Sequence bin for INF152

Contig summary statistics

Contigs
31
Total length
5,400,597
Minimum length
304
Maximum length
1,114,072
Mean length
174,213
N50
410,564
L50
5
N90
160,895
L90
12
N95
89,678
L95
14

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6395585Illuminacontig_00011114072yedI_S 8714088051 EMBL GBK
KP1_3554_S 9014690370
KP1_3553_S 9050190692
rcsA_S 9072591348
KP1_3551_S 9172392154
dapA4_S 104014104895
KP1_3538_S 104986105654
tyrP_S 105681106892
KP1_3536_S 107083107322
ftnA_S 107359107856
ruvA_S 134454135065
ruvB_S 135074136084
znuB_S 136148136933
znuC_S 136933137685
znuA_S 137638138707
KP1_3501_S 138723140042
msbB_S 140160141131
purT_S 153495154673
yebG_S 154809155156
KP1_3490_S 155298155960
ptrB_S 156081158141
exoX_S 158145158804
holE_S 158883159113
KP1_3486_S 159218159601
KP1_3451_S 202328202672
yeaZ_S 204860205555
yeaY_S 205594206175
fadD_S 206381208066
minE_S 209341209610
minD_S 209614210426
minC_S 210450211151
KP1_3442_S 211239211559
ycgM_S 211576212235
KP1_3440_S 212330212776
prfA_S 315365316447
hemK_S 316447317295
ychQ_S 317295317687
kdsA_S 318543319397
chaA_S 319485320585
chaB_S 320849321079
chaC_S 321216321896
KP1_3291_S 375747376031
pfkB_S 376124377056
KP1_3289_S 377411378169
rpmI (50S ribosomal protein L35) 381677381874
rplT (50S ribosomal protein L20) 381925382281
ydhO_S 620982621854
KP1_3065_S 622195622542
gloA_S 623375623782
nemA_S 623861624958
ydhM_S 625012625611
anmK_S 633683634780
KP1_3049_S 634873635196
pdxH_S 635254635910
tyrS_S 636035637309
pdxY_S 637370638230
gst_S 638273638878
KP1_2703_S 975054975809
KP1_2702_S 975987976298
KP1_2700_S 976867977895
KP1_2697_S 979498980169
yneH_S 993174994100
yneI_S 994182995075
yneJ_S 995674996552
KP1_2673_S 996506996988
KP1_2672_S 997134998078
blaLEN (LEN beta-lactamase) 10298831030740
6395569Illuminacontig_0002513268yeaE_S 185954186838 EMBL GBK
KP1_2220_S 186894187778
yeaA_S 189186189599
KP1_2224_S 189643189921
KP1_2225_S 190018190362
spy_S 219358219840
nadE_S 220891221718
osmE_S 222001222339
celA_S 222618222938
celC_S 224498224845
KP1_2532_S 490428490763
ydgB_S 490760491482
ydgI_S 491519492901
KP1_2535_S 493079494029
KP1_2536_S 494026494208
6395582Illuminacontig_0003491589epd_S 4841512 EMBL GBK
pgk_S 15522715
fbaA_S 28133892
yggB_S 40844941
yggA_S 50935728
yggE_S 58186585
KP1_4633_S 1115911488
KP1_4632_S 1164912233
pepP_S 1225713570
KP1_4629_S 1475615958
KP1_4618_S 2720727935
KP1_4617_S 2798628297
yqfA_S 2846129120
KP1_4613_S 3076531031
KP1_4612_S 3101231422
fldB_S 3142931950
xerD_S 3205132947
dsbC_S 3297033683
KP1_4524_S 121680123080
KP1_4523_S 123088124515
KP1_4521_S 124583125356
KP1_4520_S 125353125832
galR_S 125793126809
ygdP_S 134637135167
ptsP_S 135180137426
lgt_S 137672138547
thyA_S 138554139348
ppdA_S 139622140089
argA_S 153737155068
amiC_S 155260156549
cobD_S 156567157643
pduX_S 157647158549
pduW_S 158605159819
KP1_4457_S 184507185232
KP1_4456_S 185229186014
KP1_4455_S 186025186819
KP1_4453_S 187526188263
KP1_4452_S 188265188546
cbiQ_S 188533189210
KP1_4281_S 386535388211
emrA_S 389902391074
emrR_S 391200391700
ygaH_S 391821392156
smpB_S 463317463799
KP1_4197_S 463910464386
KP1_4196_S 464376464666
smpA_S 464736465077
ppnK_S 466973467851
grpE_S 467976468566
rpsP (30S ribosomal protein S16) 472550472798
rplS (50S ribosomal protein L19) 474204474551
6395594Illuminacontig_0004411353fsr_S 155083156303 EMBL GBK
ybaL_S 156529158205
gsk_S 158241159545
hemH_S 159609160571
adk_S 160700161344
rpmJ (50S ribosomal protein L36) 182702182842
rpmE2_S 182842183105
rpmE (50S ribosomal protein L31) 182842183105
lacI_S 183222184292
ptsG_S 185971186285
KP1_1275_S 214807215175
ppiD_S 215324217198
hupB_S 217413217685
lon_S 217895220357
clpX_S 220433221707
clpP_S 221958222581
tig_S 222891224189
KP1_1251_S 238637239455
KP1_1248_S 241160242338
yajR_S 242498243862
KP1_1246_S 243905244489
apbA_S 244614245525
thiJ_S 245482246081
nrdR_S 256058256507
yajI_S 256655257194
tsx_S 257497258381
KP1_1228_S 258424259119
KP1_1227_S 259144259509
KP1_1211_S 270274271140
KP1_1209_S 273093273638
KP1_1207_S 273824274465
KP1_1206_S 274734275636
crl_S 379650380048
frsA_S 380106381350
gpt_S 381456381914
pepD_S 382172383629
yafP_S 383672384124
yafE_S 406157406927
KP1_1068_S 407015407821
yafC_S 409210410115
dkgB_S 410161410964
6395584Illuminacontig_0005410564yrdA_S 394948 EMBL GBK
KP1_4999_S 9241181
aroE_S 11781996
yrdC_S 20002617
yrdD_S 25773119
KP1_5003_S 31463619
smf_S 35914715
def_S 48445353
KP1_5012_S 1030710675
rplQ (50S ribosomal protein L17) 1078411170
KP1_5015_S 1121112200
rpsD (30S ribosomal protein S4) 1222612846
rpsK (30S ribosomal protein S11) 1288013269
rpsM (30S ribosomal protein S13) 1328613642
rpmJ (50S ribosomal protein L36) 1378913905
secY_S 1393915270
rplO (50S ribosomal protein L15) 1527815712
rpmD (50S ribosomal protein L30) 1571615895
rpsE (30S ribosomal protein S5) 1589916402
rplR (50S ribosomal protein L18) 1641716770
rplF (50S ribosomal protein L6) 1678017313
rpsH (30S ribosomal protein S8) 1732617718
rpsN (30S ribosomal protein S14) 1775218057
rplE (50S ribosomal protein L5) 1807218611
rplX (50S ribosomal protein L24) 1862618940
rplN (50S ribosomal protein L14) 1895119322
rpsQ (30S ribosomal protein S17) 1948819742
rpmC (50S ribosomal protein L29) 1974219933
rplP (50S ribosomal protein L16) 1993320343
rpsC (30S ribosomal protein S3) 2035621054
rplV (50S ribosomal protein L22) 2107221404
rpsS (30S ribosomal protein S19) 2141921697
rplB (50S ribosomal protein L2) 2171422535
rplW (50S ribosomal protein L23) 2255322855
rplD (50S ribosomal protein L4) 2285223457
rplC (50S ribosomal protein L3) 2346824097
rpsJ (30S ribosomal protein S10) 2413024441
rpsG (30S ribosomal protein S7) 2968130151
rpsL (30S ribosomal protein S12) 3024830622
yheS_S 3743339337
yheT_S 3953940561
KP1_5068_S 4055840776
prkB_S 4081341682
KP1_5070_S 4173842142
crp_S 4244943081
pabA_S 4651247075
KP1_5075_S 4710847710
KP1_5076_S 4770047867
ppiA_S 4797448543
yhfC_S 4882150008
nirD_S 5410654432
cysG_S 5458555958
trpS_S 5603457038
gph_S 5703157792
rpe_S 5778558462
dam_S 5848059307
aroB_S 6076061854
aroK_S 6191062431
glgA_S 103589105022
glgC_S 105022106317
glgX_S 106398108278
glgB_S 108371110557
asd_S 110796111950
pitA_S 170157171653
yhiO_S 171713172048
uspA_S 172431172868
yhiP_S 173125174597
KP1_5202_S 174743175552
prlC_S 175503177545
KP1_5210_S 185343185912
KP1_5213_S 187821188852
KP1_5258_S 245336246085
KP1_5259_S 246089247024
KP1_5260_S 247129248409
tkrA_S 248434249405
KP1_5262_S 249514250224
secB_S 300948301415
grxC_S 301476301727
yibN_S 301832302263
yibO_S 302428304053
KP1_5307_S 304063305334
KP1_5309_S 305338306294
rpmG (50S ribosomal protein L33) 324963325130
rpmB (50S ribosomal protein L28) 325151325387
sbp_S 354377355366
KP1_5367_S 355518355763
glpF_S 356206357057
glpK_S 357079358590
gltS_S 358705359535
yicE_S 360183361583
6395577Illuminacontig_0006359505ispC_S 2895330155 EMBL GBK
frr_S 3038330940
pyrH_S 3109131816
tsf_S 3196432815
rpsB (30S ribosomal protein S2) 3293533660
map_S 3398434778
sfsA_S 7807278788
dksA_S 7893379406
yadB_S 7946680347
folK_S 8180182280
KP1_0965_S 8456785814
yadI_S 8587986319
yadH_S 8644287212
yadG_S 8720988135
hpt_S 8904089588
KP1_0946_S 104134104949
KP1_0945_S 104994105278
lpdA_S 105443106870
KP1_0936_S 114767116173
KP1_0935_S 116173117123
ampE_S 117243118097
ampD_S 118094118657
nadC_S 118791119684
ppdD_S 119866120297
guaC_S 122926123969
KP1_0927_S 124026124157
coaE_S 124313124933
KP1_0925_S 124933125676
yacG_S 125686125880
mutT_S 125933126325
ftsI_S 144297146063
ftsL_S 146079146444
mraW_S 146441147382
KP1_0903_S 147385147879
fruR_S 148484149488
ilvH_S 149669150190
ilvI_S 150163151887
gudP_S 165209166519
setA_S 166564167748
KP1_0882_S 168020168178
yabN_S 168260169915
tbpA_S 170244171188
yabI_S 173446174213
araC_S 174342175187
araB_S 175524177233
araA_S 177244178746
araD_S 178884179579
pdxA_S 195367196356
ksgA_S 196353197174
apaG_S 197177197554
apaH_S 197559198407
folA_S 198700199179
kefC_S 199354201219
yabF_S 201212201745
rpsT (30S ribosomal protein S20) 222918223181
thrB_S 238614239543
thrA_S 239545242049
lasT_S 242369243055
arcA_S 243688244404
creC_S 245886247310
creB_S 247310247999
yjjK_S 253408255075
nadR_S 255333256565
sms_S 256587257969
serB_S 257979258971
smp_S 259055259702
lplA_S 259702260718
KP1_0801_S 260799261518
deoB_S 261621262844
deoA_S 262897264219
prfC_S 268668270257
yjjG_S 270348271025
rimI_S 271040271486
holD_S 271455271868
mtr_S 273512273865
ycdT_S 274016275062
fhuF_S 275174275962
KP1_0776_S 279774280655
KP1_0775_S 280672281856
yjjP_S 282138282914
yjjB_S 282890283378
dnaT_S 283481284020
dnaC_S 284023284760
yjjA_S 284826285320
6395598Illuminacontig_0007354714metA_S 8991828 EMBL GBK
aceA_S 37075026
aceK_S 51296913
iclR_S 69647890
KP1_0299_S 5308853504
KP1_0300_S 5350853864
uvrA_S 5386556690
ssb_S 5694257469
KP1_0375_S 129724130044
cbpA_S 130029130946
KP1_0378_S 131092131790
KP1_0379_S 131952132785
hmsS_S 132832133281
efp_S 166672167238
ecnA_S 167312167443
ecnB_S 167602167748
sugE_S 167891168208
blc_S 168205168738
frdD_S 168852169241
hfq_S 190418190726
hflX_S 190802192082
hflK_S 192148193410
hflC_S 193413194417
KP1_0445_S 194500194841
KP1_0446_S 195014195211
KP1_0467_S 211987212262
rpsF (30S ribosomal protein S6) 212604212999
priB_S 213152213319
rpsR (30S ribosomal protein S18) 213324213551
rplI (50S ribosomal protein L9) 213593214042
KP1_0513_S 260645261289
KP1_0514_S 261403262536
KP1_0515_S 262520263638
KP1_0516_S 262547263650
KP1_0517_S 263635264375
KP1_0567_S 308938309762
KP1_0568_S 309773310660
KP1_0569_S 310650311534
yjgB_S 311665312684
6395586Illuminacontig_0008348605ung_S 92509939 EMBL GBK
yfiD_S 1025110634
srmB_S 1068012011
yfiC_S 1212112879
nadB_S 1286414483
yfhK_S 3311834557
yfhG_S 3456635273
yfhA_S 3526036597
KP1_4132_S 3666337001
hmpA_S 3707638266
glyA_S 3859239845
suhB_S 4575146554
yfhQ_S 4667547409
iscR_S 4766248153
iscS_S 4833349547
KP1_4113_S 4957449960
iscA_S 4997850301
hscB_S 5037650891
hemF_S 148560149459
amiA_S 149459150331
KP1_4027_S 150381150521
ypeA_S 150528150968
KP1_4024_S 150955151404
KP1_4023_S 151466152041
KP1_4022_S 152136153035
aroC_S 206050207138
mepA_S 207141207965
yfcA_S 207965208774
yfcM_S 208774209322
KP1_3965_S 209354209635
flk_S 219250220230
KP1_3960_S 220229220357
pdxB_S 220341221477
KP1_3958_S 221541222554
truA_S 222554223366
dedA_S 223393224052
accD_S 224176225159
folX_S 236175236537
yfcG_S 236603237232
nuoA_S 251271251717
nuoB_S 251733252407
nuoC_S 252495254303
nuoE_S 254306254806
nuoF_S 254803256140
yejM_S 323499325259
KP1_3855_S 325278325505
yejK_S 325692326699
KP1_3853_S 326719327480
KP1_3852_S 327523328158
rsuA_S 332840333559
bcr_S 333556334752
KP1_3844_S 335083335427
yejE_S 337022338047
6395568Illuminacontig_0009291802ycfW_S 1018711431 EMBL GBK
ycfV_S 1143112132
ycfU_S 1212513333
mfd_S 1362917075
ycfS_S 1723918198
ycfQ_S 1883419469
KP1_2092_S 2770128057
ptsG2_S 2831929752
ycfH_S 3004930843
holB_S 3085431858
tmk_S 3185532496
yceG_S 3248633508
pabC_S 3351034319
fabF_S 3444535686
fabG_S 3622336957
fabD_S 3697037899
fabH_S 3791538868
plsX_S 3892340020
rpmF (50S ribosomal protein L32) 4022440397
KP1_2077_S 4041440935
yceF_S 4107741661
mdoC_S 6704668206
KP1_2048_S 6824168834
KP1_2047_S 6890169446
ycdZ_S 6958170063
ycdY_S 7016770721
KP1_2044_S 7074471481
pyrD_S 169099170136
ssuE_S 170360170935
ssuA_S 170928171890
ssuD_S 171887173032
ssuC_S 173043173834
KP1_1916_S 197195198424
msbA_S 199456201204
ihfB_S 203711203998
rpsA (30S ribosomal protein S1) 204150205823
ybjE_S 246471247370
hcp_S 247514249166
hcr_S 249177250145
KP1_1855_S 265220265936
KP1_1853_S 267184267672
potI_S 267730268617
potH_S 268572269525
6395587Illuminacontig_0010285512KP1_4987_S 79228152 EMBL GBK
prmA_S 81229003
KP1_4984_S 1045610698
accC_S 1080912158
accB_S 1216912636
KP1_4980_S 1265913111
KP1_4979_S 1333513943
KP1_4978_S 1394314959
KP1_4977_S 1517315364
rplM (50S ribosomal protein L13) 4870849136
rpsI (30S ribosomal protein S9) 4915249544
ptsO_S 6731767589
KP1_4927_S 6758668440
ptsN_S 6848668974
yhbH_S 6904569332
rpoN_S 6935570788
yhbG_S 7083671561
yhbN_S 7156872113
KP1_4921_S 7208272657
yrbI_S 7265473220
rplU (50S ribosomal protein L21) 8198582296
rpmA (50S ribosomal protein L27) 8231782574
rpsO (30S ribosomal protein S15) 103693103962
yhbW_S 110875111882
yhbV_S 112026112919
yhbU_S 112910113905
KP1_4871_S 114127114651
KP1_4870_S 114645115148
KP1_4868_S 115475115918
yhbO_S 115880116545
KP1_4865_S 117268118308
yraP_S 118430119005
yraO_S 119015119641
KP1_4861_S 119631120017
KP1_4826_S 135423135719
KP1_4825_S 135716136114
KP1_4824_S 136117136422
KP1_4823_S 136468136836
KP1_4822_S 136986137369
KP1_4816_S 144112144666
ygjU_S 144682145929
ygjT_S 146161147132
ygjR_S 147404148393
KP1_4812_S 148467148967
rpsU (30S ribosomal protein S21) 191810192025
ureB_S 198565198885
ureA_S 198895199197
ureD_S 199207200031
KP1_4750_S 200429201046
folB_S 201151201537
uppP_S 201735202556
ribB_S 211456212109
ygiE_S 212171212941
ygiD_S 213128213919
ygiC_S 213960215120
KP1_4731_S 215126215797
yqgF_S 271330271746
KP1_4657_S 271746272309
gshB_S 272484273434
KP1_4654_S 273455274261
endA_S 274278275042
KP1_4652_S 275080275580
6395573Illuminacontig_0011253325betA_S 935711066 EMBL GBK
betB_S 1103512507
betT_S 1323715270
ykfE_S 1531715844
KP1_1607_S 9343994236
dcuC_S 9432995702
pagP_S 9604196559
cspE_S 9667096963
KP1_1612_S 9703097413
ybeM_S 9750398291
tatE_S 9853698742
lipA_S 9895299917
ybeF_S 100098101102
KP1_1623_S 107861108328
KP1_1624_S 108332108649
nadD_S 109574110227
holA_S 110217111239
rlpB_S 111248111838
nagD_S 132856133608
nagC_S 133737134957
nagA_S 134966136114
nagB_S 136228137028
nagE_S 137344139299
glnS_S 139478141145
KP1_1656_S 142486142986
KP1_1657_S 143034143366
fur_S 148450148902
fldA_S 149194149793
KP1_1661_S 149876150238
ybfF_S 150303151076
KP1_1663_S 151116151808
cydA_S 182960184531
cydB_S 184547185686
KP1_1696_S 185940186230
KP1_1697_S 186380186784
tolQ_S 186781187473
tolR_S 187477187905
ybhA_S 209236210054
ybhE_S 210283211278
KP1_1726_S 211386211652
KP1_1727_S 211704212009
KP1_1728_S 212135212380
KP1_1729_S 212711213922
KP1_1730_S 214077214811
KP1_1731_S 214849215403
KP1_1732_S 215486215854
KP1_1734_S 216959217882
6395590Illuminacontig_0012160895wzi (Wzi outer membrane protein of cps cluster) 4944249888 EMBL GBK
mglA_S 137352138872
mglB_S 138991139989
galS_S 140286141308
folE_S 142637143305
6395574Illuminacontig_0013100694polA_S 48277619 EMBL GBK
engB_S 79678599
KP1_0026_S 91849690
hemN_S 987911252
glnG_S 1151312922
glnL_S 1293113980
glnA_S 1416915578
bipA_S 1595717780
rhaD_S 5235553185
rhaA_S 5333754602
rhaB_S 5459356059
rhaS_S 5637057206
rhaR_S 5728058125
rhaT_S 5815859192
sodA_S 5947660102
KP1_0077_S 6017560849
cpxA_S 6091362286
cpxR_S 6228362981
cpxP_S 6313163634
rpmE (50S ribosomal protein L31) 7413374345
yijC_S 9517495806
KP1_0118_S 9582296181
trmA_S 9623697336
KP1_0120_S 9753897660
btuB_S 9770399541
KP1_0122_S 99486100337
6395581Illuminacontig_001489678yieP_S 4311132 EMBL GBK
rbsK_S 35354464
rbsB_S 45685458
rbsC_S 54866451
gidB_S 1814118764
atpI_S 1930919761
atpB_S 1977020585
atpE_S 2063420873
atpF_S 2093021394
rpmH (50S ribosomal protein L34) 4964549785
6395589Illuminacontig_001586629fadA_S 66407803 EMBL GBK
fre_S 79108611
rfaH_S 1031510803
tatD_S 1080011591
tatC_S 1163612415
tatB_S 1241812954
ubiB_S 1333914979
KP1_0193_S 1497615581
ubiE_S 1559516350
yigN_S 1642117869
udp_S 1800518766
metR_S 2242223375
yigM_S 2326324162
KP1_0183_S 2425125051
pldB_S 2509626088
rhtB_S 2619826818
yigB_S 3651837234
xerC_S 3723438136
KP1_0169_S 3813338840
dapF_S 3883739664
KP1_0167_S 3969739900
cyaY_S 4003940359
ilvY_S 7561476588
ilvA_S 7658578072
ilvD_S 7813279982
ilvE_S 8004380972
ilvM_S 8099281249
6395578Illuminacontig_001661845glnH_S 2669727443 EMBL GBK
dps_S 2787428377
ybiF_S 2861529502
ompX_S 2985430369
ybiP_S 3046032049
KP1_1803_S 3230932434
mntR_S 3262033093
ybiR_S 3309034202
6395575Illuminacontig_001734515rplK (50S ribosomal protein L11) 15852013 EMBL GBK
rplA (50S ribosomal protein L1) 20172721
rplJ (50S ribosomal protein L10) 31353632
rplL (50S ribosomal protein L7/L12) 36994064
rsd_S 2277723274
nudC_S 2336824141
hemE_S 2418225246
nfi_S 2525925930
KP1_0239_S 2597326563
KP1_0241_S 2675027022
KP1_0242_S 2702927730
zraP_S 2773428171
6395591 Illumina contig_0018 19189
6395588 Illumina contig_0019 4501
6395596 Illumina contig_0020 1966
6395570 Illumina contig_0021 1569
6395571 Illumina contig_0022 1182
6395583 Illumina contig_0023 529
6395593 Illumina contig_0024 527
6395580 Illumina contig_0025 459
6395579 Illumina contig_0026 376
6395597 Illumina contig_0028 372
6395595 Illumina contig_0027 363
6395592 Illumina contig_0029 354
6395576 Illumina contig_0030 341
6395572 Illumina contig_0031 304