Sequence bin for SB6430

Contig summary statistics

Contigs
52
Total length
5,074,978
Minimum length
221
Maximum length
885,497
Mean length
97,596
N50
291,009
L50
6
N90
98,233
L90
18
N95
64,820
L95
21

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1079650Illuminacontig_0001885497dapA4_S 71538034 EMBL GBK
KP1_3538_S 81338801
tyrP_S 882610037
KP1_3536_S 1022910468
ftnA_S 1050411001
ruvA_S 3761738228
ruvB_S 3823739247
znuB_S 3931140096
znuC_S 4009640848
znuA_S 4080141871
KP1_3501_S 4188743206
msbB_S 4332444298
purT_S 5137952557
yebG_S 5270253049
KP1_3490_S 5318953848
ptrB_S 5396956029
exoX_S 5603356692
holE_S 5677157001
KP1_3486_S 5710557488
KP1_3451_S 9092191265
yeaZ_S 9345394148
yeaY_S 9418794768
fadD_S 9497496659
minE_S 9793498203
minD_S 9820799019
minC_S 9904399741
KP1_3442_S 99829100149
ycgM_S 100166100825
KP1_3440_S 100920101366
prfA_S 185492186574
hemK_S 186574187422
ychQ_S 187422187814
kdsA_S 188670189524
chaA_S 189610190710
chaB_S 190974191204
chaC_S 191341192021
tonB 241491241904
KP1_3291_S 243106243390
pfkB_S 243485244417
KP1_3289_S 244774245532
rpmI (50S ribosomal protein L35) 249036249233
rplT (50S ribosomal protein L20) 249284249640
ydhO_S 435560436432
KP1_3065_S 436773437120
gloA_S 437953438360
nemA_S 438439439536
ydhM_S 439590440189
anmK_S 448260449357
KP1_3049_S 449450449773
pdxH_S 449831450487
tyrS_S 450612451886
pdxY_S 451948452808
gst_S 452851453456
KP1_2703_S 769459770214
KP1_2702_S 770391770702
KP1_2700_S 771270772298
KP1_2697_S 773901774572
yneH_S 787035787961
yneI_S 788042788935
yneJ_S 789532790410
KP1_2673_S 790364790846
KP1_2672_S 790991791935
blaSHV (SHV beta-lactamase) 816436817293
1079632Illuminacontig_0002583531dkgB_S 3701173 EMBL GBK
yafC_S 12192124
KP1_1068_S 35134319
yafE_S 44115181
yafP_S 2604426496
pepD_S 2653927996
gpt_S 2825428712
frsA_S 2881830062
crl_S 3012030518
phoE 6723567654
KP1_1206_S 133621134523
KP1_1207_S 134790135431
KP1_1209_S 135618136163
KP1_1211_S 138115138981
KP1_1227_S 149743150108
KP1_1228_S 150132150827
tsx_S 150882151766
yajI_S 152065152604
nrdR_S 152752153201
thiJ_S 163172163771
apbA_S 163728164639
KP1_1246_S 164738165322
yajR_S 165366166730
KP1_1248_S 166890168068
KP1_1251_S 169775170593
tig_S 185045186343
clpP_S 186653187276
clpX_S 187527188801
lon_S 188877191339
hupB_S 191549191821
ppiD_S 192036193910
KP1_1275_S 194059194427
ptsG_S 222938223252
lacI_S 224931226001
rpmE (50S ribosomal protein L31) 226117226380
rpmE2_S 226117226380
rpmJ (50S ribosomal protein L36) 226380226520
adk_S 247888248532
hemH_S 248661249623
gsk_S 249687250991
ybaL_S 251027252703
fsr_S 252929254149
betA_S 403435405144
betB_S 405113406585
betT_S 407315409348
ykfE_S 409394409921
KP1_1607_S 487753488550
dcuC_S 488643490016
pagP_S 490355490873
cspE_S 490984491277
KP1_1612_S 491345491728
ybeM_S 491818492606
tatE_S 492849493055
lipA_S 493246494211
ybeF_S 494392495396
KP1_1623_S 502146502613
KP1_1624_S 502617502934
nadD_S 503859504512
holA_S 504502505524
rlpB_S 505533506123
nagD_S 527027527779
nagC_S 527896529116
nagA_S 529125530273
nagB_S 530383531183
nagE_S 531498533447
glnS_S 533626535293
metH_S 535347535655
KP1_1656_S 536632537132
KP1_1657_S 537180537512
fur_S 538127538579
fldA_S 538871539470
KP1_1661_S 539553539915
ybfF_S 539980540753
KP1_1663_S 540793541485
cydA_S 574260575831
cydB_S 575847576986
KP1_1696_S 577118577408
KP1_1697_S 577558577962
tolQ_S 577959578651
tolR_S 578655579083
1079628Illuminacontig_0010346222ispC_S 3020231404 EMBL GBK
frr_S 3163332190
pyrH_S 3234133066
tsf_S 3321734068
rpsB (30S ribosomal protein S2) 3418834913
map_S 3523636030
sfsA_S 7923479950
dksA_S 8009580568
yadB_S 8062881509
folK_S 8296383442
KP1_0965_S 8572986976
yadI_S 8704187481
yadH_S 8760488374
yadG_S 8837189297
hpt_S 9020490752
KP1_0946_S 105121105936
KP1_0945_S 105982106266
lpdA_S 106431107858
KP1_0936_S 115753117159
KP1_0935_S 117159118109
ampE_S 118345119199
ampD_S 119196119759
nadC_S 119893120786
ppdD_S 120968121399
guaC_S 124027125070
KP1_0927_S 125127125258
coaE_S 125414126034
KP1_0925_S 126034126777
yacG_S 126787126981
mutT_S 127034127426
ftsI_S 145397147163
ftsL_S 147179147544
mraW_S 147541148482
KP1_0903_S 148485148979
fruR_S 149584150588
ilvH_S 150769151290
ilvI_S 151263152987
gudP_S 166308167618
setA_S 167652168836
KP1_0882_S 169104169262
yabN_S 169344170999
tbpA_S 171328172272
yabI_S 174530175297
araC_S 175426176271
araB_S 176609178318
araA_S 178329179831
araD_S 179969180664
pdxA_S 196558197547
ksgA_S 197544198365
apaG_S 198368198745
apaH_S 198750199598
folA_S 199850200329
kefC_S 200503202368
yabF_S 202361202894
rpsT (30S ribosomal protein S20) 230878231141
thrB_S 246580247509
thrA_S 247511250015
lasT_S 250335251021
arcA_S 251654252370
creC_S 253852255276
creB_S 255276255965
yjjK_S 261374263041
nadR_S 263135264367
sms_S 264389265771
serB_S 265781266773
smp_S 266857267504
lplA_S 267504268520
KP1_0801_S 268601269320
deoB_S 269423270646
deoA_S 270699272021
prfC_S 277888279477
yjjG_S 279568280245
rimI_S 280260280706
holD_S 280675281088
mtr_S 282499282852
ycdT_S 283003284049
fhuF_S 284156284944
KP1_0776_S 288763289644
KP1_0775_S 289661290845
yjjP_S 291125291901
yjjB_S 291877292365
dnaT_S 292468293007
dnaC_S 293010293747
yjjA_S 293813294304
1079647Illuminacontig_0011330290epd_S 8141842 EMBL GBK
pgk_S 18823045
fbaA_S 31434222
yggB_S 44135270
yggA_S 54226057
yggE_S 61476914
KP1_4633_S 1119411523
KP1_4632_S 1168412268
pepP_S 1229213608
KP1_4629_S 1479415996
KP1_4618_S 2713527863
KP1_4617_S 2791328224
yqfA_S 2838829047
KP1_4613_S 3042730693
KP1_4612_S 3067431084
fldB_S 3109131612
xerD_S 3171332609
dsbC_S 3263233345
mrkA 7304573653
mrkB 7374974450
mrkD 7693977934
mrkF 7794878583
mrkJ 7861879334
mrkH 8006880772
KP1_4524_S 106289107689
KP1_4523_S 107697109124
KP1_4521_S 109192109965
KP1_4520_S 109962110441
galR_S 110402111418
ygdP_S 119246119776
ptsP_S 119789122035
lgt_S 122281123156
thyA_S 123163123957
ppdA_S 124227124694
argA_S 138338139669
amiC_S 139861141150
cobD_S 141168142244
pduX_S 142248143150
pduW_S 143206144420
KP1_4457_S 169092169817
KP1_4456_S 169814170599
KP1_4455_S 170610171404
KP1_4453_S 172111172848
KP1_4452_S 172850173131
cbiQ_S 173118173795
1079634Illuminacontig_0016293690KP1_4652_S 88469346 EMBL GBK
endA_S 938410148
KP1_4654_S 1016510971
gshB_S 1099211942
KP1_4657_S 1211712680
yqgF_S 1268013096
KP1_4731_S 7229272963
ygiC_S 7296974129
ygiD_S 7417474965
ygiE_S 7515275922
ribB_S 7598476637
uppP_S 8553786358
folB_S 8655786943
KP1_4750_S 8704887665
ureD_S 8806388887
ureA_S 8889789199
ureB_S 8920989529
rpsU (30S ribosomal protein S21) 9607096285
KP1_4812_S 142071142571
ygjR_S 142645143634
ygjT_S 143906144877
ygjU_S 145144146391
KP1_4816_S 146407146961
KP1_4822_S 153702154085
KP1_4823_S 154235154603
KP1_4824_S 154649154954
KP1_4825_S 154957155355
KP1_4826_S 155352155648
KP1_4861_S 171195171581
yraO_S 171571172197
yraP_S 172207172782
KP1_4865_S 172904173944
yhbO_S 174667175332
KP1_4868_S 175294175737
KP1_4870_S 176064176567
KP1_4871_S 176561177085
yhbU_S 177307178302
yhbV_S 178293179186
yhbW_S 179330180337
rpsO (30S ribosomal protein S15) 198418198687
infB 201328201645
rpmA (50S ribosomal protein L27) 219792220049
rplU (50S ribosomal protein L21) 220070220381
yrbI_S 229150229716
KP1_4921_S 229713230288
yhbN_S 230257230802
yhbG_S 230809231534
rpoN_S 231582233015
yhbH_S 233038233325
ptsN_S 233396233884
KP1_4927_S 233930234784
ptsO_S 234781235053
rpsI (30S ribosomal protein S9) 252836253228
rplM (50S ribosomal protein L13) 253244253672
mdh 258736259212
KP1_4977_S 278274278465
KP1_4978_S 278680279696
KP1_4979_S 279696280304
KP1_4980_S 280528280980
accB_S 281003281470
accC_S 281481282830
KP1_4984_S 282941283183
prmA_S 284636285517
KP1_4987_S 285487285717
1079621Illuminacontig_0017291009wzi (Wzi outer membrane protein of cps cluster) 76278073 EMBL GBK
mglA_S 9833799857
mglB_S 99976100974
galS_S 101271102293
folE_S 103622104290
yejE_S 129656130681
KP1_3844_S 132276132620
bcr_S 132952134148
rsuA_S 134145134864
KP1_3852_S 139546140181
KP1_3853_S 140225140986
yejK_S 141006142013
KP1_3855_S 142200142427
yejM_S 142446144206
nuoF_S 205643206980
nuoE_S 206977207477
nuoC_S 207480209288
nuoB_S 209375210049
nuoA_S 210065210511
yfcD_S 222504223055
yfcF_S 223727224365
yfcG_S 224546225175
folX_S 225241225603
accD_S 236608237591
dedA_S 237714238373
truA_S 238400239212
KP1_3958_S 239212240225
pdxB_S 240289241425
KP1_3960_S 241409241537
flk_S 241536242513
KP1_3965_S 247414247695
yfcM_S 247727248275
yfcA_S 248275249084
mepA_S 249084249908
aroC_S 249911250999
1079661Illuminacontig_0003268973yieP_S 4081109 EMBL GBK
rbsK_S 35124441
rbsB_S 45455435
rbsC_S 54636428
gidB_S 1811818741
atpI_S 1928619738
atpB_S 1974620561
atpE_S 2061120850
atpF_S 2090721371
rpmH (50S ribosomal protein L34) 4969549835
yicE_S 149433150833
gltS_S 151481152311
glpK_S 152426153937
glpF_S 153959154810
KP1_5367_S 155253155498
sbp_S 155650156639
rpmB (50S ribosomal protein L28) 186209186445
rpmG (50S ribosomal protein L33) 186466186633
KP1_5309_S 205355206302
KP1_5307_S 206306207577
yibO_S 207587209212
yibN_S 209377209808
grxC_S 209913210164
secB_S 210225210692
KP1_5262_S 252735253445
tkrA_S 253553254524
KP1_5260_S 254549255829
KP1_5259_S 255934256869
KP1_5258_S 256873257622
1079629Illuminacontig_0006213484ycfW_S 1016511409 EMBL GBK
ycfV_S 1140912110
ycfU_S 1210313311
mfd_S 1360717053
ycfS_S 1721718176
ycfQ_S 1881219447
KP1_2092_S 2768128037
ptsG2_S 2829929732
ycfH_S 3002930823
holB_S 3083431838
tmk_S 3183532476
yceG_S 3246633488
pabC_S 3349034299
fabF_S 3442535666
fabG_S 3620336937
fabD_S 3695037879
fabH_S 3789538848
plsX_S 3890239999
rpmF (50S ribosomal protein L32) 4020340376
KP1_2077_S 4039340914
yceF_S 4105641640
mdoC_S 6700268162
KP1_2048_S 6819768790
KP1_2047_S 6885769402
ycdZ_S 6953470016
ycdY_S 7012070674
KP1_2044_S 7069771434
pyrD_S 148140149177
ssuE_S 149400149975
ssuA_S 149968150930
ssuD_S 150927152072
ssuC_S 152083152874
KP1_1916_S 182231183460
msbA_S 184492186240
ihfB_S 188747189034
rpsA (30S ribosomal protein S1) 189186190859
1079624Illuminacontig_0018204504celC_S 113371113718 EMBL GBK
celA_S 115279115599
osmE_S 115878116216
nadE_S 116499117326
spy_S 118378118860
KP1_2225_S 156227156571
KP1_2224_S 156666156944
yeaA_S 156988157401
gapA 157983158432
KP1_2220_S 158810159694
yeaE_S 159751160635
1079646Illuminacontig_0007185357ybjE_S 1791818817 EMBL GBK
hcp_S 1896120613
hcr_S 2062421592
KP1_1855_S 3666337379
KP1_1853_S 3862739115
potI_S 3917340060
potH_S 4001540968
ybiR_S 9011991231
mntR_S 9122891701
KP1_1803_S 9188792012
ybiP_S 9227293861
ompX_S 9395294464
ybiF_S 9481695703
dps_S 9594196444
glnH_S 9685397599
KP1_1734_S 160401161324
KP1_1732_S 162429162794
KP1_1731_S 162876163430
KP1_1730_S 163472164206
KP1_1729_S 164362165573
KP1_1728_S 165904166149
KP1_1727_S 166276166581
KP1_1726_S 166633166899
ybhE_S 167010168005
ybhA_S 168234169052
1079631Illuminacontig_0019166951KP1_4022_S 1930020199 EMBL GBK
KP1_4023_S 2029420869
KP1_4024_S 2093121380
ypeA_S 2136721807
KP1_4027_S 2181421954
amiA_S 2200422876
hemF_S 2287623775
hscB_S 116071116586
iscA_S 116661116984
KP1_4113_S 117002117388
iscS_S 117415118629
iscR_S 118808119299
yfhQ_S 119534120268
suhB_S 120389121192
glyA_S 127097128350
hmpA_S 128676129866
KP1_4132_S 129941130279
yfhA_S 130345131682
yfhG_S 131669132376
yfhK_S 132385133824
nadB_S 152461154080
yfiC_S 154065154823
srmB_S 154934156265
yfiD_S 156311156694
ung_S 157007157696
1079655Illuminacontig_0020147609KP1_2536_S 1915719339 EMBL GBK
KP1_2535_S 1933620286
ydgI_S 2046421846
ydgB_S 2188322605
KP1_2532_S 2260222937
1079664Illuminacontig_0015141717hfq_S 77398047 EMBL GBK
hflX_S 81239403
hflK_S 946910731
hflC_S 1073411738
KP1_0445_S 1182112162
KP1_0446_S 1233412531
KP1_0467_S 2929529570
rpsF (30S ribosomal protein S6) 2991130306
priB_S 3045930626
rpsR (30S ribosomal protein S18) 3063130858
rplI (50S ribosomal protein L9) 3090031349
KP1_0513_S 7620276846
KP1_0514_S 7695278085
KP1_0515_S 7806979187
KP1_0516_S 7809679199
KP1_0517_S 7918479924
KP1_0567_S 135347136171
KP1_0568_S 136182137069
KP1_0569_S 137059137943
yjgB_S 138074139093
1079642Illuminacontig_0021140118KP1_3551_S 4606546496 EMBL GBK
rcsA_S 4687247495
KP1_3553_S 4752847719
KP1_3554_S 4785048074
yedI_S 5016951080
1079669Illuminacontig_0012129342yjaB_S 170631 EMBL GBK
metA_S 7881717
aceA_S 36444963
aceK_S 50666850
iclR_S 69017827
pgi 2585426285
KP1_0299_S 5520355619
KP1_0300_S 5562355979
uvrA_S 5598058805
ssb_S 5905759581
1079654Illuminacontig_0005105958asd_S 2125222406 EMBL GBK
glgB_S 2264424830
glgX_S 2492326803
glgC_S 2688428179
glgA_S 2817929612
aroK_S 7073071251
aroB_S 7130772401
dam_S 7385174678
rpe_S 7469675373
gph_S 7536676127
trpS_S 7612077124
cysG_S 7719778570
nirD_S 7872479050
yhfC_S 8314884335
ppiA_S 8461285181
KP1_5076_S 8528885455
KP1_5075_S 8544586047
pabA_S 8608086643
crp_S 9007490706
KP1_5070_S 9101391417
prkB_S 9147292341
KP1_5068_S 9237892596
yheT_S 9259393615
yheS_S 9381995723
rpsL (30S ribosomal protein S12) 102531102905
rpsG (30S ribosomal protein S7) 103002103472
1079622Illuminacontig_002298441KP1_0122_S 3191170 EMBL GBK
btuB_S 11152953
KP1_0120_S 29963118
trmA_S 33204420
KP1_0118_S 44724831
yijC_S 48475479
rpmE (50S ribosomal protein L31) 2911229324
cpxP_S 3982940332
cpxR_S 4048241180
cpxA_S 4117742550
KP1_0077_S 4263243306
sodA_S 4337944005
rhaT_S 4428945323
rhaR_S 4535646201
rhaS_S 4627547111
rhaB_S 4742248888
rhaA_S 4887950144
rhaD_S 5029451124
bipA_S 8076182584
glnA_S 8296384372
glnL_S 8456185610
glnG_S 8561987028
hemN_S 8728588658
KP1_0026_S 8884789353
engB_S 8993790569
polA_S 9091793709
1079625Illuminacontig_000498233KP1_5213_S 4281343844 EMBL GBK
KP1_5210_S 4576346332
prlC_S 5412256164
KP1_5202_S 5611556924
yhiP_S 5707058542
uspA_S 5879959236
yhiO_S 5961959954
pitA_S 6001061506
1079657Illuminacontig_002391745KP1_4281_S 49656641 EMBL GBK
emrA_S 83329504
emrR_S 963010130
ygaH_S 1025110586
smpB_S 6508965571
KP1_4197_S 6568266158
KP1_4196_S 6614866438
smpA_S 6650566846
ppnK_S 6874269620
grpE_S 6974570335
rpsP (30S ribosomal protein S16) 7434074588
rplS (50S ribosomal protein L19) 7599476341
1079620Illuminacontig_002486460fadA_S 64937656 EMBL GBK
fre_S 77648465
ubiD_S 85159990
rfaH_S 1016910657
tatD_S 1065411445
tatC_S 1149012269
tatB_S 1227212808
tatA_S 1281213111
ubiB_S 1319314833
KP1_0193_S 1483015435
ubiE_S 1544916204
yigN_S 1627517723
udp_S 1785918620
metR_S 2227623229
yigM_S 2311724016
KP1_0183_S 2410524905
pldB_S 2495025942
rhtB_S 2605226672
yigB_S 3635937075
xerC_S 3707537977
KP1_0169_S 3797438681
dapF_S 3867839505
KP1_0167_S 3953839741
cyaY_S 3988840208
ilvY_S 7546076434
ilvA_S 7643177918
ilvD_S 7797879828
ilvE_S 7988980818
ilvM_S 8083581092
1079648 Illumina contig_0025 64820
1079623Illuminacontig_001442458efp_S 2668427250 EMBL GBK
ecnA_S 2732427455
ecnB_S 2761527761
sugE_S 2790528222
blc_S 2821928752
frdD_S 2886629255
1079659Illuminacontig_002634452rplK (50S ribosomal protein L11) 15441972 EMBL GBK
rplA (50S ribosomal protein L1) 19762680
rplJ (50S ribosomal protein L10) 30943591
rplL (50S ribosomal protein L7/L12) 36584023
rpoB 60046504
rsd_S 2273523232
nudC_S 2332624099
hemE_S 2414025204
nfi_S 2521725888
KP1_0239_S 2593126521
KP1_0241_S 2670826980
KP1_0242_S 2698727688
zraP_S 2769228129
1079644Illuminacontig_002733740silR 39074587 EMBL GBK
silA 782610972
1079645Illuminacontig_002826207rpsJ (30S ribosomal protein S10) 18982209 EMBL GBK
rplC (50S ribosomal protein L3) 22422871
rplD (50S ribosomal protein L4) 28823487
rplW (50S ribosomal protein L23) 34843786
rplB (50S ribosomal protein L2) 38044625
rpsS (30S ribosomal protein S19) 46424920
rplV (50S ribosomal protein L22) 49355267
rpsC (30S ribosomal protein S3) 52855983
rplP (50S ribosomal protein L16) 59966406
rpmC (50S ribosomal protein L29) 64066597
rpsQ (30S ribosomal protein S17) 65976851
rplN (50S ribosomal protein L14) 70177388
rplX (50S ribosomal protein L24) 73997713
rplE (50S ribosomal protein L5) 77288267
rpsN (30S ribosomal protein S14) 82828587
rpsH (30S ribosomal protein S8) 86219013
rplF (50S ribosomal protein L6) 90269559
rplR (50S ribosomal protein L18) 95699922
rpsE (30S ribosomal protein S5) 993710440
rpmD (50S ribosomal protein L30) 1044410623
rplO (50S ribosomal protein L15) 1062711061
secY_S 1106912400
rpmJ (50S ribosomal protein L36) 1243412550
rpsM (30S ribosomal protein S13) 1269713053
rpsK (30S ribosomal protein S11) 1307013459
rpsD (30S ribosomal protein S4) 1349314113
KP1_5015_S 1413915128
rplQ (50S ribosomal protein L17) 1516915555
KP1_5012_S 1566416032
def_S 2098621495
smf_S 2162422748
KP1_5003_S 2272023193
yrdD_S 2322023762
yrdC_S 2372224339
aroE_S 2434325161
KP1_4999_S 2515825415
yrdA_S 2539125945
1079666 Illumina contig_0029 14780
1079638Illuminacontig_001314603KP1_0375_S 230550 EMBL GBK
cbpA_S 5351452
KP1_0378_S 15982296
KP1_0379_S 24593292
hmsS_S 33383787
1079639 Illumina contig_0030 14588
1079665 Illumina contig_0031 4374
1079643 Illumina contig_0032 2375
1079668 Illumina contig_0009 1743
1079667 Illumina contig_0033 1137
1079637 Illumina contig_0008 1086
1079651 Illumina contig_0034 1013
1079658 Illumina contig_0035 865
1079633 Illumina contig_0036 788
1079619 Illumina contig_0037 701
1079670 Illumina contig_0038 660
1079641 Illumina contig_0039 623
1079663 Illumina contig_0042 541
1079640 Illumina contig_0043 522
1079662 Illumina contig_0041 475
1079630 Illumina contig_0044 462
1079649 Illumina contig_0045 439
1079627 Illumina contig_0046 377
1079653 Illumina contig_0047 362
1079660 Illumina contig_0048 339
1079635 Illumina contig_0049 301
1079652 Illumina contig_0050 275
1079656 Illumina contig_0051 267
1079636 Illumina contig_0052 253
1079626 Illumina contig_0053 221