Sequence bin for SB6439

Contig summary statistics

Contigs
49
Total length
5,141,102
Minimum length
224
Maximum length
520,021
Mean length
104,921
N50
357,888
L50
7
N90
86,392
L90
18
N95
58,758
L95
22

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1080204Illuminacontig_0004520021KP1_1206_S 6296463866 EMBL GBK
KP1_1207_S 6413364774
KP1_1209_S 6496165506
KP1_1211_S 6745368319
KP1_1227_S 7908179446
KP1_1228_S 7947080165
tsx_S 8022081104
yajI_S 8140381942
nrdR_S 8209082539
thiJ_S 9251093109
apbA_S 9306693977
KP1_1246_S 9407694660
yajR_S 9470396067
KP1_1248_S 9622797405
KP1_1251_S 9911299930
tig_S 114385115683
clpP_S 115993116616
clpX_S 116867118141
lon_S 118217120679
hupB_S 120889121161
KP1_1275_S 123396123764
ptsG_S 152257152571
lacI_S 154250155320
rpmE (50S ribosomal protein L31) 155436155699
rpmE2_S 155436155699
rpmJ (50S ribosomal protein L36) 155699155839
adk_S 177191177835
hemH_S 177964178926
gsk_S 178990180294
ybaL_S 180330182006
fsr_S 182232183452
betA_S 398966400675
betB_S 400644402116
betT_S 402846404879
ykfE_S 404925405452
KP1_1607_S 482928483725
dcuC_S 483818485191
pagP_S 485530486048
cspE_S 486159486452
KP1_1612_S 486520486903
ybeM_S 486993487781
tatE_S 488024488230
lipA_S 488421489386
ybeF_S 489567490571
KP1_1623_S 497321497788
KP1_1624_S 497792498109
nadD_S 499034499687
holA_S 499677500699
rlpB_S 500708501298
1080207Illuminacontig_0006478216rpsG (30S ribosomal protein S7) 28623332 EMBL GBK
rpsL (30S ribosomal protein S12) 34293803
yheS_S 1061112515
yheT_S 1271913741
KP1_5068_S 1373813956
prkB_S 1399314862
KP1_5070_S 1491715321
crp_S 1562816260
pabA_S 1969120254
KP1_5075_S 2028720889
KP1_5076_S 2087921046
ppiA_S 2115321722
yhfC_S 2199923186
nirD_S 2728427610
cysG_S 2776429137
trpS_S 2921030214
gph_S 3020730968
rpe_S 3096131638
dam_S 3165632483
aroB_S 3393335027
aroK_S 3508335604
glgA_S 7671378146
glgC_S 7814679441
glgX_S 7952281402
glgB_S 8149583681
asd_S 8392085074
pitA_S 145656147152
yhiO_S 147208147543
uspA_S 147926148363
yhiP_S 148620150092
KP1_5202_S 150220151029
prlC_S 150980153022
KP1_5210_S 160812161381
KP1_5213_S 163300164331
KP1_5258_S 218589219338
KP1_5259_S 219342220277
KP1_5260_S 220382221662
tkrA_S 221687222658
KP1_5262_S 222766223476
secB_S 264332264799
grxC_S 264860265111
yibN_S 265216265647
yibO_S 265812267437
KP1_5307_S 267447268718
KP1_5309_S 268722269669
rpmG (50S ribosomal protein L33) 288386288553
rpmB (50S ribosomal protein L28) 288574288810
sbp_S 318380319369
KP1_5367_S 319521319766
glpF_S 320209321060
glpK_S 321082322593
gltS_S 322708323538
yicE_S 324186325586
rpmH (50S ribosomal protein L34) 428384428524
atpF_S 456846457310
atpE_S 457367457606
atpB_S 457656458471
atpI_S 458479458931
gidB_S 459476460099
rbsC_S 471789472754
rbsB_S 472782473672
rbsK_S 473776474705
yieP_S 477108477809
1080228Illuminacontig_0001441359blaSHV (SHV beta-lactamase) 6825769114 EMBL GBK
KP1_2672_S 100909101853
KP1_2673_S 101998102480
yneJ_S 102434103312
yneI_S 103909104802
yneH_S 104883105809
KP1_2697_S 118272118943
KP1_2700_S 120546121574
KP1_2702_S 122142122453
KP1_2703_S 122630123385
1080244Illuminacontig_0009367279glnH_S 5457655322 EMBL GBK
dps_S 5573156234
ybiF_S 5647257359
ompX_S 5771158223
ybiP_S 5831459903
KP1_1803_S 6016360288
mntR_S 6047460947
ybiR_S 6094462056
potH_S 111592112545
potI_S 112500113387
KP1_1853_S 113445113933
KP1_1855_S 115181115897
hcr_S 130963131931
hcp_S 131942133594
ybjE_S 133738134637
rpsA (30S ribosomal protein S1) 175178176851
ihfB_S 177003177290
msbA_S 179797181545
KP1_1916_S 182577183806
ssuC_S 213054213845
ssuD_S 213856215001
ssuA_S 214998215960
ssuE_S 215953216528
pyrD_S 216751217788
KP1_2044_S 295619296356
ycdY_S 296379296933
ycdZ_S 297037297519
KP1_2047_S 297651298196
KP1_2048_S 298263298856
mdoC_S 298891300051
yceF_S 325422326006
KP1_2077_S 326148326669
rpmF (50S ribosomal protein L32) 326686326859
plsX_S 327063328160
fabH_S 328214329167
fabD_S 329183330112
fabG_S 330125330859
fabF_S 331396332637
pabC_S 332763333572
yceG_S 333574334596
tmk_S 334586335227
holB_S 335224336228
ycfH_S 336239337033
ptsG2_S 337330338763
KP1_2092_S 339025339381
ycfQ_S 347617348252
ycfS_S 348888349847
mfd_S 350011353457
ycfU_S 353753354961
ycfV_S 354954355655
ycfW_S 355655356899
1080224Illuminacontig_0007367180epd_S 8521880 EMBL GBK
pgk_S 19203083
fbaA_S 31814260
yggB_S 44515308
yggA_S 54606095
yggE_S 61856952
KP1_4633_S 1123211561
KP1_4632_S 1172212306
pepP_S 1233013646
KP1_4629_S 1483216034
KP1_4618_S 2717327901
KP1_4617_S 2795128262
yqfA_S 2842629085
KP1_4613_S 3046530731
KP1_4612_S 3071231122
fldB_S 3112931650
xerD_S 3175132647
dsbC_S 3267033383
mrkA 7309673704
mrkB 7380074501
mrkC 7451376999
mrkD 7699077985
mrkF 7799978634
mrkJ 7866979385
mrkI 7952980113
mrkH 8011980823
KP1_4524_S 106339107739
KP1_4523_S 107747109174
KP1_4521_S 109242110015
KP1_4520_S 110012110491
galR_S 110452111468
ygdP_S 119296119826
ptsP_S 119839122085
lgt_S 122331123206
thyA_S 123213124007
ppdA_S 124278124745
argA_S 138389139720
amiC_S 139912141201
cobD_S 141219142295
pduX_S 142299143201
pduW_S 143257144471
KP1_4457_S 169142169867
KP1_4456_S 169864170649
KP1_4455_S 170660171454
KP1_4453_S 172161172898
KP1_4452_S 172900173181
cbiQ_S 173168173845
1080206Illuminacontig_0010363033KP1_2536_S 1904719229 EMBL GBK
KP1_2535_S 1922620176
ydgI_S 2035421736
ydgB_S 2177322495
KP1_2532_S 2249222827
celC_S 261084261431
celA_S 262991263311
osmE_S 263590263928
nadE_S 264211265038
spy_S 266090266572
KP1_2225_S 295603295947
KP1_2224_S 296042296320
yeaA_S 296364296777
gapA 297359297808
KP1_2220_S 298186299070
yeaE_S 299127300011
1080225Illuminacontig_0011357888yjjA_S 7703077521 EMBL GBK
dnaC_S 7758778324
dnaT_S 7832778866
yjjB_S 7896979457
yjjP_S 7943380209
KP1_0775_S 8048981673
KP1_0776_S 8169082571
fhuF_S 8638987177
ycdT_S 8728488330
mtr_S 8848188834
holD_S 9024590658
rimI_S 9062791073
yjjG_S 9108891765
prfC_S 9185693445
deoA_S 99312100634
deoB_S 100687101910
KP1_0801_S 102013102732
lplA_S 102813103829
smp_S 103829104476
serB_S 104560105552
sms_S 105562106944
nadR_S 106966108198
yjjK_S 108292109959
creB_S 115368116057
creC_S 116057117481
arcA_S 118963119679
lasT_S 120312120998
thrA_S 121318123822
thrB_S 123824124753
rpsT (30S ribosomal protein S20) 140193140456
yabF_S 156218156751
kefC_S 156744158609
folA_S 158783159262
apaH_S 159515160363
apaG_S 160368160745
ksgA_S 160748161569
pdxA_S 161566162555
araD_S 178449179144
araA_S 179282180784
araB_S 180795182504
araC_S 182842183687
yabI_S 183816184583
tbpA_S 186841187785
yabN_S 188114189769
KP1_0882_S 189851190009
setA_S 190277191461
gudP_S 191495192805
ilvI_S 206126207850
ilvH_S 207823208344
fruR_S 208525209529
KP1_0903_S 210134210628
mraW_S 210631211572
ftsL_S 211569211934
ftsI_S 211950213716
mutT_S 231687232079
yacG_S 232132232326
KP1_0925_S 232336233079
coaE_S 233079233699
KP1_0927_S 233855233986
guaC_S 234043235086
ppdD_S 237714238145
nadC_S 238327239220
ampD_S 239354239917
ampE_S 239914240768
KP1_0935_S 241004241954
KP1_0936_S 241954243360
lpdA_S 251254252681
KP1_0945_S 252846253130
KP1_0946_S 253175253990
hpt_S 268351268899
yadG_S 269806270732
yadH_S 270729271499
yadI_S 271622272062
KP1_0965_S 272127273374
folK_S 275661276140
yadB_S 277594278475
dksA_S 278535279008
sfsA_S 279153279869
map_S 323064323858
rpsB (30S ribosomal protein S2) 324181324906
tsf_S 325026325877
pyrH_S 326028326753
frr_S 326904327461
ispC_S 327690328892
1080245Illuminacontig_0012311195KP1_4652_S 2442224922 EMBL GBK
endA_S 2496025724
KP1_4654_S 2574126547
gshB_S 2656827518
KP1_4657_S 2769328256
yqgF_S 2825628672
KP1_4731_S 8440085071
ygiC_S 8507786237
ygiD_S 8628287073
ygiE_S 8726088030
ribB_S 8809288745
uppP_S 9764598466
folB_S 9866599051
KP1_4750_S 9915699773
ureD_S 100171100995
ureA_S 101005101307
ureB_S 101317101637
rpsU (30S ribosomal protein S21) 108178108393
KP1_4812_S 154221154721
ygjR_S 154795155784
ygjT_S 156056157027
ygjU_S 157293158540
KP1_4816_S 158556159110
KP1_4822_S 165851166234
KP1_4823_S 166384166752
KP1_4824_S 166798167103
KP1_4825_S 167106167504
KP1_4826_S 167501167797
KP1_4861_S 195993196379
yraO_S 196369196995
yraP_S 197005197580
KP1_4865_S 197702198742
yhbO_S 199465200130
KP1_4868_S 200092200535
KP1_4870_S 200862201365
KP1_4871_S 201359201883
yhbU_S 202105203100
yhbV_S 203091203984
yhbW_S 204128205135
rpsO (30S ribosomal protein S15) 212049212318
infB 214959215276
rpmA (50S ribosomal protein L27) 233423233680
rplU (50S ribosomal protein L21) 233701234012
yrbI_S 242779243345
KP1_4921_S 243342243917
yhbN_S 243886244431
yhbG_S 244438245163
rpoN_S 245211246644
yhbH_S 246667246954
ptsN_S 247025247513
KP1_4927_S 247559248413
ptsO_S 248410248682
rpsI (30S ribosomal protein S9) 266462266854
rplM (50S ribosomal protein L13) 266870267298
mdh 272362272838
KP1_4977_S 291900292091
KP1_4978_S 292305293321
KP1_4979_S 293321293929
KP1_4980_S 294153294605
accB_S 294628295095
accC_S 295106296455
KP1_4984_S 296566296808
prmA_S 298261299142
KP1_4987_S 299112299342
1080240Illuminacontig_0015247106KP1_3440_S 4576746213 EMBL GBK
ycgM_S 4630846967
KP1_3442_S 4698447304
minC_S 4739248090
minD_S 4811448926
minE_S 4893049199
fadD_S 5047452159
yeaY_S 5236552946
yeaZ_S 5298553680
KP1_3451_S 5586856212
KP1_3486_S 8967390056
holE_S 9016090390
exoX_S 9046991128
ptrB_S 9113293192
KP1_3490_S 9331393972
yebG_S 9411294459
purT_S 9460495782
msbB_S 102863103837
KP1_3501_S 103955105274
znuA_S 105290106360
znuC_S 106313107065
znuB_S 107065107850
ruvB_S 107914108924
ruvA_S 108933109544
ftnA_S 136160136657
KP1_3536_S 136693136932
tyrP_S 137124138335
KP1_3538_S 138360139028
dapA4_S 139127140008
KP1_3551_S 157188157619
rcsA_S 157995158618
KP1_3553_S 158651158842
KP1_3554_S 158973159197
yedI_S 161292162203
1080212Illuminacontig_0016202164aroC_S 3349734585 EMBL GBK
mepA_S 3458835412
yfcA_S 3541236221
yfcM_S 3622136769
KP1_3965_S 3680137082
flk_S 4198342960
KP1_3960_S 4295943087
pdxB_S 4307144207
KP1_3958_S 4427145284
truA_S 4528446096
dedA_S 4612346782
accD_S 4690547888
folX_S 5889359255
yfcG_S 5932159950
yfcF_S 6013160769
yfcD_S 6144161992
nuoA_S 7398474430
nuoB_S 7444675120
nuoC_S 7520777015
nuoE_S 7701877518
nuoF_S 7751578852
yejM_S 140324142084
KP1_3855_S 142103142330
yejK_S 142517143524
KP1_3853_S 143544144305
KP1_3852_S 144349144984
rsuA_S 149666150385
bcr_S 150382151578
KP1_3844_S 151910152254
yejE_S 153849154874
folE_S 180240180908
galS_S 182237183259
mglB_S 183556184554
mglA_S 184673186193
1080215Illuminacontig_0013185216yjaB_S 229690 EMBL GBK
metA_S 8471776
aceA_S 37035022
aceK_S 51256909
iclR_S 69607886
pgi 2591426345
KP1_0299_S 5526355679
KP1_0300_S 5568356039
uvrA_S 5604058865
ssb_S 5911759641
KP1_0375_S 129508129828
cbpA_S 129813130730
KP1_0378_S 130876131574
KP1_0379_S 131737132570
hmsS_S 132616133065
efp_S 169440170006
ecnA_S 170080170211
ecnB_S 170371170517
sugE_S 170661170978
blc_S 170975171508
frdD_S 171622172011
1080200Illuminacontig_0017174915ung_S 88699558 EMBL GBK
yfiD_S 987110254
srmB_S 1030011631
yfiC_S 1174212500
nadB_S 1248514104
yfhK_S 3274134180
yfhG_S 3418934896
yfhA_S 3488336220
KP1_4132_S 3628636624
hmpA_S 3669937889
glyA_S 3821539468
suhB_S 5215252955
yfhQ_S 5307653810
iscR_S 5404554536
iscS_S 5471555929
KP1_4113_S 5595656342
iscA_S 5636056683
hscB_S 5675857273
hemF_S 151267152166
amiA_S 152166153038
KP1_4027_S 153088153228
ypeA_S 153235153675
KP1_4024_S 153662154111
KP1_4023_S 154173154748
KP1_4022_S 154843155742
1080237Illuminacontig_0003168492rplT (50S ribosomal protein L20) 7911279468 EMBL GBK
rpmI (50S ribosomal protein L35) 7951979716
KP1_3289_S 8322083978
pfkB_S 8433585267
KP1_3291_S 8536285646
tonB 8684887261
chaC_S 136715137395
chaB_S 137532137762
chaA_S 138026139126
kdsA_S 139213140067
ychQ_S 140923141315
hemK_S 141315142163
prfA_S 142163143245
1080210Illuminacontig_0002136476gst_S 54436048 EMBL GBK
pdxY_S 60916951
tyrS_S 70138287
pdxH_S 84129068
KP1_3049_S 91269449
anmK_S 954210639
ydhM_S 1871019309
nemA_S 1936320460
gloA_S 2053920946
KP1_3065_S 2177922126
ydhO_S 2246723339
1080232Illuminacontig_002094044KP1_0122_S 2951146 EMBL GBK
btuB_S 10912947
KP1_0120_S 29903112
trmA_S 33144414
KP1_0118_S 44664825
yijC_S 48415473
rpmE (50S ribosomal protein L31) 3010130313
cpxP_S 4081841321
cpxR_S 4147142169
cpxA_S 4216643539
KP1_0077_S 4360644280
sodA_S 4435344979
rhaT_S 4526346297
rhaR_S 4633047175
rhaS_S 4724948085
rhaB_S 4839649862
rhaA_S 4985351118
rhaD_S 5126852098
bipA_S 7650478327
glnA_S 7870680115
glnL_S 8030481353
glnG_S 8136282771
hemN_S 8302884401
KP1_0026_S 8459085096
engB_S 8568086312
polA_S 8666089452
1080214Illuminacontig_000889430KP1_4281_S 49566632 EMBL GBK
emrA_S 83239495
emrR_S 962110121
ygaH_S 1024210577
smpB_S 6283663318
KP1_4197_S 6342963905
KP1_4196_S 6389564185
smpA_S 6425264593
ppnK_S 6648967367
grpE_S 6749268082
rpsP (30S ribosomal protein S16) 7208772335
rplS (50S ribosomal protein L19) 7374174088
1080203Illuminacontig_001886651wzi (Wzi outer membrane protein of cps cluster) 71187564 EMBL GBK
1080219Illuminacontig_002186392fadA_S 64937656 EMBL GBK
fre_S 77638464
ubiD_S 85149989
rfaH_S 1016810656
tatD_S 1065311444
tatC_S 1148912268
tatB_S 1227112807
tatA_S 1281113110
ubiB_S 1319214832
KP1_0193_S 1482915434
ubiE_S 1544816203
yigN_S 1627417722
udp_S 1785818619
metR_S 2227523228
yigM_S 2311624015
KP1_0183_S 2410424904
pldB_S 2494925941
rhtB_S 2605126671
yigB_S 3637037086
xerC_S 3708637988
KP1_0169_S 3798538692
dapF_S 3868939516
KP1_0167_S 3954939752
cyaY_S 3989940219
ilvY_S 7538776361
ilvA_S 7635877845
ilvD_S 7790579755
ilvE_S 7981680745
ilvM_S 8076281019
1080201Illuminacontig_002271043dkgB_S 2361039 EMBL GBK
yafC_S 10851990
KP1_1068_S 33794185
yafE_S 42775047
yafP_S 2582026272
pepD_S 2631527772
gpt_S 2803028488
frsA_S 2859429838
crl_S 2989630294
phoE 6763068049
1080202Illuminacontig_001465605hfq_S 77428050 EMBL GBK
hflX_S 81269406
hflK_S 947210734
hflC_S 1073711741
KP1_0445_S 1182412165
KP1_0446_S 1233712534
KP1_0467_S 3059630871
rpsF (30S ribosomal protein S6) 3121231607
priB_S 3176031927
rpsR (30S ribosomal protein S18) 3193232159
rplI (50S ribosomal protein L9) 3220132650
1080233Illuminacontig_002364188yjgB_S 25173536 EMBL GBK
KP1_0569_S 36674551
KP1_0568_S 45415428
KP1_0567_S 54396263
KP1_0517_S 5573856478
KP1_0516_S 5646357566
KP1_0515_S 5647557593
KP1_0514_S 5757758710
KP1_0513_S 5881659460
1080231Illuminacontig_000558758nagD_S 22583010 EMBL GBK
nagC_S 31274347
nagA_S 43565504
nagB_S 56146414
nagE_S 67298684
glnS_S 886310530
metH_S 1058410892
KP1_1656_S 1186912369
KP1_1657_S 1241712749
fur_S 1336613818
fldA_S 1411014709
KP1_1661_S 1479215154
ybfF_S 1521915992
KP1_1663_S 1603216724
cydA_S 4949951070
cydB_S 5108652225
KP1_1696_S 5235752647
KP1_1697_S 5279753201
tolQ_S 5319853890
tolR_S 5389454322
1080199 Illumina contig_0024 42858
1080226Illuminacontig_002542029ybhA_S 2522726045 EMBL GBK
ybhE_S 2627427269
KP1_1726_S 2738027646
KP1_1727_S 2769828003
KP1_1728_S 2813028375
KP1_1729_S 2870529916
KP1_1730_S 3007230806
KP1_1731_S 3084831402
KP1_1732_S 3148431849
KP1_1734_S 3295533878
1080235Illuminacontig_002634424zraP_S 62966733 EMBL GBK
KP1_0242_S 67377438
KP1_0241_S 74457717
KP1_0239_S 79048494
nfi_S 85379208
hemE_S 922110285
nudC_S 1032611099
rsd_S 1119311690
rpoB 2792128421
rplL (50S ribosomal protein L7/L12) 3040230767
rplJ (50S ribosomal protein L10) 3083431331
rplA (50S ribosomal protein L1) 3174532449
rplK (50S ribosomal protein L11) 3245332881
1080221Illuminacontig_002726212yrdA_S 268822 EMBL GBK
KP1_4999_S 7981055
aroE_S 10521870
yrdC_S 18742491
yrdD_S 24512993
KP1_5003_S 30203493
smf_S 34654589
def_S 47185227
KP1_5012_S 1018110549
rplQ (50S ribosomal protein L17) 1065811044
KP1_5015_S 1108512074
rpsD (30S ribosomal protein S4) 1210012720
rpsK (30S ribosomal protein S11) 1275413143
rpsM (30S ribosomal protein S13) 1316013516
rpmJ (50S ribosomal protein L36) 1366313779
secY_S 1381315144
rplO (50S ribosomal protein L15) 1515215586
rpmD (50S ribosomal protein L30) 1559015769
rpsE (30S ribosomal protein S5) 1577316276
rplR (50S ribosomal protein L18) 1629116644
rplF (50S ribosomal protein L6) 1665417187
rpsH (30S ribosomal protein S8) 1720017592
rpsN (30S ribosomal protein S14) 1762617931
rplE (50S ribosomal protein L5) 1794618485
rplX (50S ribosomal protein L24) 1850018814
rplN (50S ribosomal protein L14) 1882519196
rpsQ (30S ribosomal protein S17) 1936219616
rpmC (50S ribosomal protein L29) 1961619807
rplP (50S ribosomal protein L16) 1980720217
rpsC (30S ribosomal protein S3) 2023020928
rplV (50S ribosomal protein L22) 2094621278
rpsS (30S ribosomal protein S19) 2129321571
rplB (50S ribosomal protein L2) 2158822409
rplW (50S ribosomal protein L23) 2242722729
rplD (50S ribosomal protein L4) 2272623331
rplC (50S ribosomal protein L3) 2334223971
rpsJ (30S ribosomal protein S10) 2400424315
1080222Illuminacontig_002820351silA 939712543 EMBL GBK
silR 1578116461
1080209 Illumina contig_0019 11714
1080242 Illumina contig_0029 6960
1080216 Illumina contig_0030 4754
1080243 Illumina contig_0033 2506
1080229 Illumina contig_0034 1445
1080220 Illumina contig_0032 1379
1080234 Illumina contig_0035 1123
1080241 Illumina contig_0031 1087
1080211 Illumina contig_0036 1057
1080198 Illumina contig_0037 795
1080246 Illumina contig_0038 736
1080218 Illumina contig_0039 708
1080223 Illumina contig_0040 685
1080238 Illumina contig_0041 638
1080239 Illumina contig_0042 600
1080217 Illumina contig_0043 577
1080208 Illumina contig_0044 371
1080227 Illumina contig_0045 363
1080205 Illumina contig_0046 339
1080230 Illumina contig_0047 276
1080236 Illumina contig_0048 240
1080213 Illumina contig_0049 224