Sequence bin for SB6456

Contig summary statistics

Contigs
55
Total length
5,030,401
Minimum length
253
Maximum length
692,708
Mean length
91,462
N50
178,312
L50
7
N90
64,127
L90
25
N95
37,489
L95
30

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1081397Illuminacontig_0001692708KP1_2532_S 127424127759 EMBL GBK
ydgB_S 127756128478
ydgI_S 128515129897
KP1_2535_S 130075131025
KP1_2536_S 131022131204
blaSHV (SHV beta-lactamase) 215334216191
KP1_2672_S 247995248939
KP1_2673_S 249084249566
yneJ_S 249520250398
yneI_S 250995251888
yneH_S 251969252895
KP1_2697_S 265357266028
KP1_2700_S 267631268659
KP1_2702_S 269227269538
KP1_2703_S 269715270470
gst_S 601810602415
pdxY_S 602458603318
tyrS_S 603380604654
pdxH_S 604779605435
KP1_3049_S 605493605816
anmK_S 605909607006
ydhM_S 615077615676
nemA_S 615730616827
gloA_S 616906617313
KP1_3065_S 618146618493
ydhO_S 618834619706
1081378Illuminacontig_0002507919tolR_S 44494877 EMBL GBK
tolQ_S 48815573
KP1_1697_S 55705974
KP1_1696_S 61246414
cydB_S 65467685
cydA_S 77019272
KP1_1663_S 4204642738
ybfF_S 4277843551
KP1_1661_S 4361643978
fldA_S 4406144660
fur_S 4495245404
KP1_1657_S 4602046352
KP1_1656_S 4640046900
metH_S 4787748185
glnS_S 4823949906
nagE_S 5008552040
nagB_S 5235553155
nagA_S 5326954417
nagC_S 5442655646
nagD_S 5576356515
rlpB_S 7753078120
holA_S 7812979151
nadD_S 7914179794
KP1_1624_S 8071981036
KP1_1623_S 8104081507
ybeF_S 8825789261
lipA_S 8944290407
tatE_S 9059890804
ybeM_S 9104791835
KP1_1612_S 9192592308
cspE_S 9237692669
pagP_S 9278093298
dcuC_S 9363795010
KP1_1607_S 9510395900
ykfE_S 173164173691
betT_S 173737175770
betB_S 176500177972
betA_S 177941179650
fsr_S 328703329923
ybaL_S 330149331825
gsk_S 331861333165
hemH_S 333229334191
adk_S 334320334964
rpmJ (50S ribosomal protein L36) 356317356457
rpmE (50S ribosomal protein L31) 356457356720
rpmE2_S 356457356720
lacI_S 356836357906
ptsG_S 359585359899
KP1_1275_S 388393388761
ppiD_S 388910390784
hupB_S 390999391271
lon_S 391481393943
clpX_S 394019395293
clpP_S 395544396167
tig_S 396477397775
KP1_1251_S 412229413047
KP1_1248_S 414754415932
yajR_S 416092417456
KP1_1246_S 417500418084
apbA_S 418183419094
thiJ_S 419051419650
nrdR_S 429622430071
yajI_S 430219430758
tsx_S 431057431941
KP1_1228_S 431996432691
KP1_1227_S 432716433081
KP1_1211_S 443843444709
KP1_1209_S 446661447206
KP1_1207_S 447393448034
KP1_1206_S 448301449203
1081408Illuminacontig_0003401602ybhA_S 1606016878 EMBL GBK
ybhE_S 1710718102
KP1_1726_S 1821318479
KP1_1727_S 1853118836
KP1_1728_S 1896319208
KP1_1729_S 1953720748
KP1_1730_S 2090421638
KP1_1731_S 2168022234
KP1_1732_S 2231622681
KP1_1734_S 2378724710
glnH_S 8761588361
dps_S 8877089273
ybiF_S 8951190398
ompX_S 9075091262
ybiP_S 9135392942
KP1_1803_S 9320293327
mntR_S 9351393986
ybiR_S 9398395095
potH_S 144626145579
potI_S 145534146421
KP1_1853_S 146479146967
KP1_1855_S 148215148931
hcr_S 163997164965
hcp_S 164976166628
ybjE_S 166772167671
rpsA (30S ribosomal protein S1) 208348210021
ihfB_S 210173210460
msbA_S 212967214715
KP1_1916_S 215747216976
ssuC_S 246332247123
ssuD_S 247134248279
ssuA_S 248276249238
ssuE_S 249231249806
pyrD_S 250029251066
KP1_2044_S 329914330651
ycdY_S 330674331228
ycdZ_S 331332331814
KP1_2047_S 331946332491
KP1_2048_S 332558333151
mdoC_S 333186334346
yceF_S 359711360295
KP1_2077_S 360437360958
rpmF (50S ribosomal protein L32) 360975361148
plsX_S 361352362449
fabH_S 362503363456
fabD_S 363472364401
fabG_S 364414365148
fabF_S 365685366926
pabC_S 367052367861
yceG_S 367863368885
tmk_S 368875369516
holB_S 369513370517
ycfH_S 370528371322
ptsG2_S 371619373052
KP1_2092_S 373314373670
iutA 379471381672
ycfQ_S 381904382539
ycfS_S 383175384134
mfd_S 384298387744
ycfU_S 388040389248
ycfV_S 389241389942
ycfW_S 389942391186
1081415Illuminacontig_0009330707KP1_4652_S 85939093 EMBL GBK
endA_S 91319895
KP1_4654_S 991210718
gshB_S 1073911689
KP1_4657_S 1186412427
yqgF_S 1242712843
KP1_4731_S 7203972707
ygiC_S 7271373873
ygiD_S 7391874709
ygiE_S 7489675666
ribB_S 7572876381
uppP_S 8528186102
folB_S 8630186687
KP1_4750_S 8679287409
ureD_S 8780788631
ureA_S 8864188943
ureB_S 8895389273
rpsU (30S ribosomal protein S21) 9581496029
KP1_4812_S 174750175250
ygjR_S 175324176313
ygjT_S 176585177556
ygjU_S 177823179070
KP1_4816_S 179086179640
KP1_4822_S 186380186763
KP1_4823_S 186913187281
KP1_4824_S 187327187632
KP1_4825_S 187635188033
KP1_4826_S 188030188326
KP1_4861_S 203760204146
yraO_S 204136204762
yraP_S 204772205347
KP1_4865_S 205469206509
yhbO_S 207232207897
KP1_4868_S 207859208302
KP1_4870_S 208629209132
KP1_4871_S 209126209650
yhbU_S 209872210867
yhbV_S 210858211751
yhbW_S 211895212902
rpsO (30S ribosomal protein S15) 230998231267
infB 233908234225
rpmA (50S ribosomal protein L27) 252371252628
rplU (50S ribosomal protein L21) 252649252960
yrbI_S 261727262293
KP1_4921_S 262290262865
yhbN_S 262834263379
yhbG_S 263386264111
rpoN_S 264159265592
yhbH_S 265615265902
ptsN_S 265973266461
KP1_4927_S 266507267361
ptsO_S 267358267630
rpsI (30S ribosomal protein S9) 285413285805
rplM (50S ribosomal protein L13) 285821286249
mdh 291313291789
KP1_4977_S 310851311042
KP1_4978_S 311257312273
KP1_4979_S 312273312881
KP1_4980_S 313105313557
accB_S 313580314047
accC_S 314058315407
KP1_4984_S 315518315760
prmA_S 317213318094
KP1_4987_S 318064318294
1081393Illuminacontig_0007229165yicE_S 1147812878 EMBL GBK
gltS_S 1352614356
glpK_S 1447115982
glpF_S 1600416855
KP1_5367_S 1729817543
sbp_S 1769518684
rpmB (50S ribosomal protein L28) 4943149667
rpmG (50S ribosomal protein L33) 4968849855
KP1_5309_S 6857769524
KP1_5307_S 6952870799
yibO_S 7080972434
yibN_S 7259973030
grxC_S 7313573386
secB_S 7344773914
KP1_5262_S 114753115463
tkrA_S 115572116543
KP1_5260_S 116568117848
KP1_5259_S 117953118888
KP1_5258_S 118892119641
KP1_5213_S 174066175097
KP1_5210_S 177016177585
prlC_S 185375187417
yhiP_S 188323189795
uspA_S 190052190489
yhiO_S 190872191207
pitA_S 191263192759
1081417Illuminacontig_0012210460wzi (Wzi outer membrane protein of cps cluster) 40214467 EMBL GBK
mglA_S 9475196271
mglB_S 9639097388
galS_S 9768598707
folE_S 100036100704
yejE_S 127606128631
KP1_3844_S 130226130570
bcr_S 130902132098
rsuA_S 132095132814
KP1_3852_S 137496138131
KP1_3853_S 138175138936
yejK_S 138956139963
KP1_3855_S 140150140377
yejM_S 140396142156
nuoF_S 203601204938
nuoE_S 204935205435
nuoC_S 205438207246
nuoB_S 207333208007
nuoA_S 208023208469
1081380Illuminacontig_0016178312epd_S 9651993 EMBL GBK
pgk_S 20333196
fbaA_S 32944373
yggB_S 45635420
yggA_S 55726207
yggE_S 62977064
KP1_4633_S 1134411673
KP1_4632_S 1183412418
pepP_S 1244213758
KP1_4629_S 1494416146
KP1_4618_S 2728428012
KP1_4617_S 2806228373
yqfA_S 2853729196
KP1_4613_S 3057630842
KP1_4612_S 3082331233
fldB_S 3124031761
xerD_S 3186232758
dsbC_S 3278133494
mrkA 7340174009
mrkB 7410574806
mrkC 7481877304
mrkD 7729578290
mrkF 7830478939
mrkJ 7897379689
mrkI 7983380417
mrkH 8042381127
KP1_4524_S 106644108044
KP1_4523_S 108052109479
KP1_4521_S 109547110320
KP1_4520_S 110317110796
galR_S 110757111773
ygdP_S 119601120131
ptsP_S 120144122390
lgt_S 122636123511
thyA_S 123518124312
ppdA_S 124583125050
argA_S 138694140025
amiC_S 140217141506
cobD_S 141524142600
pduX_S 142604143506
pduW_S 143562144776
KP1_4457_S 169447170172
KP1_4456_S 170169170954
KP1_4455_S 170965171759
KP1_4453_S 172466173203
KP1_4452_S 173205173486
cbiQ_S 173473174150
1081374Illuminacontig_0010176274ung_S 88439532 EMBL GBK
yfiD_S 984510228
srmB_S 1027411605
yfiC_S 1171612474
nadB_S 1245914078
yfhK_S 3271634155
yfhG_S 3416434871
yfhA_S 3485836195
KP1_4132_S 3626136599
hmpA_S 3667437864
glyA_S 3819039443
suhB_S 5212852931
yfhQ_S 5305253786
iscR_S 5402154512
iscS_S 5469155905
KP1_4113_S 5593256318
iscA_S 5633656659
hscB_S 5673457249
hemF_S 149546150445
amiA_S 150445151317
KP1_4027_S 151367151507
ypeA_S 151514151954
KP1_4024_S 151941152390
KP1_4023_S 152452153027
KP1_4022_S 153122154021
1081371Illuminacontig_0004170338yjjA_S 7571776208 EMBL GBK
dnaC_S 7627477011
dnaT_S 7701477553
yjjB_S 7765678144
yjjP_S 7812078896
KP1_0775_S 7917680360
KP1_0776_S 8037781258
fhuF_S 8507785865
ycdT_S 8597287018
mtr_S 8716887521
holD_S 8905089463
rimI_S 8943289878
yjjG_S 8989390570
prfC_S 9066192250
deoA_S 9811699438
deoB_S 99491100714
KP1_0801_S 100817101536
lplA_S 101617102633
smp_S 102633103280
serB_S 103364104356
sms_S 104366105748
nadR_S 105770107002
yjjK_S 107096108763
creB_S 114172114861
creC_S 114861116285
arcA_S 117767118483
lasT_S 119116119802
thrA_S 120122122626
thrB_S 122628123557
rpsT (30S ribosomal protein S20) 138997139260
yabF_S 167092167625
kefC_S 167618169483
folA_S 169657170136
1081388Illuminacontig_0021145770KP1_3440_S 5550955955 EMBL GBK
ycgM_S 5605056709
KP1_3442_S 5672657046
minC_S 5713457832
minD_S 5785658668
minE_S 5867258941
fadD_S 6021661901
yeaY_S 6210762688
yeaZ_S 6272763422
KP1_3451_S 6561065954
KP1_3486_S 9938699769
holE_S 99873100103
exoX_S 100182100841
ptrB_S 100845102905
KP1_3490_S 103026103685
yebG_S 103825104172
purT_S 104317105495
msbB_S 112577113551
KP1_3501_S 113669114988
znuA_S 115004116074
znuC_S 116027116779
znuB_S 116779117564
ruvB_S 117628118638
ruvA_S 118647119258
1081368Illuminacontig_0022144058celC_S 115759116106 EMBL GBK
celA_S 117667117987
osmE_S 118266118604
nadE_S 118887119714
spy_S 120766121248
1081404Illuminacontig_0023141291rpmH (50S ribosomal protein L34) 9145791597 EMBL GBK
atpF_S 119921120385
atpE_S 120442120681
atpB_S 120731121546
atpI_S 121554122006
gidB_S 122551123174
rbsC_S 134864135829
rbsB_S 135857136747
rbsK_S 136851137780
yieP_S 140183140884
1081402Illuminacontig_0020138243hfq_S 77418049 EMBL GBK
hflX_S 81259405
hflK_S 947110733
hflC_S 1073611740
KP1_0445_S 1182312164
KP1_0446_S 1233612533
KP1_0467_S 2929729572
rpsF (30S ribosomal protein S6) 2991330308
priB_S 3046130628
rpsR (30S ribosomal protein S18) 3063330860
rplI (50S ribosomal protein L9) 3090231351
KP1_0513_S 7320873852
KP1_0514_S 7395475087
KP1_0515_S 7507176189
KP1_0516_S 7509876201
KP1_0517_S 7618676926
KP1_0567_S 131992132816
KP1_0568_S 132827133714
KP1_0569_S 133704134588
yjgB_S 134719135738
1081369Illuminacontig_0014109121tonB 2295923372 EMBL GBK
KP1_3291_S 2457324857
pfkB_S 2495225884
KP1_3289_S 2624126999
rpmI (50S ribosomal protein L35) 3050430701
rplT (50S ribosomal protein L20) 3075231108
1081383Illuminacontig_0008106163asd_S 2147322627 EMBL GBK
glgB_S 2286625052
glgX_S 2514527025
glgC_S 2710628401
glgA_S 2840129834
aroK_S 7095371474
aroB_S 7153072624
dam_S 7407474901
rpe_S 7491975596
gph_S 7558976350
trpS_S 7634377347
cysG_S 7742078793
nirD_S 7894779273
yhfC_S 8337184558
ppiA_S 8483585404
KP1_5076_S 8551185678
KP1_5075_S 8566886270
pabA_S 8630386866
crp_S 9029790929
KP1_5070_S 9123691640
prkB_S 9169592564
KP1_5068_S 9260192819
yheT_S 9281693838
yheS_S 9404295946
rpsL (30S ribosomal protein S12) 102760103134
rpsG (30S ribosomal protein S7) 103231103701
1081401Illuminacontig_0005103062apaH_S 3921240 EMBL GBK
apaG_S 12451622
ksgA_S 16252446
pdxA_S 24433432
araD_S 1932620021
araA_S 2015921661
araB_S 2167223381
araC_S 2371924564
yabI_S 2469325460
tbpA_S 2771828662
yabN_S 2899130646
KP1_0882_S 3072830886
setA_S 3115432338
gudP_S 3237233682
ilvI_S 4700348727
ilvH_S 4870049221
fruR_S 4940250406
KP1_0903_S 5101151505
mraW_S 5150852449
ftsL_S 5244652811
ftsI_S 5282754593
mutT_S 7256472956
yacG_S 7300973203
KP1_0925_S 7321373956
coaE_S 7395674576
KP1_0927_S 7473274863
guaC_S 7492075963
ppdD_S 7859179022
nadC_S 7920480097
ampD_S 8023180794
ampE_S 8079181645
KP1_0935_S 8188182831
KP1_0936_S 8283184237
lpdA_S 9213293559
KP1_0945_S 9372494008
KP1_0946_S 9405494869
1081367 Illumina contig_0017 96937
1081375Illuminacontig_000695682hpt_S 61476695 EMBL GBK
yadG_S 76028528
yadH_S 85259295
yadI_S 94189858
KP1_0965_S 992311170
folK_S 1345713936
yadB_S 1539016271
dksA_S 1633116804
sfsA_S 1694917665
map_S 6085961653
rpsB (30S ribosomal protein S2) 6197662701
tsf_S 6282163672
pyrH_S 6382364548
frr_S 6469965256
ispC_S 6548566687
1081366Illuminacontig_002494161KP1_0122_S 3251176 EMBL GBK
btuB_S 11212959
KP1_0120_S 30023124
trmA_S 33264426
KP1_0118_S 44784837
yijC_S 48535485
rpmE (50S ribosomal protein L31) 3011330325
cpxP_S 4083041333
cpxR_S 4148342181
cpxA_S 4217843551
KP1_0077_S 4361944293
sodA_S 4436644992
rhaT_S 4527646310
rhaR_S 4634347188
rhaS_S 4726248098
rhaB_S 4840949875
rhaA_S 4986651131
rhaD_S 5128152111
bipA_S 7652978352
glnA_S 7873180140
glnL_S 8032981378
glnG_S 8138782796
hemN_S 8305384426
KP1_0026_S 8461585121
engB_S 8570586337
polA_S 8668589477
1081395Illuminacontig_002586470ilvM_S 53745631 EMBL GBK
ilvE_S 56486577
ilvD_S 66388488
ilvA_S 854810035
ilvY_S 1003211006
cyaY_S 4625946579
KP1_0167_S 4672646929
dapF_S 4696247789
KP1_0169_S 4778648493
xerC_S 4849049392
yigB_S 4939250108
rhtB_S 5980660426
pldB_S 6053661528
KP1_0183_S 6157362373
yigM_S 6246263361
metR_S 6324964202
udp_S 6785868619
yigN_S 6875570203
ubiE_S 7027471029
KP1_0193_S 7104371648
ubiB_S 7164573285
tatA_S 7336773666
tatB_S 7367074206
tatC_S 7420974988
tatD_S 7503375824
rfaH_S 7582176309
ubiD_S 7648877963
fre_S 7801378714
fadA_S 7882179984
1081406Illuminacontig_002686299phoE 1197012389 EMBL GBK
crl_S 5613956537
frsA_S 5659557839
gpt_S 5794558403
pepD_S 5866160118
yafP_S 6016160613
yafE_S 8125382023
KP1_1068_S 8211582921
yafC_S 8431085215
dkgB_S 8526186064
1081390Illuminacontig_002782566KP1_2225_S 1519915543 EMBL GBK
KP1_2224_S 1563815916
yeaA_S 1596016373
gapA 1695517404
KP1_2220_S 1778218666
yeaE_S 1872319607
1081394Illuminacontig_001168860aroC_S 3052931617 EMBL GBK
mepA_S 3162032444
yfcA_S 3244433253
yfcM_S 3325333801
KP1_3965_S 3383334114
flk_S 3901539992
KP1_3960_S 3999140119
pdxB_S 4010341239
KP1_3958_S 4130342316
truA_S 4231643128
dedA_S 4315543814
accD_S 4393744920
folX_S 5591856280
yfcG_S 5634656975
yfcF_S 5715657794
yfcD_S 5846659017
1081391Illuminacontig_002867847hmsS_S 2191022359 EMBL GBK
KP1_0379_S 2240523238
KP1_0378_S 2340124099
cbpA_S 2424525162
KP1_0375_S 2514725467
1081413Illuminacontig_002964127metA_S 8521781 EMBL GBK
aceA_S 37085027
aceK_S 51306914
iclR_S 69657891
pgi 1994020371
KP1_0299_S 4928849704
KP1_0300_S 4970850064
uvrA_S 5006552890
ssb_S 5314253666
1081370Illuminacontig_001859572KP1_4281_S 49596635 EMBL GBK
emrA_S 83269498
emrR_S 962410124
ygaH_S 1024510580
1081385 Illumina contig_0030 55641
1081384Illuminacontig_001354853prfA_S 2182622908 EMBL GBK
hemK_S 2290823756
ychQ_S 2375624148
kdsA_S 2500425858
chaA_S 2594527045
chaB_S 2730927539
chaC_S 2767628356
1081412 Illumina contig_0031 45622
1081411 Illumina contig_0015 37489
1081389Illuminacontig_003234687rplK (50S ribosomal protein L11) 17792207 EMBL GBK
rplA (50S ribosomal protein L1) 22112915
rplJ (50S ribosomal protein L10) 33293826
rplL (50S ribosomal protein L7/L12) 38934258
rpoB 62396739
rsd_S 2297023467
nudC_S 2356124334
hemE_S 2437525439
nfi_S 2545226123
KP1_0239_S 2616626756
KP1_0241_S 2694327215
KP1_0242_S 2722227923
zraP_S 2792728364
1081414Illuminacontig_003329925silR 39864666 EMBL GBK
silA 790611052
1081398Illuminacontig_003428657smpB_S 20282510 EMBL GBK
KP1_4197_S 26213097
KP1_4196_S 30873377
smpA_S 34443785
ppnK_S 56816559
grpE_S 66847274
rpsP (30S ribosomal protein S16) 1127911527
rplS (50S ribosomal protein L19) 1293313280
1081405Illuminacontig_003526207rpsJ (30S ribosomal protein S10) 18982209 EMBL GBK
rplC (50S ribosomal protein L3) 22422871
rplD (50S ribosomal protein L4) 28823487
rplW (50S ribosomal protein L23) 34843786
rplB (50S ribosomal protein L2) 38044625
rpsS (30S ribosomal protein S19) 46424920
rplV (50S ribosomal protein L22) 49355267
rpsC (30S ribosomal protein S3) 52855983
rplP (50S ribosomal protein L16) 59966406
rpmC (50S ribosomal protein L29) 64066597
rpsQ (30S ribosomal protein S17) 65976851
rplN (50S ribosomal protein L14) 70177388
rplX (50S ribosomal protein L24) 73997713
rplE (50S ribosomal protein L5) 77288267
rpsN (30S ribosomal protein S14) 82828587
rpsH (30S ribosomal protein S8) 86219013
rplF (50S ribosomal protein L6) 90269559
rplR (50S ribosomal protein L18) 95699922
rpsE (30S ribosomal protein S5) 993710440
rpmD (50S ribosomal protein L30) 1044410623
rplO (50S ribosomal protein L15) 1062711061
secY_S 1106912400
rpmJ (50S ribosomal protein L36) 1243412550
rpsM (30S ribosomal protein S13) 1269713053
rpsK (30S ribosomal protein S11) 1307013459
rpsD (30S ribosomal protein S4) 1349314113
KP1_5015_S 1413915128
rplQ (50S ribosomal protein L17) 1516915555
KP1_5012_S 1566416032
def_S 2098621495
smf_S 2162422748
KP1_5003_S 2272023193
yrdD_S 2322023762
yrdC_S 2372224339
aroE_S 2434325161
KP1_4999_S 2515825415
yrdA_S 2539125945
1081379 Illumina contig_0036 25818
1081365 Illumina contig_0037 21295
1081418Illuminacontig_003819996yedI_S 4241335 EMBL GBK
KP1_3554_S 34303654
KP1_3553_S 37853976
rcsA_S 40094632
KP1_3551_S 50085439
dapA4_S 1603716918
KP1_3538_S 1701717685
tyrP_S 1771018921
KP1_3536_S 1911319352
ftnA_S 1938819885
1081377Illuminacontig_001917775efp_S 18622428 EMBL GBK
ecnA_S 25022633
ecnB_S 27932939
sugE_S 30833400
blc_S 33973930
frdD_S 40444433
1081387 Illumina contig_0039 17511
1081392 Illumina contig_0040 10383
1081376 Illumina contig_0044 3830
1081396 Illumina contig_0045 2975
1081410 Illumina contig_0042 1742
1081409 Illumina contig_0041 1706
1081386 Illumina contig_0043 1199
1081373 Illumina contig_0046 1199
1081400 Illumina contig_0047 802
1081407 Illumina contig_0048 610
1081381 Illumina contig_0049 551
1081399 Illumina contig_0050 464
1081403 Illumina contig_0051 457
1081382 Illumina contig_0052 371
1081372 Illumina contig_0053 365
1081416 Illumina contig_0054 304
1081364 Illumina contig_0055 253