Sequence bin for SB6448

Contig summary statistics

Contigs
46
Total length
5,467,119
Minimum length
224
Maximum length
685,202
Mean length
118,851
N50
345,910
L50
6
N90
83,339
L90
22
N95
65,674
L95
25

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1080840Illuminacontig_0001685202yedI_S 44145325 EMBL GBK
KP1_3554_S 74207644
KP1_3553_S 77757966
rcsA_S 79998622
KP1_3551_S 89969427
dapA4_S 2128822169
KP1_3538_S 2226022928
tyrP_S 2295624167
KP1_3536_S 2435824597
ftnA_S 2463425131
ruvA_S 5172852339
ruvB_S 5234853358
znuB_S 5342254207
znuC_S 5420754959
KP1_3501_S 5599757316
msbB_S 5743458405
purT_S 7076971947
yebG_S 7208372430
KP1_3490_S 7257273234
ptrB_S 7335575415
exoX_S 7541976078
holE_S 7615776387
KP1_3486_S 7649276875
KP1_3451_S 119598119942
yeaZ_S 122130122825
yeaY_S 122864123445
fadD_S 123651125336
minE_S 126610126879
minD_S 126883127695
minC_S 127719128420
KP1_3442_S 128508128828
ycgM_S 128845129504
KP1_3440_S 129599130045
prfA_S 208908209990
hemK_S 209990210838
ychQ_S 210838211230
kdsA_S 212086212940
chaA_S 213028214128
chaB_S 214392214622
chaC_S 214759215439
tonB 267677268090
KP1_3291_S 269291269575
pfkB_S 269668270600
KP1_3289_S 270955271713
rpmI (50S ribosomal protein L35) 275221275418
rplT (50S ribosomal protein L20) 275469275825
ydhO_S 502156503028
KP1_3065_S 503369503716
gloA_S 504549504956
nemA_S 505035506132
ydhM_S 506186506785
anmK_S 514858515955
KP1_3049_S 516048516371
pdxH_S 516429517085
tyrS_S 517210518484
pdxY_S 518545519405
gst_S 519448520053
1080823Illuminacontig_0002512730dkgB_S 5751378 EMBL GBK
yafC_S 14242329
KP1_1068_S 37184524
yafE_S 46125382
yafP_S 2782228274
pepD_S 2831729774
gpt_S 3003230490
frsA_S 3059631840
crl_S 3189832296
phoE 5706857487
KP1_1206_S 123873124775
KP1_1207_S 125044125685
KP1_1209_S 125871126416
KP1_1211_S 128369129235
KP1_1227_S 139999140364
KP1_1228_S 140389141084
tsx_S 141127142011
yajI_S 142312142851
nrdR_S 142999143448
thiJ_S 153426154025
apbA_S 153982154893
KP1_1246_S 155018155602
yajR_S 155645157009
KP1_1248_S 157169158347
KP1_1251_S 160052160870
tig_S 175318176616
clpP_S 176926177549
clpX_S 177800179074
lon_S 179150181612
hupB_S 181822182094
ppiD_S 182309184183
KP1_1275_S 184332184700
ptsG_S 213218213532
lacI_S 215211216281
rpmE (50S ribosomal protein L31) 216398216661
rpmE2_S 216398216661
rpmJ (50S ribosomal protein L36) 216661216801
adk_S 238155238799
hemH_S 238928239890
gsk_S 239954241258
ybaL_S 241294242970
fsr_S 243196244416
betA_S 391248392957
betB_S 392926394398
betT_S 395128397161
ykfE_S 397208397735
KP1_1607_S 475615476412
dcuC_S 476505477878
cspE_S 478846479139
KP1_1612_S 479206479589
ybeM_S 479679480467
tatE_S 480712480918
lipA_S 481119482084
ybeF_S 482265483269
KP1_1623_S 490028490495
KP1_1624_S 490499490816
nadD_S 491741492394
holA_S 492384493406
rlpB_S 493415494005
1080820Illuminacontig_0006445358KP1_2532_S 6964469979 EMBL GBK
ydgB_S 6997670698
ydgI_S 7073572117
KP1_2535_S 7229573245
KP1_2536_S 7324273424
blaLEN (LEN beta-lactamase) 176980177837
KP1_2672_S 209644210588
KP1_2673_S 210734211216
yneJ_S 211170212048
yneI_S 212647213540
yneH_S 213622214548
KP1_2697_S 227553228224
KP1_2700_S 229827230855
KP1_2702_S 231424231735
KP1_2703_S 231913232668
1080836Illuminacontig_0007414442ycfW_S 1016511409 EMBL GBK
ycfV_S 1140912110
ycfU_S 1210313311
mfd_S 1360717053
ycfS_S 1721718176
ycfQ_S 1881219447
KP1_2092_S 2767928035
ptsG2_S 2829729730
ycfH_S 3002730821
holB_S 3083231836
tmk_S 3183332474
yceG_S 3246433486
pabC_S 3348834297
fabF_S 3442335664
fabG_S 3620136935
fabD_S 3694837877
fabH_S 3789338846
plsX_S 3890139998
rpmF (50S ribosomal protein L32) 4020240375
KP1_2077_S 4039240913
yceF_S 4105541639
mdoC_S 6706468224
KP1_2048_S 6825968852
KP1_2047_S 6891969464
ycdZ_S 6959970081
ycdY_S 7018570739
KP1_2044_S 7076271499
kfuC 131293132321
kfuB 132323133897
kfuA 133919134935
pyrD_S 168428169465
ssuE_S 169687170262
ssuA_S 170255171217
ssuD_S 171214172359
ssuC_S 172370173161
KP1_1916_S 196522197751
msbA_S 198783200531
ihfB_S 203038203325
rpsA (30S ribosomal protein S1) 203477205150
ybjE_S 247182248081
hcp_S 248225249877
hcr_S 249888250856
KP1_1855_S 265931266647
KP1_1853_S 267895268383
potI_S 268441269328
potH_S 269283270236
ybiR_S 319972321084
mntR_S 321081321554
KP1_1803_S 321740321865
ybiP_S 322125323714
ompX_S 323805324320
ybiF_S 324672325559
dps_S 325797326300
glnH_S 326731327477
KP1_1734_S 389496390419
KP1_1732_S 391524391892
KP1_1731_S 391975392529
KP1_1730_S 392568393302
KP1_1729_S 393457394668
KP1_1728_S 394999395244
KP1_1727_S 395370395675
KP1_1726_S 395727395993
ybhE_S 396101397096
ybhA_S 397325398143
1080826Illuminacontig_0008412028celC_S 265724266071 EMBL GBK
celA_S 267631267951
osmE_S 268230268568
nadE_S 268851269678
spy_S 270729271211
KP1_2225_S 300208300552
KP1_2224_S 300649300927
yeaA_S 300971301384
gapA 301965302414
KP1_2220_S 302792303676
yeaE_S 303732304616
1080817Illuminacontig_0004345910epd_S 4891517 EMBL GBK
pgk_S 15572720
fbaA_S 28183897
yggB_S 40894946
yggA_S 50985733
yggE_S 58236590
KP1_4633_S 1087111200
KP1_4632_S 1136111945
pepP_S 1196913285
KP1_4629_S 1447115673
KP1_4618_S 2692227650
KP1_4617_S 2770128012
yqfA_S 2817628835
KP1_4613_S 3022030486
KP1_4612_S 3046730877
fldB_S 3088431405
xerD_S 3150632402
dsbC_S 3242533138
mrkA 8723587843
mrkB 8793988640
mrkC 8865291138
mrkD 9112992124
mrkF 9213892773
mrkJ 9280993525
mrkI 9366994253
mrkH 9425994963
KP1_4524_S 120486121886
KP1_4523_S 121894123321
KP1_4521_S 123389124162
KP1_4520_S 124159124638
galR_S 124599125615
ygdP_S 133444133974
ptsP_S 133987136233
lgt_S 136479137354
thyA_S 137361138155
ppdA_S 138428138895
argA_S 152543153874
amiC_S 154066155355
cobD_S 155373156449
pduX_S 156453157355
pduW_S 157411158625
KP1_4457_S 183304184029
KP1_4456_S 184026184811
KP1_4455_S 184822185616
KP1_4453_S 186323187060
KP1_4452_S 187062187343
cbiQ_S 187330188007
1080827Illuminacontig_0013234943yicE_S 18423242 EMBL GBK
gltS_S 38904720
glpK_S 48356346
glpF_S 63687219
KP1_5367_S 76627907
sbp_S 80599048
rpmB (50S ribosomal protein L28) 4002540261
rpmG (50S ribosomal protein L33) 4028240449
KP1_5309_S 6435765313
KP1_5307_S 6531766588
yibO_S 6659868223
yibN_S 6838868819
grxC_S 6892469175
secB_S 6923669703
KP1_5262_S 120436121146
tkrA_S 121255122226
KP1_5260_S 122251123531
KP1_5259_S 123636124571
KP1_5258_S 124575125324
KP1_5213_S 179703180734
KP1_5210_S 182653183222
prlC_S 191020193062
KP1_5202_S 193013193822
yhiP_S 193968195440
uspA_S 195697196134
yhiO_S 196517196852
pitA_S 196912198408
1080850Illuminacontig_0015187059yejE_S 1069711722 EMBL GBK
KP1_3844_S 1331713661
bcr_S 1399215188
rsuA_S 1518515904
KP1_3852_S 2058621221
KP1_3853_S 2126422025
yejK_S 2204523052
KP1_3855_S 2323923466
yejM_S 2348525245
nuoF_S 9258993926
nuoE_S 9392394423
nuoC_S 9442696234
nuoB_S 9632296996
nuoA_S 9701297458
yfcG_S 111498112127
folX_S 112193112555
accD_S 123579124562
dedA_S 124686125345
truA_S 125372126184
KP1_3958_S 126184127197
pdxB_S 127261128397
KP1_3960_S 128381128509
flk_S 128508129488
KP1_3965_S 140319140600
yfcM_S 140632141180
yfcA_S 141180141989
mepA_S 141989142813
aroC_S 142816143904
1080837Illuminacontig_0011172802hfq_S 77488056 EMBL GBK
hflX_S 81329412
hflK_S 947810740
hflC_S 1074311747
KP1_0445_S 1183012171
KP1_0446_S 1234412541
KP1_0467_S 2931529590
rpsF (30S ribosomal protein S6) 2993230327
priB_S 3048030647
rpsR (30S ribosomal protein S18) 3065230879
rplI (50S ribosomal protein L9) 3092131370
KP1_0513_S 7390274546
KP1_0514_S 7466075793
KP1_0515_S 7577776895
KP1_0517_S 7689277632
KP1_0567_S 121961122785
KP1_0568_S 122796123683
KP1_0569_S 123673124557
yjgB_S 124688125707
silA 161398164544
silR 167783168463
1080825Illuminacontig_0016171672rpsT (30S ribosomal protein S20) 1169811961 EMBL GBK
thrB_S 2739328322
thrA_S 2832430828
lasT_S 3114831834
arcA_S 3246733183
creC_S 3466536089
creB_S 3608936778
yjjK_S 4218743854
nadR_S 4403045262
sms_S 4528446666
serB_S 4667647668
smp_S 4775248399
lplA_S 4839949415
KP1_0801_S 4950550224
deoB_S 5032751550
deoA_S 5160352925
prfC_S 5737558964
yjjG_S 5905559732
rimI_S 5974760193
holD_S 6016260575
mtr_S 6198662339
ycdT_S 6249063536
fhuF_S 6364864436
KP1_0776_S 6824869129
KP1_0775_S 6914670330
yjjP_S 7061271388
yjjB_S 7136471852
dnaT_S 7195672495
dnaC_S 7249873235
yjjA_S 7330173795
1080813Illuminacontig_0017162890KP1_4022_S 1958420483 EMBL GBK
KP1_4023_S 2057821153
KP1_4024_S 2121521664
ypeA_S 2165122091
KP1_4027_S 2209822238
amiA_S 2228823160
hemF_S 2316024059
hscB_S 112400112915
iscA_S 112990113313
KP1_4113_S 113331113717
iscS_S 113744114958
iscR_S 115138115629
yfhQ_S 115882116616
suhB_S 116737117540
glyA_S 123445124698
hmpA_S 125024126214
KP1_4132_S 126289126627
yfhA_S 126693128030
yfhG_S 128017128724
yfhK_S 128733130172
nadB_S 148807150426
yfiC_S 150411151169
srmB_S 151279152610
yfiD_S 152656153039
ung_S 153351154040
1080816Illuminacontig_0018153398ispC_S 2893130133 EMBL GBK
frr_S 3036130918
pyrH_S 3106931794
tsf_S 3194232793
rpsB (30S ribosomal protein S2) 3291333638
map_S 3396234756
sfsA_S 7796678682
dksA_S 7882779300
yadB_S 7936080241
folK_S 8169582174
KP1_0965_S 8446185708
yadI_S 8577386213
yadH_S 8633687106
yadG_S 8710388029
hpt_S 8893489482
KP1_0946_S 104040104855
KP1_0945_S 104900105184
lpdA_S 105349106776
KP1_0936_S 114667116073
KP1_0935_S 116073117023
ampE_S 117143117997
ampD_S 117994118557
nadC_S 118691119584
ppdD_S 119766120197
guaC_S 122825123868
KP1_0927_S 123925124056
coaE_S 124212124832
KP1_0925_S 124832125575
yacG_S 125585125779
mutT_S 125832126224
ftsI_S 144187145953
ftsL_S 145969146334
mraW_S 146331147272
KP1_0903_S 147275147769
fruR_S 148374149378
ilvH_S 149559150080
ilvI_S 150053151777
1080822Illuminacontig_0019150687KP1_4812_S 4524545745 EMBL GBK
ygjR_S 4581946808
ygjT_S 4708048051
ygjU_S 4828349530
KP1_4816_S 4954650100
KP1_4822_S 5684357226
KP1_4823_S 5737657744
KP1_4824_S 5779058095
KP1_4825_S 5809858496
KP1_4826_S 5849358789
KP1_4861_S 7312173507
yraO_S 7349774123
yraP_S 7413374708
KP1_4865_S 7483075870
yhbO_S 7659377258
KP1_4868_S 7722077663
KP1_4870_S 7799078493
KP1_4871_S 7848779011
yhbU_S 7923380228
yhbV_S 8021981112
yhbW_S 8125682263
rpsO (30S ribosomal protein S15) 8917689445
infB 9208692403
rpmA (50S ribosomal protein L27) 110564110821
rplU (50S ribosomal protein L21) 110842111153
yrbI_S 119918120484
KP1_4921_S 120481121056
yhbN_S 121025121570
yhbG_S 121577122302
rpoN_S 122350123783
yhbH_S 123806124093
ptsN_S 124164124652
KP1_4927_S 124698125552
ptsO_S 125549125821
rpsI (30S ribosomal protein S9) 143594143986
rplM (50S ribosomal protein L13) 144002144430
1080843Illuminacontig_0020136083rpmH (50S ribosomal protein L34) 8632386463 EMBL GBK
atpF_S 114712115176
atpE_S 115233115472
atpB_S 115521116336
atpI_S 116344116796
gidB_S 117341117964
rbsC_S 129655130620
rbsB_S 130648131538
rbsK_S 131642132571
yieP_S 134974135675
1080842Illuminacontig_0005131794KP1_4281_S 48876563 EMBL GBK
emrA_S 82549426
emrR_S 955210052
ygaH_S 1017310508
smpB_S 105153105635
KP1_4197_S 105746106222
KP1_4196_S 106212106502
smpA_S 106572106913
ppnK_S 108809109687
grpE_S 109812110402
rpsP (30S ribosomal protein S16) 114419114667
rplS (50S ribosomal protein L19) 116073116420
1080815Illuminacontig_0014106543asd_S 2135722511 EMBL GBK
glgB_S 2275024936
glgX_S 2502926909
glgC_S 2699028285
glgA_S 2828529718
aroK_S 7087671397
aroB_S 7145372547
dam_S 7400074827
rpe_S 7484575522
gph_S 7551576276
trpS_S 7626977273
cysG_S 7734878721
nirD_S 7887479200
yhfC_S 8329884485
ppiA_S 8476385332
KP1_5076_S 8543985606
KP1_5075_S 8559686198
pabA_S 8623186794
crp_S 9022590857
KP1_5070_S 9116491568
prkB_S 9162492493
KP1_5068_S 9253092748
yheT_S 9274593767
yheS_S 9396995873
rpsL (30S ribosomal protein S12) 102684103058
rpsG (30S ribosomal protein S7) 103155103625
1080831 Illumina contig_0021 104791
1080814Illuminacontig_0022102308KP1_4652_S 991110411 EMBL GBK
endA_S 1044911213
KP1_4654_S 1123012036
gshB_S 1205713007
KP1_4657_S 1318213745
yqgF_S 1374514161
KP1_4731_S 7233873009
ygiC_S 7301574175
ygiD_S 7421675007
ygiE_S 7519475964
ribB_S 7602676679
uppP_S 8557986400
folB_S 8659886984
KP1_4750_S 8708987706
ureD_S 8810488928
ureA_S 8893889240
ureB_S 8925089570
rpsU (30S ribosomal protein S21) 9611096325
1080854Illuminacontig_000999869metA_S 9011830 EMBL GBK
aceA_S 37575076
aceK_S 51796963
iclR_S 70147940
pgi 2678027211
KP1_0299_S 5299453410
KP1_0300_S 5341453770
uvrA_S 5377156596
ssb_S 5684857375
1080844Illuminacontig_002398401polA_S 46897481 EMBL GBK
engB_S 78298461
KP1_0026_S 90469552
hemN_S 974111114
glnG_S 1137512784
glnL_S 1279313842
glnA_S 1403115440
bipA_S 1581917642
rhaD_S 4734048170
rhaA_S 4832249587
rhaB_S 4957851044
rhaS_S 5135552191
rhaR_S 5226553110
rhaT_S 5314354177
sodA_S 5446055086
KP1_0077_S 5515955833
cpxA_S 5589757270
cpxR_S 5726757965
cpxP_S 5811558618
rpmE (50S ribosomal protein L31) 6911769329
yijC_S 9289793529
KP1_0118_S 9354593904
trmA_S 9395895058
KP1_0120_S 9526095382
btuB_S 9542597281
KP1_0122_S 9722698077
1080812Illuminacontig_002486442fadA_S 64887651 EMBL GBK
fre_S 77588459
rfaH_S 1016310651
tatD_S 1064811439
tatC_S 1148412263
tatB_S 1226612802
ubiB_S 1318714827
KP1_0193_S 1482415429
ubiE_S 1544316198
yigN_S 1626917717
udp_S 1785318614
metR_S 2227123224
yigM_S 2311224011
pldB_S 2494525937
rhtB_S 2604726667
yigB_S 3635537071
xerC_S 3707137970
KP1_0169_S 3796738674
dapF_S 3867139498
KP1_0167_S 3953139734
cyaY_S 3987340193
ilvY_S 7544976423
ilvA_S 7642077907
ilvD_S 7796779817
ilvE_S 7987880807
ilvM_S 8082781084
1080819Illuminacontig_001083339KP1_0375_S 3022330543 EMBL GBK
cbpA_S 3052831445
KP1_0378_S 3159132289
KP1_0379_S 3245133284
hmsS_S 3333133780
efp_S 6756068126
ecnA_S 6820068331
ecnB_S 6849068636
sugE_S 6878069097
blc_S 6909469627
frdD_S 6974170130
1080838Illuminacontig_002570273mglA_S 4676248282 EMBL GBK
mglB_S 4840149399
galS_S 4969650718
folE_S 5204752715
1080846Illuminacontig_002668912yabF_S 2061221145 EMBL GBK
kefC_S 2113823003
folA_S 2317823657
apaH_S 2395024798
apaG_S 2480325180
ksgA_S 2518326004
pdxA_S 2600126990
araD_S 4282343518
araA_S 4365645158
araB_S 4516946878
araC_S 4721548060
yabI_S 4818948956
tbpA_S 5121452158
yabN_S 5248754142
KP1_0882_S 5422454382
setA_S 5465455838
gudP_S 5588357193
1080833 Illumina contig_0027 65674
1080847Illuminacontig_000361705nagD_S 21862938 EMBL GBK
nagC_S 30674287
nagA_S 42965444
nagB_S 55586358
nagE_S 66748629
glnS_S 880810475
KP1_1656_S 1181512315
KP1_1657_S 1236312695
fur_S 1777918231
fldA_S 1852319122
KP1_1661_S 1920519567
ybfF_S 1963220405
KP1_1663_S 2044521137
cydA_S 5228853859
cydB_S 5387555014
KP1_1697_S 5570856112
tolQ_S 5610956801
tolR_S 5680557233
1080834Illuminacontig_002846367wzi (Wzi outer membrane protein of cps cluster) 48665312 EMBL GBK
1080852Illuminacontig_002944291mdh 50815557 EMBL GBK
KP1_4977_S 2476024951
KP1_4978_S 2516526181
KP1_4980_S 2701327465
accB_S 2748827955
accC_S 2796629315
KP1_4984_S 2942629668
prmA_S 3112132002
KP1_4987_S 3197232202
1080828Illuminacontig_003034457rplK (50S ribosomal protein L11) 15762004 EMBL GBK
rplA (50S ribosomal protein L1) 20082712
rplJ (50S ribosomal protein L10) 31273624
rplL (50S ribosomal protein L7/L12) 36914056
rpoB 60376537
rsd_S 2276923266
nudC_S 2336024133
hemE_S 2417425238
nfi_S 2525125922
KP1_0239_S 2596526555
KP1_0241_S 2674227014
KP1_0242_S 2702127722
zraP_S 2772628163
1080851Illuminacontig_003126276yrdA_S 305859 EMBL GBK
KP1_4999_S 8351092
aroE_S 10891907
yrdC_S 19112528
yrdD_S 24883030
KP1_5003_S 30573530
smf_S 35024626
def_S 47555264
KP1_5012_S 1021810586
rplQ (50S ribosomal protein L17) 1069511081
KP1_5015_S 1112212111
rpsD (30S ribosomal protein S4) 1213712757
rpsK (30S ribosomal protein S11) 1279113180
rpsM (30S ribosomal protein S13) 1319713553
rpmJ (50S ribosomal protein L36) 1370013816
secY_S 1385015181
rplO (50S ribosomal protein L15) 1518915623
rpmD (50S ribosomal protein L30) 1562715806
rpsE (30S ribosomal protein S5) 1581016313
rplR (50S ribosomal protein L18) 1632816681
rplF (50S ribosomal protein L6) 1669117224
rpsH (30S ribosomal protein S8) 1723717629
rpsN (30S ribosomal protein S14) 1766317968
rplE (50S ribosomal protein L5) 1798318522
rplX (50S ribosomal protein L24) 1853718851
rplN (50S ribosomal protein L14) 1886219233
rpsQ (30S ribosomal protein S17) 1939919653
rpmC (50S ribosomal protein L29) 1965319844
rplP (50S ribosomal protein L16) 1984420254
rpsC (30S ribosomal protein S3) 2026720965
rplV (50S ribosomal protein L22) 2098321315
rpsS (30S ribosomal protein S19) 2133021608
rplB (50S ribosomal protein L2) 2162522446
rplW (50S ribosomal protein L23) 2246422766
rplD (50S ribosomal protein L4) 2276323368
rplC (50S ribosomal protein L3) 2337924008
rpsJ (30S ribosomal protein S10) 2404124352
1080832 Illumina contig_0032 20918
1080841 Illumina contig_0034 9354
1080845 Illumina contig_0035 3649
1080855 Illumina contig_0012 2934
1080853 Illumina contig_0033 2778
1080824 Illumina contig_0036 2755
1080811 Illumina contig_0037 1643
1080856 Illumina contig_0038 1563
1080830 Illumina contig_0039 1458
1080835 Illumina contig_0040 900
1080848 Illumina contig_0041 551
1080849 Illumina contig_0042 524
1080829 Illumina contig_0043 521
1080821 Illumina contig_0044 363
1080839 Illumina contig_0045 338
1080818 Illumina contig_0046 224