E109	K. variicola subsp. variicola		0000	Environment	Environment	leaves			16	18	21	121	47	29	67	4443	200837	Klebsiella variicola	12572	1_0_301_0_0_0_0_0_0_0	Kp3	SL10858	CG11543
9510	SB6448	MVK-03E112	K. variicola subsp. variicola		0000	Environment	Environment	roots			28	24	21	53	454	153	67	4441	200797	Klebsiella variicola	12576	1_0_22_1_0_0_0_0_0_0	Kp3	SL2594	CG2594
9516	SB6456	MVK-03E122	K. pneumoniae		0000	Environment	Environment	leaves			8	3	11	1	4	1	4	4429	43284	Klebsiella pneumoniae	12577	0_0_22_58_0_0_0_0_0_0	Kp1	SL17	CG11545
9518	SB6460	MVK-03E128	K. pneumoniae		0000	Environment	Environment	leaves			2	3	1	1	1	2	38	4420	139545	Klebsiella pneumoniae	8447	0_0_501_0_0_0_0_0_0_0	Kp1	SL10331	CG10747
9519	SB6461	MVK-03E131	K. pneumoniae		0000	Environment	Environment	roots			2	1	2	1	1	124	4	4248	139544	Klebsiella pneumoniae	8448	0_0_619_0_0_0_0_0_0_0	Kp1	SL10332	CG10748
9520	SB6464	MVK-03E137	K. pneumoniae		0000	Environment	Environment	roots			12	1	334	1	1	4	48	4421	139543	Klebsiella pneumoniae	8449	0_0_638_0_0_0_0_0_0_0	Kp1	SL10333	CG10749
9522	SB6467	MVK-03E142	K. pneumoniae		0000	Environment	Environment	leaves			2	9	2	1	13	1	16	37	19228	Klebsiella pneumoniae	8451	0_0_109_43_0_0_0_0_0_0	Kp1	SL37	CG10413
9523	SB6468	MVK-03E147	K. pneumoniae		0000	Environment	Environment	roots			2	1	65	36	1	4	16	4422	139542	Klebsiella pneumoniae	12578	0_0_927_0_0_0_0_2_0_1	Kp1	SL10860	CG11546

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature