Sequence bin for SB6442

Contig summary statistics

Contigs
72
Total length
5,427,219
Minimum length
334
Maximum length
779,673
Mean length
75,379
N50
183,706
L50
9
N90
61,566
L90
27
N95
33,715
L95
33

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1080487Illuminacontig_0001779673yedI_S 9239893309 EMBL GBK
KP1_3554_S 9540495628
KP1_3553_S 9575995950
rcsA_S 9598396606
KP1_3551_S 9698197412
dapA4_S 109273110154
KP1_3538_S 110245110913
tyrP_S 110939112150
KP1_3536_S 112341112580
ftnA_S 112617113114
ruvA_S 139700140311
ruvB_S 140320141330
znuB_S 141393142178
znuC_S 142178142930
KP1_3501_S 143968145287
msbB_S 145405146376
purT_S 158740159918
yebG_S 160054160401
KP1_3490_S 160543161205
ptrB_S 161326163386
exoX_S 163390164049
holE_S 164128164358
KP1_3486_S 164463164846
KP1_3451_S 198303198647
yeaZ_S 200835201530
yeaY_S 201569202150
fadD_S 202356204041
minE_S 205316205585
minD_S 205589206401
minC_S 206425207126
KP1_3442_S 207214207534
ycgM_S 207551208210
KP1_3440_S 208305208751
prfA_S 288526289608
hemK_S 289608290456
ychQ_S 290456290848
kdsA_S 291704292558
chaA_S 292646293746
chaB_S 294010294240
chaC_S 294377295057
tonB 346990347403
KP1_3291_S 348604348888
pfkB_S 348981349913
KP1_3289_S 350268351026
rpmI (50S ribosomal protein L35) 354534354731
rplT (50S ribosomal protein L20) 354782355138
ydhO_S 563731564603
KP1_3065_S 564944565291
gloA_S 566124566531
nemA_S 566610567707
ydhM_S 567761568360
anmK_S 576433577530
KP1_3049_S 577623577946
pdxH_S 578004578660
tyrS_S 578785580059
pdxY_S 580120580980
gst_S 581023581628
1080431Illuminacontig_0004336420kfuC 5438655414 EMBL GBK
kfuB 5541656990
kfuA 5701258028
pyrD_S 9151692553
ssuE_S 9277593350
ssuA_S 9334394305
ssuD_S 9430295447
ssuC_S 9545896249
KP1_1916_S 119610120839
msbA_S 121871123619
ihfB_S 126126126413
rpsA (30S ribosomal protein S1) 126565128238
ybjE_S 168781169680
hcp_S 169824171476
hcr_S 171487172455
KP1_1855_S 187530188246
KP1_1853_S 189494189982
potI_S 190040190927
potH_S 190882191835
ybiR_S 241375242487
mntR_S 242484242957
KP1_1803_S 243143243268
ybiP_S 243528245117
ompX_S 245208245723
ybiF_S 246075246962
dps_S 247200247703
glnH_S 248134248880
KP1_1734_S 311684312607
KP1_1732_S 313712314080
KP1_1731_S 314163314717
KP1_1730_S 314755315489
KP1_1729_S 315644316855
KP1_1728_S 317186317431
KP1_1727_S 317557317862
KP1_1726_S 317914318180
ybhE_S 318289319284
ybhA_S 319513320331
1080473Illuminacontig_0010295519spy_S 2275123233 EMBL GBK
nadE_S 2428425111
osmE_S 2539425732
celA_S 2601126331
celC_S 2789128238
KP1_2532_S 272564272899
ydgB_S 272896273618
ydgI_S 273655275037
KP1_2535_S 275215276165
KP1_2536_S 276162276344
1080477Illuminacontig_0002267235yicE_S 5648457884 EMBL GBK
gltS_S 5853259362
glpK_S 5947760988
glpF_S 6101061861
KP1_5367_S 6230462549
sbp_S 6270163690
rpmB (50S ribosomal protein L28) 9466594901
rpmG (50S ribosomal protein L33) 9492295089
KP1_5309_S 118997119953
KP1_5307_S 119957121228
yibO_S 121238122863
yibN_S 123028123459
grxC_S 123564123815
secB_S 123876124343
KP1_5262_S 166675167385
tkrA_S 167494168465
KP1_5260_S 168490169770
KP1_5259_S 169875170810
KP1_5258_S 170814171563
KP1_5213_S 226109227140
KP1_5210_S 229049229618
prlC_S 237416239458
KP1_5202_S 239409240218
yhiP_S 240364241836
uspA_S 242093242530
yhiO_S 242913243248
pitA_S 243308244804
1080445Illuminacontig_0011262906fsr_S 6975170971 EMBL GBK
ybaL_S 7119772873
gsk_S 7290974213
hemH_S 7427775239
adk_S 7536876012
rpmJ (50S ribosomal protein L36) 9737097510
rpmE2_S 9751097773
rpmE (50S ribosomal protein L31) 9751097773
lacI_S 9789098960
ptsG_S 100639100953
KP1_1275_S 129490129858
ppiD_S 130007131881
hupB_S 132096132368
lon_S 132578135040
clpX_S 135116136390
clpP_S 136641137264
tig_S 137575138873
KP1_1251_S 153321154139
KP1_1248_S 155844157022
yajR_S 157182158546
KP1_1246_S 158589159173
apbA_S 159298160209
thiJ_S 160166160765
nrdR_S 170743171192
yajI_S 171340171879
tsx_S 172180173064
KP1_1228_S 173107173802
KP1_1227_S 173827174192
KP1_1211_S 184956185822
KP1_1209_S 187774188319
KP1_1207_S 188505189146
KP1_1206_S 189414190316
phoE 256592257011
1080430Illuminacontig_0014219833yqgF_S 2100621422 EMBL GBK
KP1_4657_S 2142221985
gshB_S 2216023110
KP1_4654_S 2313123937
endA_S 2395424718
KP1_4652_S 2475625256
epd_S 3742738455
pgk_S 3849539658
fbaA_S 3975640835
yggB_S 4102741884
yggA_S 4203642671
yggE_S 4276143537
KP1_4633_S 4781848147
KP1_4632_S 4830848892
pepP_S 4891650232
KP1_4629_S 5141852620
KP1_4618_S 6386964597
KP1_4617_S 6464864959
yqfA_S 6512365782
KP1_4613_S 6737567641
KP1_4612_S 6762268032
fldB_S 6803968560
xerD_S 6866169557
dsbC_S 6958070293
mrkA 115335115943
mrkB 116039116740
mrkC 116752119238
mrkD 119229120224
mrkF 120238120873
mrkJ 120909121625
mrkI 121769122353
KP1_4524_S 148588149988
KP1_4523_S 149996151423
KP1_4521_S 151491152264
KP1_4520_S 152261152740
galR_S 152701153717
ygdP_S 161546162076
ptsP_S 162089164335
lgt_S 164581165456
thyA_S 165463166257
ppdA_S 166530166997
argA_S 180644181975
amiC_S 182167183456
cobD_S 183474184550
pduX_S 184554185456
pduW_S 185512186726
KP1_4457_S 211404212129
KP1_4456_S 212126212911
KP1_4455_S 212922213716
KP1_4453_S 214423215160
KP1_4452_S 215162215443
cbiQ_S 215430216107
1080455Illuminacontig_0015217846ispC_S 2894630148 EMBL GBK
frr_S 3037630933
pyrH_S 3108431809
tsf_S 3195732808
rpsB (30S ribosomal protein S2) 3292833653
map_S 3397734771
sfsA_S 7806878784
dksA_S 7892979402
yadB_S 7946280343
folK_S 8179782276
KP1_0965_S 8456485811
yadI_S 8587686316
yadH_S 8643987209
yadG_S 8720688132
hpt_S 8903789585
KP1_0946_S 104122104937
KP1_0945_S 104982105266
lpdA_S 105431106858
KP1_0936_S 114749116155
KP1_0935_S 116155117105
ampE_S 117225118079
ampD_S 118076118639
nadC_S 118773119666
ppdD_S 119848120279
guaC_S 122907123950
KP1_0927_S 124007124138
coaE_S 124294124914
KP1_0925_S 124914125657
yacG_S 125667125861
mutT_S 125914126306
ftsI_S 144278146044
ftsL_S 146060146425
mraW_S 146422147363
KP1_0903_S 147366147860
fruR_S 148465149469
ilvH_S 149650150171
ilvI_S 150144151868
gudP_S 165190166500
setA_S 166545167729
KP1_0882_S 168001168159
yabN_S 168241169896
tbpA_S 170225171169
yabI_S 173427174194
araC_S 174323175168
araB_S 175505177214
araA_S 177225178727
araD_S 178865179560
pdxA_S 195393196382
ksgA_S 196379197200
apaG_S 197203197580
apaH_S 197585198433
folA_S 198726199205
kefC_S 199380201245
yabF_S 201238201771
1080434Illuminacontig_0016213450blaLEN (LEN beta-lactamase) 2333524192 EMBL GBK
KP1_2672_S 5600456948
KP1_2673_S 5709457576
yneJ_S 5753058408
yneI_S 5900759900
yneH_S 5998260908
KP1_2697_S 7391374584
KP1_2700_S 7618777215
KP1_2702_S 7778478095
KP1_2703_S 7827379028
1080448Illuminacontig_0005183706metA_S 12162145 EMBL GBK
aceA_S 40725391
aceK_S 54947278
iclR_S 73298255
pgi 2709527526
KP1_0299_S 5331153727
KP1_0300_S 5373154087
uvrA_S 5408856913
ssb_S 5716557692
KP1_0375_S 130249130569
cbpA_S 130554131471
KP1_0378_S 131617132315
KP1_0379_S 132477133310
hmsS_S 133357133806
efp_S 167783168349
ecnA_S 168423168554
ecnB_S 168713168859
sugE_S 169003169320
blc_S 169317169850
frdD_S 169964170353
1080427Illuminacontig_0017181517rpsT (30S ribosomal protein S20) 1960419867 EMBL GBK
thrB_S 3507236001
thrA_S 3600338507
lasT_S 3882739513
arcA_S 4014640862
creC_S 4234443768
creB_S 4376844457
yjjK_S 4986651533
nadR_S 5170952941
sms_S 5296354345
serB_S 5435555347
smp_S 5543156078
lplA_S 5607857094
KP1_0801_S 5717557894
deoB_S 5799759220
deoA_S 5927360595
prfC_S 6504566634
yjjG_S 6672567402
rimI_S 6741767863
holD_S 6783268245
mtr_S 6965670009
ycdT_S 7015971205
fhuF_S 7131772105
KP1_0776_S 7591776798
KP1_0775_S 7681577999
yjjP_S 7828179057
yjjB_S 7903379521
dnaT_S 7962480163
dnaC_S 8016680903
yjjA_S 8096981463
1080468Illuminacontig_0018170680KP1_4022_S 1933220231 EMBL GBK
KP1_4023_S 2032620901
KP1_4024_S 2096321412
ypeA_S 2139921839
KP1_4027_S 2184621986
amiA_S 2203622908
hemF_S 2290823807
hscB_S 120335120850
iscA_S 120925121248
KP1_4113_S 121266121652
iscS_S 121679122893
iscR_S 123073123564
yfhQ_S 123817124551
suhB_S 124672125475
glyA_S 131381132634
hmpA_S 132960134150
KP1_4132_S 134225134563
yfhA_S 134629135966
yfhG_S 135953136660
yfhK_S 136669138108
nadB_S 156743158362
yfiC_S 158347159105
srmB_S 159215160546
yfiD_S 160592160975
ung_S 161287161976
1080475Illuminacontig_0019165478KP1_4812_S 3679537295 EMBL GBK
ygjR_S 3736938358
ygjT_S 3863039601
ygjU_S 3983341080
KP1_4816_S 4109641650
KP1_4822_S 4839348776
KP1_4823_S 4892649294
KP1_4824_S 4934049645
KP1_4825_S 4964850046
KP1_4826_S 5004350339
KP1_4861_S 7744577831
yraO_S 7782178447
yraP_S 7845779032
KP1_4865_S 7915480194
yhbO_S 8091781582
KP1_4868_S 8154481987
KP1_4870_S 8231482817
KP1_4871_S 8281183335
yhbU_S 8355784552
yhbV_S 8454385436
yhbW_S 8558086587
rpsO (30S ribosomal protein S15) 104683104952
infB 107593107910
rpmA (50S ribosomal protein L27) 126071126328
rplU (50S ribosomal protein L21) 126349126660
yrbI_S 135424135990
KP1_4921_S 135987136562
yhbN_S 136531137076
yhbG_S 137083137808
rpoN_S 137856139289
yhbH_S 139312139599
ptsN_S 139670140158
KP1_4927_S 140204141058
ptsO_S 141055141327
rpsI (30S ribosomal protein S9) 159100159492
rplM (50S ribosomal protein L13) 159508159936
1080460Illuminacontig_0009163555ykfE_S 3361934146 EMBL GBK
betT_S 3419336226
betB_S 3695638428
betA_S 3839740106
1080453Illuminacontig_0003156210asd_S 3611237266 EMBL GBK
glgB_S 3750539691
glgX_S 3978441664
glgC_S 4174543040
glgA_S 4304044473
aroK_S 8563186152
aroB_S 8620887302
dam_S 8875589582
rpe_S 8960090277
gph_S 9027091031
trpS_S 9102492028
cysG_S 9210493477
nirD_S 9363093956
yhfC_S 9805499241
ppiA_S 99519100088
KP1_5076_S 100195100362
KP1_5075_S 100352100954
pabA_S 100987101550
crp_S 104981105613
KP1_5070_S 105920106324
prkB_S 106380107249
KP1_5068_S 107286107504
yheT_S 107501108523
yheS_S 108725110629
rpsL (30S ribosomal protein S12) 117440117814
rpsG (30S ribosomal protein S7) 117911118381
rplK (50S ribosomal protein L11) 123272123700
rplA (50S ribosomal protein L1) 123704124408
rplJ (50S ribosomal protein L10) 124822125319
rplL (50S ribosomal protein L7/L12) 125386125751
rpoB 127732128232
rsd_S 144464144961
nudC_S 145055145828
hemE_S 145869146933
nfi_S 146946147617
KP1_0239_S 147660148250
KP1_0241_S 148437148709
KP1_0242_S 148716149417
zraP_S 149421149858
1080481 Illumina contig_0013 153344
1080433Illuminacontig_0006136746hfq_S 76797987 EMBL GBK
hflX_S 80639343
hflK_S 940910671
hflC_S 1067411678
KP1_0445_S 1176112102
KP1_0446_S 1227512472
KP1_0467_S 2925929534
rpsF (30S ribosomal protein S6) 2987630271
priB_S 3042430591
rpsR (30S ribosomal protein S18) 3059630823
rplI (50S ribosomal protein L9) 3086531314
KP1_0513_S 7794878592
KP1_0514_S 7870679839
KP1_0515_S 7982380941
KP1_0516_S 7985080953
KP1_0517_S 8093881678
KP1_0567_S 126543127367
KP1_0568_S 127378128265
KP1_0569_S 128255129139
yjgB_S 129270130289
1080449Illuminacontig_0020121857wzi (Wzi outer membrane protein of cps cluster) 58876333 EMBL GBK
mglA_S 9837199891
mglB_S 100010101008
galS_S 101305102327
folE_S 103656104324
1080438Illuminacontig_0021108583nuoA_S 20422488 EMBL GBK
nuoB_S 25043178
nuoC_S 32665074
nuoE_S 50775577
nuoF_S 55746911
yejM_S 8324385003
KP1_3855_S 8502285249
yejK_S 8543686443
KP1_3853_S 8646387224
KP1_3852_S 8726787902
rsuA_S 9258493303
bcr_S 9330094496
KP1_3844_S 9482795171
yejE_S 9676697791
1080429Illuminacontig_002299920polA_S 48207612 EMBL GBK
engB_S 79608592
KP1_0026_S 91779683
hemN_S 987211245
glnG_S 1150612915
glnL_S 1292413973
glnA_S 1416215571
bipA_S 1595017773
rhaD_S 5161552445
rhaA_S 5259753862
rhaB_S 5385355319
rhaS_S 5563056466
rhaR_S 5654057385
rhaT_S 5741858452
sodA_S 5873659362
KP1_0077_S 5943660110
cpxA_S 6017461547
cpxR_S 6154462242
cpxP_S 6239262895
rpmE (50S ribosomal protein L31) 7339473606
yijC_S 9443395065
KP1_0118_S 9508195440
trmA_S 9549596595
KP1_0120_S 9679796919
btuB_S 9696298800
KP1_0122_S 9874599596
1080450Illuminacontig_002395973KP1_2044_S 64437180 EMBL GBK
ycdY_S 72037757
ycdZ_S 78618343
KP1_2047_S 84789023
KP1_2048_S 90909683
mdoC_S 971810878
yceF_S 3626536849
KP1_2077_S 3699137512
rpmF (50S ribosomal protein L32) 3752937702
plsX_S 3790639003
fabH_S 3905840011
fabD_S 4002740956
fabG_S 4096941703
fabF_S 4224043481
pabC_S 4360744416
yceG_S 4441845440
tmk_S 4543046071
holB_S 4606847072
ycfH_S 4708347877
ptsG2_S 4817449607
KP1_2092_S 4986950225
ycfQ_S 5845759092
ycfS_S 5972860687
mfd_S 6085164297
ycfU_S 6459365801
ycfV_S 6579466495
ycfW_S 6649567739
1080426Illuminacontig_002493167KP1_2225_S 1518515529 EMBL GBK
KP1_2224_S 1562615904
yeaA_S 1594816361
gapA 1694217391
KP1_2220_S 1776918653
yeaE_S 1870919593
1080462Illuminacontig_001289553rplS (50S ribosomal protein L19) 1592916276 EMBL GBK
rpsP (30S ribosomal protein S16) 1768217930
grpE_S 2191522505
ppnK_S 2263023508
smpA_S 2540425745
KP1_4196_S 2581526105
KP1_4197_S 2609526571
smpB_S 2668227164
ygaH_S 7911279447
emrR_S 7956880068
emrA_S 8019481366
KP1_4281_S 8305784733
1080486Illuminacontig_002589277rpmH (50S ribosomal protein L34) 3943839578 EMBL GBK
atpF_S 6783068294
atpE_S 6835168590
atpB_S 6863969454
atpI_S 6946369915
gidB_S 7046071083
rbsC_S 8277383738
rbsB_S 8376684656
rbsK_S 8476085689
yieP_S 8809288793
1080493Illuminacontig_002686436ilvM_S 53595616 EMBL GBK
ilvE_S 56366565
ilvD_S 66268476
ilvA_S 853610023
ilvY_S 1002010994
cyaY_S 4624646566
KP1_0167_S 4670546908
dapF_S 4694147768
KP1_0169_S 4776548472
xerC_S 4846949371
yigB_S 4937150087
rhtB_S 5977460394
pldB_S 6050461496
KP1_0183_S 6154162341
yigM_S 6243063329
metR_S 6321764170
udp_S 6782368584
yigN_S 6872070168
ubiE_S 7023970994
KP1_0193_S 7100871613
ubiB_S 7161073250
tatB_S 7363574171
tatC_S 7417474953
tatD_S 7499875789
rfaH_S 7578676274
fre_S 7797878679
fadA_S 7878679949
1080482Illuminacontig_000881163rlpB_S 1872919319 EMBL GBK
holA_S 1932820350
nadD_S 2034020993
KP1_1624_S 2191822235
KP1_1623_S 2223922706
ybeF_S 2946530469
lipA_S 3065031615
tatE_S 3181632022
ybeM_S 3226733055
KP1_1612_S 3314533528
cspE_S 3359533888
dcuC_S 3485636229
KP1_1607_S 3632237119
1080440Illuminacontig_002776565yfcG_S 1200312632 EMBL GBK
folX_S 1269813060
accD_S 2407425057
dedA_S 2518125840
truA_S 2586726679
KP1_3958_S 2667927692
pdxB_S 2775628892
KP1_3960_S 2887629004
flk_S 2900329983
KP1_3965_S 3959839879
yfcM_S 3991140459
yfcA_S 4045941268
mepA_S 4126842092
aroC_S 4209543183
1080444Illuminacontig_000761566tolR_S 44644892 EMBL GBK
tolQ_S 48965588
KP1_1697_S 55855989
cydB_S 66837822
cydA_S 78389409
KP1_1663_S 4044041132
ybfF_S 4117241945
KP1_1661_S 4201042372
fldA_S 4245543054
fur_S 4334643798
KP1_1657_S 4888249214
KP1_1656_S 4926249762
glnS_S 5110252769
nagE_S 5294854897
nagB_S 5521356013
nagA_S 5612757275
nagC_S 5728458504
nagD_S 5863359385
1080442Illuminacontig_002860303dkgB_S 3701173 EMBL GBK
yafC_S 12192124
KP1_1068_S 35124318
yafE_S 44065176
yafP_S 2711027562
pepD_S 2760529062
gpt_S 2932029778
frsA_S 2988431128
crl_S 3118631584
1080458 Illumina contig_0029 50493
1080483Illuminacontig_003043997mdh 49275403 EMBL GBK
KP1_4977_S 2460624797
KP1_4978_S 2501126027
KP1_4980_S 2685927311
accB_S 2733427801
accC_S 2781229161
KP1_4984_S 2927229514
prmA_S 3096731848
1080457 Illumina contig_0031 42398
1080439 Illumina contig_0032 37368
1080459Illuminacontig_003333715KP1_4731_S 47015372 EMBL GBK
ygiC_S 53786538
ygiD_S 65797370
ygiE_S 75578327
ribB_S 83899042
uppP_S 1794218763
folB_S 1896119347
KP1_4750_S 1945220069
ureD_S 2046721291
ureA_S 2130121603
ureB_S 2161321933
rpsU (30S ribosomal protein S21) 2847328688
1080488 Illumina contig_0034 33426
1080451Illuminacontig_003528791silR 30373717 EMBL GBK
silA 695610102
1080478 Illumina contig_0036 28548
1080465 Illumina contig_0037 21352
1080463 Illumina contig_0038 20660
1080484 Illumina contig_0039 18947
1080485 Illumina contig_0040 13932
1080454 Illumina contig_0041 13906
1080494 Illumina contig_0042 11153
1080436 Illumina contig_0043 7670
1080476 Illumina contig_0044 6027
1080446 Illumina contig_0045 5809
1080432 Illumina contig_0046 5792
1080447 Illumina contig_0047 4718
1080452 Illumina contig_0048 4448
1080435 Illumina contig_0049 4341
1080489 Illumina contig_0050 3411
1080480 Illumina contig_0052 1750
1080492 Illumina contig_0051 1468
1080470 Illumina contig_0053 1385
1080461 Illumina contig_0054 1343
1080425 Illumina contig_0055 1208
1080424 Illumina contig_0056 1065
1080437 Illumina contig_0057 1062
1080471 Illumina contig_0058 840
1080456 Illumina contig_0059 822
1080464 Illumina contig_0060 795
1080479 Illumina contig_0061 632
1080495 Illumina contig_0062 622
1080466 Illumina contig_0065 603
1080472 Illumina contig_0066 578
1080428 Illumina contig_0067 559
1080441 Illumina contig_0068 536
1080443 Illumina contig_0069 517
1080474 Illumina contig_0070 507
1080490 Illumina contig_0071 486
1080469 Illumina contig_0064 368
1080491 Illumina contig_0072 356
1080467 Illumina contig_0073 334