Sequence bin for SB6444

Contig summary statistics

Contigs
55
Total length
5,453,313
Minimum length
296
Maximum length
441,720
Mean length
99,152
N50
179,483
L50
9
N90
64,211
L90
27
N95
41,788
L95
32

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1080625Illuminacontig_0003441720dkgB_S 7471550 EMBL GBK
yafC_S 15962501
KP1_1068_S 38904696
yafE_S 47845554
yafP_S 2758528037
pepD_S 2807929536
gpt_S 2979430252
frsA_S 3035831602
crl_S 3166032058
phoE 6980870227
KP1_1206_S 136626137528
KP1_1207_S 137796138437
KP1_1209_S 138623139168
KP1_1211_S 141121141987
KP1_1227_S 152751153116
KP1_1228_S 153141153836
tsx_S 153879154763
yajI_S 155064155603
nrdR_S 155751156200
thiJ_S 166177166776
apbA_S 166733167644
KP1_1246_S 167769168353
yajR_S 168396169760
KP1_1248_S 169920171098
KP1_1251_S 172803173621
tig_S 188072189370
clpP_S 189680190303
clpX_S 190554191828
lon_S 191904194366
hupB_S 194576194848
ppiD_S 195063196937
KP1_1275_S 197086197454
ptsG_S 225954226268
lacI_S 227947229017
rpmE2_S 229134229397
rpmJ (50S ribosomal protein L36) 229397229537
adk_S 250679251323
hemH_S 251452252414
gsk_S 252478253782
ybaL_S 253818255494
fsr_S 255720256940
1080588Illuminacontig_0004378788ydhO_S 184924185796 EMBL GBK
KP1_3065_S 186137186484
gloA_S 187317187724
nemA_S 187803188900
ydhM_S 188954189553
anmK_S 197625198722
KP1_3049_S 198815199138
pdxH_S 199196199852
tyrS_S 199977201251
pdxY_S 201312202172
gst_S 202215202820
1080614Illuminacontig_0001371514yieP_S 4091110 EMBL GBK
rbsK_S 35134442
rbsB_S 45465436
rbsC_S 54646429
gidB_S 1811918742
atpI_S 1928719739
atpB_S 1974720562
atpE_S 2061120850
atpF_S 2090721371
rpmH (50S ribosomal protein L34) 4962249762
yicE_S 136909138309
gltS_S 138957139787
glpK_S 139902141413
glpF_S 141435142286
KP1_5367_S 142729142974
sbp_S 143126144115
rpmB (50S ribosomal protein L28) 171923172159
rpmG (50S ribosomal protein L33) 172180172347
KP1_5309_S 191016191972
KP1_5307_S 191976193247
yibO_S 193257194882
yibN_S 195047195478
grxC_S 195583195834
secB_S 195895196362
KP1_5262_S 247089247799
tkrA_S 247908248879
KP1_5260_S 248904250184
KP1_5259_S 250289251224
KP1_5258_S 251228251977
KP1_5213_S 308598309629
KP1_5210_S 311538312107
prlC_S 319905321947
yhiP_S 322853324325
uspA_S 324582325019
yhiO_S 325402325737
pitA_S 325797327293
1080592Illuminacontig_0006346706KP1_2703_S 153240153995 EMBL GBK
KP1_2702_S 154173154484
KP1_2700_S 155053156081
KP1_2697_S 157684158355
yneH_S 171362172288
yneI_S 172370173263
yneJ_S 173862174740
KP1_2673_S 174694175176
KP1_2672_S 175322176266
blaLEN (LEN beta-lactamase) 208072208929
glnH_S 311828312574
dps_S 313005313508
ybiF_S 313746314633
ompX_S 314985315500
ybiP_S 315591317180
KP1_1803_S 317440317565
mntR_S 317751318224
ybiR_S 318221319333
1080600Illuminacontig_0008293730potH_S 2223723190 EMBL GBK
potI_S 2314524032
KP1_1853_S 2409024578
KP1_1855_S 2582626542
hcr_S 4161742585
hcp_S 4259644248
ybjE_S 4439245291
rpsA (30S ribosomal protein S1) 8586687539
ihfB_S 8769187978
msbA_S 9048592233
KP1_1916_S 9326594494
ssuC_S 117855118646
ssuD_S 118657119802
ssuA_S 119799120761
ssuE_S 120754121329
pyrD_S 121551122588
KP1_2044_S 221382222119
ycdY_S 222142222696
ycdZ_S 222800223282
KP1_2047_S 223417223962
KP1_2048_S 224029224622
mdoC_S 224657225817
yceF_S 251213251797
KP1_2077_S 251939252460
rpmF (50S ribosomal protein L32) 252477252650
plsX_S 252854253951
fabH_S 254006254959
fabD_S 254975255904
fabG_S 255917256651
fabF_S 257188258429
pabC_S 258555259364
yceG_S 259366260388
tmk_S 260378261019
holB_S 261016262020
ycfH_S 262031262825
ptsG2_S 263122264555
KP1_2092_S 264817265173
ycfQ_S 273405274040
ycfS_S 274676275635
mfd_S 275799279245
ycfU_S 279541280749
ycfV_S 280742281443
ycfW_S 281443282687
1080632Illuminacontig_0009264157spy_S 2275823240 EMBL GBK
nadE_S 2429125118
osmE_S 2540125739
celA_S 2601826338
celC_S 2789828245
1080634Illuminacontig_0012242739aroC_S 3349934587 EMBL GBK
mepA_S 3459035414
yfcA_S 3541436223
yfcM_S 3622336771
KP1_3965_S 3680337084
flk_S 4669947679
KP1_3960_S 4767847806
pdxB_S 4779048926
KP1_3958_S 4899050003
truA_S 5000350815
dedA_S 5084251501
accD_S 5162552608
folX_S 6362563987
yfcG_S 6405364682
nuoA_S 7872279168
nuoB_S 7918479858
nuoC_S 7994681754
nuoE_S 8175782257
nuoF_S 8225483591
yejM_S 150585152345
KP1_3855_S 152364152591
yejK_S 152778153785
KP1_3853_S 153805154566
KP1_3852_S 154609155244
rsuA_S 159926160645
bcr_S 160642161838
KP1_3844_S 162169162513
yejE_S 164108165133
folE_S 193778194446
galS_S 195775196797
mglB_S 197094198092
mglA_S 198211199731
1080601Illuminacontig_0013220291yabF_S 1850119034 EMBL GBK
kefC_S 1902720892
folA_S 2106721546
apaH_S 2183922687
apaG_S 2269223069
ksgA_S 2307223893
pdxA_S 2389024879
araD_S 4071241407
araA_S 4154543047
araB_S 4305844767
araC_S 4510445949
yabI_S 4607846845
tbpA_S 4910350047
yabN_S 5037652031
KP1_0882_S 5211352271
setA_S 5254353727
gudP_S 5377255082
ilvI_S 6840470128
ilvH_S 7010170622
fruR_S 7080371807
KP1_0903_S 7241272906
mraW_S 7290973850
ftsL_S 7384774212
ftsI_S 7422875994
mutT_S 9396694358
yacG_S 9441194605
KP1_0925_S 9461595358
coaE_S 9535895978
KP1_0927_S 9613496265
guaC_S 9632297365
ppdD_S 99993100424
nadC_S 100606101499
ampD_S 101633102196
ampE_S 102193103047
KP1_0935_S 103167104117
KP1_0936_S 104117105523
lpdA_S 113414114841
KP1_0945_S 115006115290
KP1_0946_S 115335116150
hpt_S 130699131247
yadG_S 132152133078
yadH_S 133075133845
yadI_S 133968134408
KP1_0965_S 134473135720
folK_S 138007138486
yadB_S 139940140821
dksA_S 140881141354
sfsA_S 141499142215
map_S 185500186294
rpsB (30S ribosomal protein S2) 186618187343
tsf_S 187463188314
pyrH_S 188462189187
frr_S 189338189895
ispC_S 190123191325
1080597Illuminacontig_0016179483KP1_4022_S 1946020359 EMBL GBK
KP1_4023_S 2045421029
KP1_4024_S 2109121540
ypeA_S 2152721967
KP1_4027_S 2197422114
amiA_S 2216423036
hemF_S 2303623935
hscB_S 128766129281
iscA_S 129356129679
KP1_4113_S 129697130083
iscS_S 130110131324
iscR_S 131504131995
yfhQ_S 132248132982
suhB_S 133103133906
glyA_S 139811141064
hmpA_S 141390142580
KP1_4132_S 142655142993
yfhA_S 143059144396
yfhG_S 144383145090
yfhK_S 145099146538
nadB_S 165173166792
yfiC_S 166777167535
srmB_S 167645168976
yfiD_S 169022169405
ung_S 169718170407
1080594Illuminacontig_0019170687KP1_3440_S 7523975685 EMBL GBK
ycgM_S 7578076439
KP1_3442_S 7645676776
minC_S 7686477565
minD_S 7758978401
minE_S 7840578674
fadD_S 7994781632
yeaY_S 8183882419
yeaZ_S 8245883153
KP1_3451_S 8534185685
KP1_3486_S 119143119526
holE_S 119631119861
exoX_S 119940120599
ptrB_S 120603122663
KP1_3490_S 122784123446
yebG_S 123588123935
purT_S 124071125249
msbB_S 137612138583
KP1_3501_S 138701140020
znuC_S 141058141810
znuB_S 141810142595
ruvB_S 142659143669
ruvA_S 143678144289
1080619Illuminacontig_0020167901mrkA 4409044698 EMBL GBK
mrkB 4479445495
mrkD 4798448979
mrkF 4899349628
mrkJ 4966450380
mrkI 5052451108
mrkH 5111451818
KP1_4524_S 7734378743
KP1_4523_S 7875180178
KP1_4521_S 8024681019
KP1_4520_S 8101681495
galR_S 8145682472
ygdP_S 9030190831
ptsP_S 9084493090
lgt_S 9333694211
thyA_S 9421895012
ppdA_S 9528595752
argA_S 109400110731
amiC_S 110923112212
cobD_S 112230113306
pduX_S 113310114212
pduW_S 114268115482
KP1_4457_S 140160140885
KP1_4456_S 140882141667
KP1_4455_S 141678142472
KP1_4453_S 143179143916
KP1_4452_S 143918144199
cbiQ_S 144186144863
1080591 Illumina contig_0010 166470
1080605Illuminacontig_0021161936yjjA_S 8048980983 EMBL GBK
dnaC_S 8104981786
dnaT_S 8178982328
yjjB_S 8243182919
yjjP_S 8289583671
KP1_0775_S 8395385137
KP1_0776_S 8515486035
fhuF_S 8984690634
ycdT_S 9074691792
mtr_S 9194392296
holD_S 9370794120
rimI_S 9408994535
yjjG_S 9455095227
prfC_S 9531896907
deoA_S 101356102678
deoB_S 102731103954
KP1_0801_S 104057104776
lplA_S 104857105873
smp_S 105873106520
serB_S 106604107596
sms_S 107606108988
nadR_S 109010110242
yjjK_S 110418112085
creB_S 117494118183
creC_S 118183119607
arcA_S 121089121805
lasT_S 122438123124
thrA_S 123444125948
thrB_S 125950126879
rpsT (30S ribosomal protein S20) 142311142574
1080583Illuminacontig_0024138502KP1_4812_S 1875219252 EMBL GBK
ygjR_S 1932620315
ygjT_S 2058721558
ygjU_S 2179023037
KP1_4816_S 2305323607
KP1_4822_S 3035030733
KP1_4823_S 3088331251
KP1_4824_S 3129731602
KP1_4825_S 3160532003
KP1_4826_S 3200032296
KP1_4861_S 6074561131
yraO_S 6112161747
yraP_S 6175762332
KP1_4865_S 6245463494
yhbO_S 6421764882
KP1_4868_S 6484465287
KP1_4870_S 6561466117
KP1_4871_S 6611166635
yhbU_S 6685767852
yhbV_S 6784368736
yhbW_S 6888069887
rpsO (30S ribosomal protein S15) 7680077069
infB 7971080027
rpmA (50S ribosomal protein L27) 9818898445
rplU (50S ribosomal protein L21) 9846698777
yrbI_S 107542108108
KP1_4921_S 108105108680
yhbN_S 108649109194
yhbG_S 109201109926
rpoN_S 109974111407
yhbH_S 111430111717
ptsN_S 111788112276
KP1_4927_S 112322113176
ptsO_S 113173113445
rpsI (30S ribosomal protein S9) 131217131609
rplM (50S ribosomal protein L13) 131625132053
1080612Illuminacontig_0025136904yedI_S 116021116932 EMBL GBK
KP1_3554_S 119027119251
KP1_3553_S 119382119573
rcsA_S 119606120229
KP1_3551_S 120604121035
dapA4_S 132896133777
KP1_3538_S 133862134530
tyrP_S 134558135769
KP1_3536_S 135960136199
ftnA_S 136236136733
1080584Illuminacontig_0017133267yjgB_S 24543473 EMBL GBK
KP1_0569_S 36044488
KP1_0568_S 44785365
KP1_0567_S 53766200
KP1_0517_S 5103451774
KP1_0516_S 5175952862
KP1_0515_S 5177152889
KP1_0514_S 5287354006
KP1_0513_S 5412054764
rplI (50S ribosomal protein L9) 101758102207
rpsR (30S ribosomal protein S18) 102249102476
priB_S 102481102648
rpsF (30S ribosomal protein S6) 102801103196
KP1_0467_S 103538103813
KP1_0446_S 120589120786
KP1_0445_S 120959121300
hflC_S 121383122387
hflK_S 122390123652
hflX_S 123718124998
hfq_S 125074125382
1080586Illuminacontig_0014132696betA_S 934111050 EMBL GBK
betB_S 1101912491
betT_S 1322115254
ykfE_S 1530115828
KP1_1607_S 9572196518
dcuC_S 9661197984
cspE_S 9895299245
KP1_1612_S 9931299695
ybeM_S 99785100573
tatE_S 100818101024
lipA_S 101234102199
ybeF_S 102380103384
KP1_1623_S 110143110610
KP1_1624_S 110614110931
nadD_S 111856112509
holA_S 112499113521
rlpB_S 113530114120
1080623Illuminacontig_0026128231KP1_2532_S 105285105620 EMBL GBK
ydgB_S 105617106339
ydgI_S 106376107758
KP1_2535_S 107936108886
KP1_2536_S 108883109065
1080630Illuminacontig_0029110947prfA_S 2179122873 EMBL GBK
hemK_S 2287323721
ychQ_S 2372124113
kdsA_S 2496925823
chaA_S 2591127011
chaB_S 2727527505
chaC_S 2764228322
tonB 8028080693
KP1_3291_S 8189382177
pfkB_S 8227083202
KP1_3289_S 8355784315
rpmI (50S ribosomal protein L35) 8782388020
rplT (50S ribosomal protein L20) 8807188427
1080595Illuminacontig_0002106407asd_S 2136722521 EMBL GBK
glgB_S 2276024946
glgX_S 2503926919
glgC_S 2700028295
glgA_S 2829529728
aroK_S 7088771408
aroB_S 7146472558
dam_S 7401174838
rpe_S 7485675533
gph_S 7552676287
trpS_S 7628077284
cysG_S 7735978732
nirD_S 7888579211
yhfC_S 8330984496
ppiA_S 8477485343
KP1_5076_S 8545085617
KP1_5075_S 8560786209
pabA_S 8624286805
crp_S 9023690868
KP1_5070_S 9117591579
prkB_S 9163592504
KP1_5068_S 9254192759
yheT_S 9275693778
yheS_S 9398095884
rpsL (30S ribosomal protein S12) 102683103057
rpsG (30S ribosomal protein S7) 103154103624
1080602Illuminacontig_0030105956yeaE_S 9527396157 EMBL GBK
KP1_2220_S 9621397097
gapA 9747597924
yeaA_S 9850598918
KP1_2224_S 9896299240
KP1_2225_S 9933799681
1080621Illuminacontig_0023100143ssb_S 4262543152 EMBL GBK
uvrA_S 4340446229
KP1_0300_S 4623046586
KP1_0299_S 4659047006
pgi 7293273363
iclR_S 9220393129
aceK_S 9318094964
aceA_S 9506796386
metA_S 9831399242
1080629Illuminacontig_003195799KP1_0122_S 3251176 EMBL GBK
btuB_S 11212959
KP1_0120_S 30023124
trmA_S 33264426
KP1_0118_S 44814840
yijC_S 48565488
rpmE (50S ribosomal protein L31) 2631626528
cpxP_S 3702737530
cpxR_S 3768038378
cpxA_S 3837539748
KP1_0077_S 3981240486
sodA_S 4055941185
rhaT_S 4146942503
rhaR_S 4253643381
rhaS_S 4345544291
rhaB_S 4460246068
rhaA_S 4605947324
rhaD_S 4750148331
bipA_S 7802979852
glnA_S 8023181640
glnL_S 8182982878
glnG_S 8288784296
hemN_S 8455785930
KP1_0026_S 8611986625
engB_S 8721087842
polA_S 8819090982
1080608Illuminacontig_002894008KP1_4731_S 3747738148 EMBL GBK
ygiC_S 3815439314
ygiD_S 3935540146
ygiE_S 4033341103
ribB_S 4116541818
uppP_S 5071851539
folB_S 5173752123
KP1_4750_S 5222852845
ureD_S 5324354067
ureA_S 5407754379
ureB_S 5438954709
rpsU (30S ribosomal protein S21) 6124961464
1080611Illuminacontig_001190320KP1_4281_S 48216497 EMBL GBK
emrA_S 81889360
emrR_S 94869986
ygaH_S 1010710442
smpB_S 6361364095
KP1_4197_S 6420664682
KP1_4196_S 6467264962
smpA_S 6503265373
ppnK_S 6726968147
grpE_S 6827268862
rpsP (30S ribosomal protein S16) 7291573163
rplS (50S ribosomal protein L19) 7456974916
1080606Illuminacontig_003286443fadA_S 64887651 EMBL GBK
fre_S 77588459
rfaH_S 1016310651
tatD_S 1064811439
tatC_S 1148412263
tatB_S 1226612802
ubiB_S 1318714827
KP1_0193_S 1482415429
ubiE_S 1544316198
yigN_S 1626917717
udp_S 1785318614
metR_S 2227123224
yigM_S 2311224011
KP1_0183_S 2410024900
pldB_S 2494525937
rhtB_S 2604726667
yigB_S 3635437070
xerC_S 3707037972
KP1_0169_S 3796938676
dapF_S 3867339500
KP1_0167_S 3953339736
cyaY_S 3987540195
ilvY_S 7545076424
ilvA_S 7642177908
ilvD_S 7796879818
ilvE_S 7987980808
ilvM_S 8082881085
1080631 Illumina contig_0033 64211
1080628Illuminacontig_001561901nagD_S 21842936 EMBL GBK
nagC_S 30654285
nagA_S 42945442
nagB_S 55566356
nagE_S 66728627
glnS_S 880610473
KP1_1656_S 1181412314
KP1_1657_S 1236212694
fur_S 1777718229
fldA_S 1852119120
KP1_1661_S 1920319565
ybfF_S 1963020403
cydA_S 5228853859
cydB_S 5387555014
KP1_1697_S 5570856112
tolQ_S 5610956801
tolR_S 5680557233
1080615Illuminacontig_003460099ybhA_S 1582316641 EMBL GBK
ybhE_S 1687017865
KP1_1726_S 1797418240
KP1_1727_S 1829218597
KP1_1728_S 1872318968
KP1_1729_S 1929820509
KP1_1730_S 2066421398
KP1_1731_S 2143621990
KP1_1732_S 2207322441
KP1_1734_S 2354624469
1080622Illuminacontig_003555296wzi (Wzi outer membrane protein of cps cluster) 4938249828 EMBL GBK
1080596Illuminacontig_003643842epd_S 4621490 EMBL GBK
pgk_S 15302693
fbaA_S 27913870
yggA_S 50715706
yggE_S 57966563
KP1_4633_S 1084411173
KP1_4632_S 1133411918
pepP_S 1194213258
KP1_4629_S 1444415646
KP1_4618_S 2689427622
KP1_4617_S 2767327984
yqfA_S 2814828807
KP1_4613_S 3045230718
KP1_4612_S 3069931109
fldB_S 3111631637
xerD_S 3173832634
dsbC_S 3265733370
1080587Illuminacontig_001841788frdD_S 1313513524 EMBL GBK
blc_S 1363814171
sugE_S 1416814485
ecnB_S 1462914775
ecnA_S 1493415065
efp_S 1513915705
1080585Illuminacontig_002241174hmsS_S 79898438 EMBL GBK
KP1_0379_S 84859318
KP1_0378_S 948010178
cbpA_S 1032411241
KP1_0375_S 1122611546
1080582Illuminacontig_003740034mdh 49275403 EMBL GBK
KP1_4977_S 2460624797
KP1_4978_S 2501126027
KP1_4980_S 2685927311
accB_S 2733427801
accC_S 2781229161
KP1_4984_S 2927229514
prmA_S 3096731848
KP1_4987_S 3181832048
1080635Illuminacontig_003835015zraP_S 63236760 EMBL GBK
KP1_0242_S 67647465
KP1_0241_S 74727744
KP1_0239_S 79318521
nfi_S 85649235
hemE_S 924810312
nudC_S 1035311126
rsd_S 1122011717
rpoB 2794928449
rplL (50S ribosomal protein L7/L12) 3043030795
rplJ (50S ribosomal protein L10) 3086231359
rplA (50S ribosomal protein L1) 3177332477
rplK (50S ribosomal protein L11) 3248132909
1080607Illuminacontig_002729072KP1_4652_S 991110411 EMBL GBK
endA_S 1044911213
KP1_4654_S 1123012036
gshB_S 1205713007
KP1_4657_S 1318213745
yqgF_S 1374514161
1080618 Illumina contig_0005 28910
1080604Illuminacontig_003927716silR 30093689 EMBL GBK
silA 692810074
1080609Illuminacontig_004026306yrdA_S 335889 EMBL GBK
KP1_4999_S 8651122
aroE_S 11191937
yrdC_S 19412558
yrdD_S 25183060
KP1_5003_S 30873560
smf_S 35324656
def_S 47855294
KP1_5012_S 1024810616
rplQ (50S ribosomal protein L17) 1072511111
KP1_5015_S 1115212141
rpsD (30S ribosomal protein S4) 1216712787
rpsK (30S ribosomal protein S11) 1282113210
rpsM (30S ribosomal protein S13) 1322713583
rpmJ (50S ribosomal protein L36) 1373013846
secY_S 1388015211
rplO (50S ribosomal protein L15) 1521915653
rpmD (50S ribosomal protein L30) 1565715836
rpsE (30S ribosomal protein S5) 1584016343
rplR (50S ribosomal protein L18) 1635816711
rplF (50S ribosomal protein L6) 1672117254
rpsH (30S ribosomal protein S8) 1726717659
rpsN (30S ribosomal protein S14) 1769317998
rplE (50S ribosomal protein L5) 1801318552
rplX (50S ribosomal protein L24) 1856718881
rplN (50S ribosomal protein L14) 1889219263
rpsQ (30S ribosomal protein S17) 1942919683
rpmC (50S ribosomal protein L29) 1968319874
rplP (50S ribosomal protein L16) 1987420284
rpsC (30S ribosomal protein S3) 2029720995
rplV (50S ribosomal protein L22) 2101321345
rpsS (30S ribosomal protein S19) 2136021638
rplB (50S ribosomal protein L2) 2165522476
rplW (50S ribosomal protein L23) 2249422796
rplD (50S ribosomal protein L4) 2279323398
rplC (50S ribosomal protein L3) 2340924038
rpsJ (30S ribosomal protein S10) 2407124382
1080626 Illumina contig_0041 11876
1080593 Illumina contig_0044 4295
1080613 Illumina contig_0045 3248
1080603 Illumina contig_0043 2856
1080627 Illumina contig_0042 1711
1080590 Illumina contig_0046 1490
1080617 Illumina contig_0047 1362
1080624 Illumina contig_0048 1074
1080598 Illumina contig_0049 749
1080616 Illumina contig_0050 701
1080620 Illumina contig_0051 678
1080599 Illumina contig_0052 557
1080589 Illumina contig_0053 556
1080633 Illumina contig_0054 447
1080581 Illumina contig_0055 308
1080610 Illumina contig_0007 296