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721

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721

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721 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
6	02A029	02A029; SB14	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood			2	1	1	1	9	4	12	23	19197	Klebsiella pneumoniae	9677	0_0_429_0_42_0_1_0_0_0	Kp1	SL23	CG23			68	clb 2					47	ybt 1; ICEKp10
17	12A041	12A041; SB42	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood			2	1	1	1	9	4	12	23	19197	Klebsiella pneumoniae	9678	0_0_429_0_61_0_0_0_0_0	Kp1	SL23	CG23	16	iuc 1	29	clb 2	31,161	rmp 1; KpVP-1	2	iro 1	340	ybt 1; ICEKp10
19	16A151	16A151; SB53	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood			2	1	1	1	9	4	12	23	43589	Klebsiella pneumoniae	9679	0_0_429_0_42_1_0_0_0_0	Kp1	SL23	CG23	1	iuc 1	68	clb 2	29	rmp 1; KpVP-1	2	iro 1	47	ybt 1; ICEKp10
25	MGH 78578	ATCC 700721; SB107	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Pneumonia		2	1	2	1	2	2	2	38	18934	Klebsiella pneumoniae	2	0_0_184_0_2_0_0_0_0_0	Kp1	SL38	CG38
62	cur15505	SB2390	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Urinary tract		C-pattern	1	6	1	1	1	1	1	14	19208	Klebsiella pneumoniae	1186,1199	0_0_1_1_0_1_1_0_0_0	Kp1	SL14	CG14									106	ybt 10; ICEKp4
213	K45-67		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Unknown			3	4	6	1	7	4	4	273	19272	Klebsiella pneumoniae	3108	0_0_197_0_0_0_0_0_0_0	Kp1	SL147	CG147
302	VI9C3	SB2803; V9902406	K. pneumoniae	Kp1 (7 loci)	0000	Animal	Horse	Abdomen	Peritonitis		2	1	1	1	9	1	12	163	19302	Klebsiella pneumoniae	9680	0_0_158_22_0_0_0_0_0_0	Kp1	SL45	CG10815									376	ybt 14; ICEKp5
325	CIP 52.204	ATCC 7380; SB3197	K. pneumoniae	Kp1 (7 loci)	0000	Unknown	Unknown	Unknown		C-pattern	9	4	2	1	1	1	27	86	19194	Klebsiella pneumoniae	9682	0_0_395_0_26_0_0_0_0_0	Kp1	SL86	CG86
373	IPEUC-1037	IPEUC-1037; SB3308	K. pneumoniae	Kp1 (7 loci)	0000	Animal	Horse	Horse			2	1	1	1	9	4	12	23	19197	Klebsiella pneumoniae	9683,9685,9692	0_0_429_0_44_1_1_0_1_0	Kp1	SL23	CG23	1	iuc 1	29	clb 2	26,38	rmp 1; KpVP-1	2	iro 1	47	ybt 1; ICEKp10
374	IPEUC-1056	IPEUC-1056; SB3309	K. pneumoniae	Kp1 (7 loci)	0000	Animal	Horse	Horse			2	1	1	1	9	4	12	23			9684	0_0_429_0_44_1_1_0_0_0	Kp1	SL23	CG23									334	ybt 1; ICEKp10
375	IPEUC-1570	IPEUC-1570; SB3310	K. pneumoniae	Kp1 (7 loci)	0000	Animal	Horse	Unknown	Metritis		2	1	1	1	9	4	12	23	43447	Klebsiella pneumoniae	9685	0_0_429_0_44_1_1_0_1_0	Kp1	SL23	CG23	1	iuc 1					2	iro 1	341	ybt 1; ICEKp10
380	03-9138	03-9138; SB3332	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Anal pus	Anal abscess		2	1	2	1	10	4	13	65	43604	Klebsiella pneumoniae	9686	0_0_391_0_11_0_0_0_0_0	Kp1	SL65	CG65	9	iuc 1			38	rmp 1; KpVP-1	8	iro 1
381	CIP 52.145	B 5055; SB3341	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Unknown		Antiserum	2	3	2	1	10	1	13	66	18953	Klebsiella pneumoniae	9687	0_0_278_0_0_0_0_0_0_0	Kp1	SL66	CG66	24	iuc 2	9	clb 1	2	rmp 2; KpVP-2	22	iro 2	315	ybt 12; ICEKp10
383	Zaire1	Necker_Zaire1; SB3431	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	19	4	12	57	43601	Klebsiella pneumoniae	9688	0_0_429_0_63_0_0_0_0_0	Kp1	SL23	CG23	1	iuc 1			39	rmp 1; KpVP-1	2	iro 1
384	SB3432	04-6021	K. pneumoniae subsp. rhinoscleromatis	Kp1 (7 loci)	0000	Human	Human	Respiratory	Rhinoscleroma		2	1	9	1	15	5	28	67								30	iuc 4			66	rmp 4; chromosomal
397	A5011	A5011; SB3927	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	9	4	12	23	19197	Klebsiella pneumoniae	9689	0_0_429_0_57_0_0_0_0_0	Kp1	SL23	CG23					26,38	rmp 1; KpVP-1	2	iro 1
398	NTUH-K2044	SB3928	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	9	4	12	23	18935	Klebsiella pneumoniae	6	0_0_429_0_24_0_0_0_0_0	Kp1	SL23	CG23	1	iuc 1			26,38	rmp 1; KpVP-1	19	iro 1	326	ybt 2; ICEKp1
1507	10982	252	K. quasivariicola	Kp6 (7 loci)	0000	Human	Human	Intestinal			65	59	86	79	136	81	209	1155	19406	Klebsiella quasivariicola	9,5091	3_0_5_0_0_0_0_0_0_0	Kp6	SL1155	CG1155
1508	08A119	SB33	K. quasivariicola	Kp6 (7 loci)	0000	Human	Human	Blood			65	59	86	79	136	82	209	1214	19100	Klebsiella quasivariicola	10	3_0_4_0_0_0_0_0_0_0	Kp6	SL1214	CG1214
1509	BJ1-GA	SB4496	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		2	1	1	1	1	4	19	380	19225	Klebsiella pneumoniae	11	0_0_339_1_0_0_0_0_0_0	Kp1	SL380	CG10118	14	iuc 2	1	clb 1	7	rmp 2; KpVP-2	3	iro 2	1	ybt 12; ICEKp10
1510	T69	SB4536	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Liver pus	Liver abscess		43	1	2	1	10	4	13	375	19231	Klebsiella pneumoniae	4402	0_0_390_0_6_0_0_0_0_0	Kp1	SL375	CG375	20	iuc 1			27,55	rmp 1; KpVP-1	14	iro 1	12	ybt 5; ICEKp6?
1511	SA1	SB4021	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Pneumonia		9	4	2	1	1	1	27	86	19230	Klebsiella pneumoniae	4378	0_0_395_0_2_0_0_0_0_0	Kp1	SL86	CG86	1	iuc 1			26,38	rmp 1; KpVP-1	1	iro 1	13	ybt 22; ICEKp12
1512	342	Kp342	K. variicola subsp. variicola	Kp3 (7 loci)	0000	Food	Maize	Unknown			16	24	30	27	36	22	55	146	18933	Klebsiella variicola	12	1_0_126_0_0_0_0_0_0_0	Kp3	SL146	CG146
1513	100519185	SB4360	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Severe Sepsis		9	4	2	1	1	1	27	86	19194	Klebsiella pneumoniae	9691	0_0_395_0_23_0_0_0_0_0	Kp1	SL86	CG86
1514	hvKP1		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Liver abscess		9	4	2	1	1	1	27	86	19194	Klebsiella pneumoniae	2799	0_0_395_0_13_1_0_0_0_0	Kp1	SL86	CG86	1	iuc 1			26,38	rmp 1; KpVP-1	15	iro 1	72	ybt 10; ICEKp4?

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature