Sequence bin for SB6446

Contig summary statistics

Contigs
62
Total length
5,331,751
Minimum length
306
Maximum length
342,792
Mean length
85,996
N50
148,956
L50
11
N90
76,705
L90
32
N95
46,259
L95
36

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1080712Illuminacontig_0002342792cbiQ_S 163403164080 EMBL GBK
KP1_4452_S 164067164348
KP1_4453_S 164350165087
KP1_4455_S 165794166588
KP1_4456_S 166599167384
KP1_4457_S 167381168106
pduW_S 192784193998
pduX_S 194054194956
cobD_S 194960196036
amiC_S 196054197343
argA_S 197535198866
ppdA_S 212514212981
thyA_S 213254214048
lgt_S 214055214930
ptsP_S 215176217422
ygdP_S 217435217965
galR_S 225794226810
KP1_4520_S 226771227250
KP1_4521_S 227247228020
KP1_4523_S 228088229515
KP1_4524_S 229523230923
mrkH 256446257150
mrkI 257156257740
mrkF 258636259271
mrkB 262769263470
mrkA 263566264174
dsbC_S 309215309928
xerD_S 309951310847
fldB_S 310948311469
KP1_4612_S 311476311886
KP1_4613_S 311867312133
yqfA_S 313778314437
KP1_4617_S 314601314912
KP1_4618_S 314963315691
KP1_4629_S 326854328056
pepP_S 329242330558
KP1_4632_S 330582331166
KP1_4633_S 331327331656
yggE_S 336230336997
yggA_S 337087337722
yggB_S 337874338731
fbaA_S 338923340002
pgk_S 340100341263
epd_S 341303342331
1080737Illuminacontig_0005335589kfuB 5684058414 EMBL GBK
kfuA 5843659452
pyrD_S 8992290959
ssuE_S 9118191756
ssuA_S 9174992711
ssuD_S 9270893853
ssuC_S 9386494655
KP1_1916_S 118015119244
msbA_S 120276122024
ihfB_S 124531124818
rpsA (30S ribosomal protein S1) 124970126643
ybjE_S 167288168187
hcp_S 168331169983
hcr_S 169994170962
KP1_1855_S 186037186753
KP1_1853_S 188001188489
potH_S 189389190342
ybiR_S 240206241318
mntR_S 241315241788
KP1_1803_S 241974242099
ybiP_S 242359243948
ompX_S 244039244554
ybiF_S 244906245793
dps_S 246031246534
glnH_S 246965247711
KP1_1734_S 310485311408
KP1_1732_S 312513312881
KP1_1731_S 312964313518
KP1_1730_S 313556314290
KP1_1729_S 314445315656
KP1_1728_S 315986316231
KP1_1727_S 316357316662
KP1_1726_S 316714316980
ybhE_S 317089318084
ybhA_S 318313319131
1080718Illuminacontig_0008303471phoE 53835802 EMBL GBK
KP1_1206_S 7221673118
KP1_1207_S 7338774028
KP1_1209_S 7421474759
KP1_1211_S 7671277578
KP1_1227_S 8834288707
KP1_1228_S 8873289427
tsx_S 8947090354
yajI_S 9065691195
nrdR_S 9134391792
thiJ_S 101770102369
apbA_S 102326103237
KP1_1246_S 103362103946
yajR_S 103989105353
KP1_1248_S 105513106691
KP1_1251_S 108396109214
tig_S 123662124960
clpP_S 125270125893
clpX_S 126144127418
lon_S 127494129956
hupB_S 130166130438
ppiD_S 130653132527
KP1_1275_S 132676133044
ptsG_S 161567161881
lacI_S 163560164630
rpmE (50S ribosomal protein L31) 164747165010
rpmE2_S 164747165010
rpmJ (50S ribosomal protein L36) 165010165150
adk_S 186621187265
hemH_S 187394188356
gsk_S 188420189724
ybaL_S 189760191436
fsr_S 191662192882
1080753Illuminacontig_0009278593blaLEN (LEN beta-lactamase) 7205872915 EMBL GBK
KP1_2672_S 106119107063
KP1_2673_S 107209107691
yneJ_S 107645108523
yneI_S 109122110015
yneH_S 110097111023
KP1_2697_S 124030124701
KP1_2700_S 126304127332
KP1_2702_S 127901128212
KP1_2703_S 128390129145
1080729Illuminacontig_0007254786celC_S 127647127994 EMBL GBK
celA_S 129554129874
osmE_S 130153130491
nadE_S 130774131601
spy_S 132652133134
KP1_2225_S 162129162473
KP1_2224_S 162570162848
yeaA_S 162892163305
gapA 163886164335
KP1_2220_S 164713165597
yeaE_S 165652166536
1080744Illuminacontig_0003223463yicE_S 1308814488 EMBL GBK
gltS_S 1513615966
glpK_S 1608117592
glpF_S 1761418465
KP1_5367_S 1890819153
sbp_S 1930520294
rpmB (50S ribosomal protein L28) 5118951425
rpmG (50S ribosomal protein L33) 5144651613
KP1_5309_S 7551776473
KP1_5307_S 7647777748
yibO_S 7775879383
yibN_S 7954879979
grxC_S 8008480335
secB_S 8039680863
KP1_5262_S 123058123768
tkrA_S 123877124848
KP1_5260_S 124873126153
KP1_5259_S 126258127193
KP1_5258_S 127197127946
KP1_5213_S 182325183356
KP1_5210_S 185265185834
prlC_S 193633195675
KP1_5202_S 195626196435
yhiP_S 196581198053
uspA_S 198310198747
yhiO_S 199130199465
pitA_S 199525201021
1080702Illuminacontig_0014222733yabF_S 2116921702 EMBL GBK
kefC_S 2169523560
folA_S 2373524214
apaH_S 2450725355
apaG_S 2536025737
ksgA_S 2574026561
pdxA_S 2655827547
araD_S 4333644031
araA_S 4416945671
araB_S 4568247391
araC_S 4772848573
yabI_S 4870249469
tbpA_S 5172752671
yabN_S 5300054655
KP1_0882_S 5473754895
setA_S 5516756351
gudP_S 5639657706
ilvI_S 7102872752
ilvH_S 7272573246
fruR_S 7342774431
KP1_0903_S 7503675530
mraW_S 7553376474
ftsL_S 7647176836
ftsI_S 7685278618
mutT_S 9659096982
yacG_S 9703597229
KP1_0925_S 9723997982
coaE_S 9798298602
KP1_0927_S 9875898889
guaC_S 9894699989
ppdD_S 102617103048
nadC_S 103230104123
ampD_S 104257104820
ampE_S 104817105671
KP1_0935_S 105792106742
KP1_0936_S 106742108148
lpdA_S 116039117466
KP1_0945_S 117631117915
KP1_0946_S 117960118775
hpt_S 133324133872
yadG_S 134777135703
yadH_S 135700136470
yadI_S 136593137033
KP1_0965_S 137098138345
folK_S 140632141111
yadB_S 142565143446
dksA_S 143506143979
sfsA_S 144124144840
map_S 187943188737
rpsB (30S ribosomal protein S2) 189061189786
tsf_S 189906190757
pyrH_S 190905191630
frr_S 191781192338
ispC_S 192566193768
1080747Illuminacontig_0015221559ydhO_S 4027641148 EMBL GBK
KP1_3065_S 4148941836
gloA_S 4266943076
nemA_S 4315544252
ydhM_S 4430644905
anmK_S 5297854075
KP1_3049_S 5416854491
pdxH_S 5454955205
tyrS_S 5533056604
pdxY_S 5666557525
gst_S 5756858173
1080711Illuminacontig_0019218023nuoA_S 20142460 EMBL GBK
nuoB_S 24763150
nuoC_S 32385046
nuoE_S 50495549
nuoF_S 55466883
yejM_S 7427076030
KP1_3855_S 7604976276
yejK_S 7646377470
KP1_3853_S 7749078251
KP1_3852_S 7829478929
rsuA_S 8361184330
bcr_S 8432785523
KP1_3844_S 8585486198
yejE_S 8779388818
folE_S 117173117841
galS_S 119170120192
mglB_S 120489121487
mglA_S 121606123126
wzi (Wzi outer membrane protein of cps cluster) 211031211477
1080738Illuminacontig_0020170353rpsT (30S ribosomal protein S20) 1187912142 EMBL GBK
thrB_S 2757428503
thrA_S 2850531009
lasT_S 3132932015
arcA_S 3264833364
creC_S 3484636270
creB_S 3627036959
yjjK_S 4236844035
nadR_S 4421145443
sms_S 4546546847
serB_S 4685747849
smp_S 4793348580
lplA_S 4858049596
KP1_0801_S 4967750396
deoB_S 5049951722
deoA_S 5177553097
prfC_S 5754759136
yjjG_S 5922759904
rimI_S 5991960365
holD_S 6033460747
mtr_S 6215862511
ycdT_S 6266263708
fhuF_S 6382064608
KP1_0776_S 6842069301
KP1_0775_S 6931870502
yjjP_S 7078471560
yjjB_S 7153672024
dnaT_S 7212772666
dnaC_S 7266973406
yjjA_S 7347273966
1080724 Illumina contig_0021 148956
1080701Illuminacontig_0022141412ftnA_S 233730 EMBL GBK
KP1_3536_S 7671006
tyrP_S 11972408
KP1_3538_S 24343102
dapA4_S 31934074
KP1_3551_S 1593516366
rcsA_S 1674117364
KP1_3553_S 1739717588
KP1_3554_S 1771917943
yedI_S 2003820949
1080740Illuminacontig_0023134391chaC_S 4864949329 EMBL GBK
chaB_S 4946649696
chaA_S 4996051060
kdsA_S 5114852002
ychQ_S 5285853250
hemK_S 5325054098
prfA_S 5409855180
1080699Illuminacontig_0024132094KP1_4812_S 1437114871 EMBL GBK
ygjR_S 1494515934
ygjT_S 1620617177
ygjU_S 1740918656
KP1_4816_S 1867219226
KP1_4822_S 2597026353
KP1_4823_S 2650326871
KP1_4824_S 2691727222
KP1_4825_S 2722527623
KP1_4826_S 2762027916
KP1_4861_S 5524155627
yraO_S 5561756243
yraP_S 5625356828
KP1_4865_S 5695057990
yhbO_S 5871359378
KP1_4868_S 5934059783
KP1_4870_S 6011060613
KP1_4871_S 6060761131
yhbU_S 6135362348
yhbV_S 6233963232
yhbW_S 6337664383
rpsO (30S ribosomal protein S15) 7129871567
infB 7420874525
rpmA (50S ribosomal protein L27) 9268692943
rplU (50S ribosomal protein L21) 9296493275
yrbI_S 102040102606
KP1_4921_S 102603103178
yhbN_S 103147103692
yhbG_S 103699104424
rpoN_S 104472105905
yhbH_S 105928106215
ptsN_S 106286106774
KP1_4927_S 106820107674
ptsO_S 107671107943
rpsI (30S ribosomal protein S9) 125716126108
rplM (50S ribosomal protein L13) 126124126552
1080731Illuminacontig_0025128744yieP_S 4091110 EMBL GBK
rbsK_S 35134442
rbsB_S 45465436
rbsC_S 54646429
gidB_S 1811918742
atpI_S 1928719739
atpB_S 1974720562
atpE_S 2061120850
atpF_S 2090721371
rpmH (50S ribosomal protein L34) 4962249762
1080704Illuminacontig_0004121416asd_S 3636537519 EMBL GBK
glgB_S 3775839944
glgX_S 4003741917
glgC_S 4199843293
glgA_S 4329344726
aroK_S 8588386404
aroB_S 8646087554
dam_S 8900789834
rpe_S 8985290529
gph_S 9052291283
trpS_S 9127692280
cysG_S 9235693729
nirD_S 9388294208
yhfC_S 9830699493
ppiA_S 99771100340
KP1_5076_S 100447100614
KP1_5075_S 100604101206
pabA_S 101239101802
crp_S 105233105865
KP1_5070_S 106172106576
prkB_S 106632107501
KP1_5068_S 107538107756
yheT_S 107753108775
yheS_S 108977110881
rpsL (30S ribosomal protein S12) 117692118066
rpsG (30S ribosomal protein S7) 118163118633
1080742Illuminacontig_0026114102rplT (50S ribosomal protein L20) 102381102737 EMBL GBK
rpmI (50S ribosomal protein L35) 102788102985
KP1_3289_S 106493107251
pfkB_S 107606108538
KP1_3291_S 108631108915
tonB 110115110528
1080726Illuminacontig_0027113318KP1_3440_S 1788418330 EMBL GBK
ycgM_S 1842519084
KP1_3442_S 1910119421
minC_S 1950920210
minD_S 2023421046
minE_S 2105021319
fadD_S 2259424279
yeaY_S 2448525066
yeaZ_S 2510525800
KP1_3451_S 2798828332
KP1_3486_S 6179062173
holE_S 6227862508
exoX_S 6258763246
ptrB_S 6325065310
KP1_3490_S 6543166093
yebG_S 6623566582
purT_S 6671867896
msbB_S 8025981230
KP1_3501_S 8134882667
znuC_S 8370584457
znuB_S 8445785242
ruvB_S 8530686316
ruvA_S 8632586936
1080733Illuminacontig_0001108423rplS (50S ribosomal protein L19) 1551215859 EMBL GBK
rpsP (30S ribosomal protein S16) 1726517513
grpE_S 2156622156
ppnK_S 2228123159
smpA_S 2505525396
KP1_4196_S 2546625756
KP1_4197_S 2574626222
smpB_S 2633326815
ygaH_S 9797998314
emrR_S 9843598935
emrA_S 99061100233
KP1_4281_S 101924103600
1080727Illuminacontig_002898476KP1_2532_S 7000670341 EMBL GBK
ydgB_S 7033871060
ydgI_S 7109772479
KP1_2535_S 7265773607
KP1_2536_S 7360473786
1080750Illuminacontig_002997175rpsU (30S ribosomal protein S21) 60376252 EMBL GBK
ureB_S 1279213112
ureA_S 1312213424
ureD_S 1343414258
KP1_4750_S 1465615273
folB_S 1537815764
uppP_S 1596216783
ribB_S 2568326336
ygiE_S 2639827168
ygiD_S 2735528146
ygiC_S 2818729347
KP1_4731_S 2935330024
yqgF_S 8224182657
KP1_4657_S 8265783220
gshB_S 8339584345
KP1_4654_S 8436685172
endA_S 8518985953
KP1_4652_S 8599186491
1080720Illuminacontig_003095737polA_S 47917583 EMBL GBK
engB_S 79308562
KP1_0026_S 91479653
hemN_S 984211215
glnG_S 1147612885
glnL_S 1289413943
glnA_S 1413215541
bipA_S 1592017743
rhaD_S 4744148271
rhaA_S 4842649691
rhaB_S 4968251148
rhaS_S 5145952295
rhaR_S 5236953214
rhaT_S 5324754281
sodA_S 5456555191
KP1_0077_S 5526455938
cpxA_S 5600257375
cpxR_S 5737258070
cpxP_S 5822058723
rpmE (50S ribosomal protein L31) 6921069422
yijC_S 9025090882
KP1_0118_S 9089891257
trmA_S 9131292412
KP1_0120_S 9261492736
btuB_S 9277994617
KP1_0122_S 9456295413
1080749Illuminacontig_003191000ung_S 87429431 EMBL GBK
yfiD_S 974310126
srmB_S 1017211503
yfiC_S 1161312371
nadB_S 1235613975
yfhK_S 3261034049
yfhG_S 3405834765
yfhA_S 3475236089
KP1_4132_S 3615536493
hmpA_S 3656837758
glyA_S 3808439337
suhB_S 4524346046
yfhQ_S 4616746901
iscR_S 4715447645
iscS_S 4782549039
KP1_4113_S 4906649452
iscA_S 4947049793
hscB_S 4986850383
1080719Illuminacontig_001389250KP1_0513_S 3510335747 EMBL GBK
KP1_0514_S 3586136994
KP1_0515_S 3697838096
KP1_0516_S 3700538108
KP1_0517_S 3809338833
KP1_0567_S 8301983843
KP1_0568_S 8385484741
KP1_0569_S 8473185615
yjgB_S 8574686765
1080725Illuminacontig_003286463fadA_S 64887651 EMBL GBK
fre_S 77598460
rfaH_S 1016410652
tatD_S 1064911440
tatC_S 1148512264
tatB_S 1226712803
ubiB_S 1318814828
KP1_0193_S 1482515430
ubiE_S 1544416199
yigN_S 1627017718
udp_S 1785418615
metR_S 2227223225
yigM_S 2311324012
KP1_0183_S 2410124901
pldB_S 2494625938
rhtB_S 2604826668
yigB_S 3636837084
xerC_S 3708437986
KP1_0169_S 3798338690
dapF_S 3868739514
KP1_0167_S 3954739750
cyaY_S 3988940209
ilvY_S 7546476438
ilvD_S 7798279832
ilvE_S 7989380822
ilvM_S 8084281099
1080752Illuminacontig_003386317metA_S 7271656 EMBL GBK
aceA_S 35354854
aceK_S 49576741
iclR_S 67927718
pgi 2574726178
KP1_0299_S 5196352379
KP1_0300_S 5238352739
uvrA_S 5274055565
ssb_S 5581756344
1080734Illuminacontig_003485439KP1_4022_S 1919920098 EMBL GBK
KP1_4023_S 2019320768
KP1_4024_S 2083021279
ypeA_S 2126621706
KP1_4027_S 2171321853
amiA_S 2190322775
hemF_S 2277523674
1080730Illuminacontig_001182803KP1_0375_S 2963629956 EMBL GBK
cbpA_S 2994130858
KP1_0378_S 3100431702
KP1_0379_S 3186432697
hmsS_S 3274433193
efp_S 6688267448
ecnA_S 6752267653
ecnB_S 6781267958
sugE_S 6810168418
blc_S 6841568948
frdD_S 6906269451
1080700Illuminacontig_001780997rlpB_S 1857819168 EMBL GBK
holA_S 1917720199
nadD_S 2018920842
KP1_1624_S 2176722084
KP1_1623_S 2208822555
ybeF_S 2931430318
lipA_S 3049931464
tatE_S 3166531871
ybeM_S 3211632904
KP1_1612_S 3299433377
cspE_S 3344433737
dcuC_S 3470536078
KP1_1607_S 3617136968
1080741Illuminacontig_003580685KP1_2044_S 92259962 EMBL GBK
ycdY_S 998510539
ycdZ_S 1064311125
KP1_2047_S 1126011805
KP1_2048_S 1187212465
mdoC_S 1250013660
yceF_S 3904639630
KP1_2077_S 3977240293
rpmF (50S ribosomal protein L32) 4031040483
plsX_S 4068741784
fabH_S 4183942792
fabD_S 4280843737
fabG_S 4375044484
fabF_S 4502146262
pabC_S 4638847197
yceG_S 4719948221
tmk_S 4821148852
holB_S 4884949853
ycfH_S 4986450658
ptsG2_S 5095552388
KP1_2092_S 5265053006
ycfQ_S 6123961874
ycfS_S 6251063475
mfd_S 6363367079
ycfU_S 6737568583
ycfV_S 6857669277
ycfW_S 6927770521
1080713Illuminacontig_003676720yfcG_S 1203512664 EMBL GBK
folX_S 1273013092
accD_S 2411625099
dedA_S 2522325882
truA_S 2590926721
KP1_3958_S 2672127734
pdxB_S 2779828934
KP1_3960_S 2891829046
flk_S 2904530025
KP1_3965_S 3964039921
yfcM_S 3995340501
yfcA_S 4050141310
mepA_S 4131042134
aroC_S 4213743225
1080703Illuminacontig_001876705ykfE_S 3367734204 EMBL GBK
betT_S 3425136284
betB_S 3701438486
betA_S 3845540164
1080709 Illumina contig_0006 68957
1080714Illuminacontig_001661586tolR_S 44764904 EMBL GBK
tolQ_S 49085600
KP1_1697_S 55976001
cydB_S 66957834
cydA_S 78509421
KP1_1663_S 4045241144
ybfF_S 4118441957
KP1_1661_S 4202242384
fldA_S 4246743066
fur_S 4335843810
KP1_1657_S 4889449226
KP1_1656_S 4927449774
glnS_S 5111552782
nagE_S 5296154916
nagB_S 5523256032
nagA_S 5614657294
nagC_S 5730358523
nagD_S 5865259404
1080698Illuminacontig_003752786crl_S 2083121229 EMBL GBK
frsA_S 2128722531
gpt_S 2263723095
pepD_S 2335324810
yafP_S 2485325305
yafE_S 4774648516
KP1_1068_S 4860449410
yafC_S 5079951704
dkgB_S 5175052553
1080756 Illumina contig_0038 46259
1080722Illuminacontig_003945348mdh 49195395 EMBL GBK
KP1_4977_S 2579325984
KP1_4978_S 2619827214
KP1_4980_S 2804628498
accB_S 2852128988
accC_S 2899930348
KP1_4984_S 3045930701
prmA_S 3215433035
KP1_4987_S 3300533235
1080755Illuminacontig_001238794hfq_S 76667974 EMBL GBK
hflX_S 80509330
hflK_S 939610658
hflC_S 1066111665
KP1_0445_S 1174812089
KP1_0446_S 1226212459
KP1_0467_S 2923529510
rpsF (30S ribosomal protein S6) 2985230247
priB_S 3040030567
rpsR (30S ribosomal protein S18) 3057230799
rplI (50S ribosomal protein L9) 3084131290
1080728Illuminacontig_004035015zraP_S 63236760 EMBL GBK
KP1_0242_S 67647465
KP1_0241_S 74727744
KP1_0239_S 79318521
nfi_S 85649235
hemE_S 924810312
nudC_S 1035311126
rsd_S 1122011717
rpoB 2794928449
rplL (50S ribosomal protein L7/L12) 3043030795
rplJ (50S ribosomal protein L10) 3086231359
rplA (50S ribosomal protein L1) 3177332477
rplK (50S ribosomal protein L11) 3248132909
1080745Illuminacontig_004131355silR 30093689 EMBL GBK
silA 692810074
1080746 Illumina contig_0042 26458
1080721Illuminacontig_004326276yrdA_S 335889 EMBL GBK
KP1_4999_S 8651122
aroE_S 11191937
yrdC_S 19412558
yrdD_S 25183060
KP1_5003_S 30873560
smf_S 35324656
def_S 47855294
KP1_5012_S 1024810616
rplQ (50S ribosomal protein L17) 1072511111
KP1_5015_S 1115212141
rpsD (30S ribosomal protein S4) 1216712787
rpsK (30S ribosomal protein S11) 1282113210
rpsM (30S ribosomal protein S13) 1322713583
rpmJ (50S ribosomal protein L36) 1373013846
secY_S 1388015211
rplO (50S ribosomal protein L15) 1521915653
rpmD (50S ribosomal protein L30) 1565715836
rpsE (30S ribosomal protein S5) 1584016343
rplR (50S ribosomal protein L18) 1635816711
rplF (50S ribosomal protein L6) 1672117254
rpsH (30S ribosomal protein S8) 1726717659
rpsN (30S ribosomal protein S14) 1769317998
rplE (50S ribosomal protein L5) 1801318552
rplX (50S ribosomal protein L24) 1856718881
rplN (50S ribosomal protein L14) 1889219263
rpsQ (30S ribosomal protein S17) 1942919683
rpmC (50S ribosomal protein L29) 1968319874
rplP (50S ribosomal protein L16) 1987420284
rpsC (30S ribosomal protein S3) 2029720995
rplV (50S ribosomal protein L22) 2101321345
rpsS (30S ribosomal protein S19) 2136021638
rplB (50S ribosomal protein L2) 2165522476
rplW (50S ribosomal protein L23) 2249422796
rplD (50S ribosomal protein L4) 2279323398
rplC (50S ribosomal protein L3) 2340924038
rpsJ (30S ribosomal protein S10) 2407124382
1080708 Illumina contig_0010 12440
1080710 Illumina contig_0044 11994
1080732 Illumina contig_0045 9204
1080707 Illumina contig_0046 4696
1080736 Illumina contig_0047 4386
1080743 Illumina contig_0048 2026
1080716 Illumina contig_0049 1938
1080735 Illumina contig_0050 1628
1080739 Illumina contig_0051 1556
1080717 Illumina contig_0052 1179
1080706 Illumina contig_0053 1168
1080754 Illumina contig_0054 911
1080696 Illumina contig_0055 740
1080695 Illumina contig_0056 581
1080723 Illumina contig_0057 561
1080705 Illumina contig_0058 503
1080748 Illumina contig_0059 468
1080697 Illumina contig_0060 335
1080715 Illumina contig_0061 312
1080751 Illumina contig_0062 306