Sequence bin for INF349

Contig summary statistics

Contigs
31
Total length
5,689,814
Minimum length
346
Maximum length
1,049,487
Mean length
183,543
N50
344,386
L50
5
N90
147,202
L90
14
N95
106,681
L95
17

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6395412Illuminacontig_00041049487ycfW_S 1018711431 EMBL GBK
ycfV_S 1143112132
ycfU_S 1212513333
mfd_S 1362917075
ycfS_S 1723918198
ycfQ_S 1883419469
KP1_2092_S 2770128057
ptsG2_S 2831929752
ycfH_S 3004930843
holB_S 3085431858
tmk_S 3185532496
yceG_S 3248633508
pabC_S 3351034319
fabF_S 3444535686
fabG_S 3622336957
fabD_S 3697037899
fabH_S 3791538868
plsX_S 3892340020
rpmF (50S ribosomal protein L32) 4022440397
KP1_2077_S 4041440935
yceF_S 4107741661
mdoC_S 6704768207
KP1_2048_S 6824268835
KP1_2047_S 6890269447
ycdZ_S 6958270064
ycdY_S 7016870722
KP1_2044_S 7074571482
pyrD_S 168843169880
ssuE_S 170102170677
ssuA_S 170670171632
ssuD_S 171629172774
ssuC_S 172785173576
KP1_1916_S 196937198166
msbA_S 199198200946
ihfB_S 203453203740
rpsA (30S ribosomal protein S1) 203892205565
ybjE_S 246042246941
hcp_S 247085248737
hcr_S 248748249716
KP1_1855_S 264791265507
KP1_1853_S 266755267243
potI_S 267301268188
potH_S 268143269096
ybiR_S 318665319777
mntR_S 319774320247
KP1_1803_S 320433320558
ybiP_S 320818322407
ompX_S 322498323013
ybiF_S 323365324252
dps_S 324490324993
glnH_S 325424326170
KP1_1734_S 388191389114
KP1_1732_S 390219390587
KP1_1731_S 390670391224
KP1_1730_S 391262391996
KP1_1729_S 392151393362
KP1_1728_S 393693393938
KP1_1727_S 394064394369
KP1_1726_S 394421394687
ybhE_S 394795395790
ybhA_S 396019396837
tolR_S 417893418321
tolQ_S 418325419017
KP1_1697_S 419014419418
KP1_1696_S 419568419858
cydB_S 420112421251
cydA_S 421267422838
KP1_1663_S 453868454560
ybfF_S 454600455373
KP1_1661_S 455438455800
fldA_S 455883456482
fur_S 456774457226
KP1_1657_S 462310462642
KP1_1656_S 462690463190
metH_S 464168464476
glnS_S 464531466198
nagE_S 466377468332
nagB_S 468648469448
nagA_S 469562470710
nagC_S 470719471939
nagD_S 472068472820
rlpB_S 493838494428
holA_S 494437495459
nadD_S 495449496102
KP1_1624_S 497027497344
KP1_1623_S 497348497815
ybeF_S 504574505578
lipA_S 505759506724
tatE_S 506925507131
ybeM_S 507376508164
KP1_1612_S 508254508637
cspE_S 508704508997
dcuC_S 509965511338
KP1_1607_S 511431512228
ykfE_S 590419590946
betT_S 590993593026
betB_S 593756595228
betA_S 595197596906
fsr_S 779719780939
ybaL_S 781165782841
gsk_S 782877784181
hemH_S 784245785207
adk_S 785336785980
rpmJ (50S ribosomal protein L36) 807338807478
rpmE (50S ribosomal protein L31) 807478807741
rpmE2_S 807478807741
lacI_S 807858808928
ptsG_S 810607810921
KP1_1275_S 839439839807
ppiD_S 839956841830
hupB_S 842045842317
lon_S 842527844989
clpX_S 845065846339
clpP_S 846590847213
tig_S 847523848821
KP1_1251_S 863269864087
KP1_1248_S 865792866970
yajR_S 867130868494
KP1_1246_S 868537869121
apbA_S 869246870157
thiJ_S 870114870713
nrdR_S 880691881140
yajI_S 881288881827
tsx_S 882128883012
KP1_1228_S 883055883750
KP1_1227_S 883775884140
KP1_1211_S 894903895769
KP1_1209_S 897722898267
KP1_1207_S 898453899094
KP1_1206_S 899363900265
crl_S 10177761018174
frsA_S 10182321019476
gpt_S 10195821020040
pepD_S 10202981021755
yafP_S 10217981022250
yafE_S 10442781045048
KP1_1068_S 10451361045942
yafC_S 10473301048235
dkgB_S 10482811049084
6395421Illuminacontig_0003665406gst_S 58936498 EMBL GBK
pdxY_S 65417401
tyrS_S 74628736
pdxH_S 88619517
KP1_3049_S 95759898
anmK_S 999111088
ydhM_S 1916119760
nemA_S 1981420911
gloA_S 2099021397
KP1_3065_S 2223022577
ydhO_S 2291823790
rplT (50S ribosomal protein L20) 222798223154
rpmI (50S ribosomal protein L35) 223205223402
KP1_3289_S 226910227668
pfkB_S 228023228955
KP1_3291_S 229048229332
chaC_S 282989283669
chaB_S 283806284036
chaA_S 284300285400
kdsA_S 285488286342
ychQ_S 287198287590
hemK_S 287590288438
prfA_S 288438289520
KP1_3440_S 392099392545
ycgM_S 392640393299
KP1_3442_S 393316393636
minC_S 393724394425
minD_S 394449395261
minE_S 395265395534
fadD_S 396808398493
yeaY_S 398699399280
yeaZ_S 399319400014
KP1_3451_S 402203402547
KP1_3486_S 436005436388
holE_S 436493436723
exoX_S 436802437461
ptrB_S 437465439525
KP1_3490_S 439646440308
yebG_S 440450440797
purT_S 440933442111
KP1_3501_S 455564456883
znuA_S 456899457968
znuC_S 457921458673
znuB_S 458673459458
ruvB_S 459522460532
ruvA_S 460541461152
ftnA_S 487749488246
KP1_3536_S 488283488522
tyrP_S 488713489924
KP1_3538_S 489950490618
dapA4_S 490709491590
KP1_3551_S 503450503881
rcsA_S 504256504879
KP1_3553_S 504912505103
KP1_3554_S 505234505458
yedI_S 507553508464
6395433Illuminacontig_0002638306KP1_2532_S 139346139681 EMBL GBK
ydgB_S 139678140400
ydgI_S 140437141819
KP1_2535_S 141997142947
KP1_2536_S 142944143126
blaLEN (LEN beta-lactamase) 246959247816
KP1_2672_S 281021281965
KP1_2673_S 282111282593
yneJ_S 282547283425
yneI_S 284024284917
yneH_S 284999285925
KP1_2697_S 300180300851
KP1_2700_S 302454303482
KP1_2702_S 304051304362
KP1_2703_S 304540305295
6395417Illuminacontig_0005457517rplS (50S ribosomal protein L19) 1550415851 EMBL GBK
rpsP (30S ribosomal protein S16) 1725717505
grpE_S 2149022080
ppnK_S 2220523083
smpA_S 2497925320
KP1_4196_S 2539025680
KP1_4197_S 2567026146
smpB_S 2625726739
ygaH_S 9792198256
emrR_S 9837798877
emrA_S 99003100175
KP1_4281_S 101866103542
cbiQ_S 277646278323
KP1_4452_S 278310278591
KP1_4453_S 278593279330
KP1_4455_S 280037280831
KP1_4456_S 280842281627
KP1_4457_S 281624282349
pduW_S 307027308241
pduX_S 308297309199
cobD_S 309203310279
amiC_S 310297311586
argA_S 311778313109
ppdA_S 327146327613
thyA_S 327886328680
lgt_S 328687329562
ptsP_S 329808332054
ygdP_S 332067332597
galR_S 340424341440
KP1_4520_S 341401341880
KP1_4521_S 341877342650
KP1_4523_S 342718344145
KP1_4524_S 344153345553
dsbC_S 423889424602
xerD_S 424625425521
fldB_S 425622426143
KP1_4612_S 426150426560
KP1_4613_S 426541426807
yqfA_S 428192428851
KP1_4617_S 429015429326
KP1_4618_S 429377430105
KP1_4629_S 441354442556
pepP_S 443742445058
KP1_4632_S 445082445666
KP1_4633_S 445827446156
yggE_S 450730451497
yggA_S 451587452222
yggB_S 452375453232
fbaA_S 453424454503
pgk_S 454601455764
epd_S 455804456832
6395418Illuminacontig_0001344386yeaE_S 162728163612 EMBL GBK
KP1_2220_S 163668164552
yeaA_S 165960166373
KP1_2224_S 166417166695
KP1_2225_S 166792167136
spy_S 196131196613
nadE_S 197664198491
osmE_S 198774199112
celA_S 199391199711
celC_S 201271201618
6395407Illuminacontig_0010323609wzi (Wzi outer membrane protein of cps cluster) 4707447520 EMBL GBK
mglA_S 139669141189
mglB_S 141308142306
galS_S 142603143625
folE_S 144954145622
yejE_S 173987175012
KP1_3844_S 176607176951
bcr_S 177282178478
rsuA_S 178475179194
KP1_3852_S 183876184511
KP1_3853_S 184554185315
yejK_S 185335186342
KP1_3855_S 186529186756
yejM_S 186775188535
nuoF_S 255543256880
nuoE_S 256877257377
nuoC_S 257380259188
nuoB_S 259276259950
nuoA_S 259966260412
yfcG_S 274452275081
folX_S 275147275509
accD_S 286524287507
dedA_S 287631288290
truA_S 288317289129
KP1_3958_S 289129290142
pdxB_S 290206291342
KP1_3960_S 291326291454
flk_S 291453292433
KP1_3965_S 302048302329
yfcM_S 302361302909
yfcA_S 302909303718
mepA_S 303718304542
aroC_S 304545305633
6395431Illuminacontig_0011272187KP1_4652_S 993210432 EMBL GBK
endA_S 1047011234
KP1_4654_S 1125112057
gshB_S 1207813028
KP1_4657_S 1320313766
yqgF_S 1376614182
KP1_4731_S 6639167062
ygiC_S 6706868228
ygiD_S 6826969060
ygiE_S 6924770017
ribB_S 7007970732
uppP_S 7963280453
folB_S 8065181037
KP1_4750_S 8114281759
ureD_S 8215782981
ureA_S 8299183293
ureB_S 8330383623
rpsU (30S ribosomal protein S21) 9016390378
KP1_4812_S 166930167430
ygjR_S 167504168493
ygjT_S 168765169736
ygjU_S 169968171215
KP1_4816_S 171231171785
KP1_4822_S 178528178911
KP1_4823_S 179061179429
KP1_4824_S 179475179780
KP1_4825_S 179783180181
KP1_4826_S 180178180474
KP1_4861_S 194653195039
yraO_S 195029195655
yraP_S 195665196240
KP1_4865_S 196362197402
yhbO_S 198125198790
KP1_4868_S 198752199195
KP1_4870_S 199522200025
KP1_4871_S 200019200543
yhbU_S 200765201760
yhbV_S 201751202644
yhbW_S 202788203795
rpsO (30S ribosomal protein S15) 210708210977
rpmA (50S ribosomal protein L27) 232096232353
rplU (50S ribosomal protein L21) 232374232685
yrbI_S 241450242016
KP1_4921_S 242013242588
yhbN_S 242557243102
yhbG_S 243109243834
rpoN_S 243882245315
yhbH_S 245338245625
ptsN_S 245696246184
KP1_4927_S 246230247084
ptsO_S 247081247353
rpsI (30S ribosomal protein S9) 265126265518
rplM (50S ribosomal protein L13) 265534265962
6395432Illuminacontig_0009246527pitA_S 3715438650 EMBL GBK
yhiO_S 3871039045
uspA_S 3942839865
yhiP_S 4012241594
KP1_5202_S 4174042549
prlC_S 4250044542
KP1_5210_S 5234052909
KP1_5213_S 5481855849
KP1_5258_S 112440113189
KP1_5259_S 113193114128
KP1_5260_S 114233115513
tkrA_S 115538116509
KP1_5262_S 116618117328
secB_S 159525159992
grxC_S 160053160304
yibN_S 160409160840
yibO_S 161005162630
KP1_5307_S 162640163911
KP1_5309_S 163915164871
rpmG (50S ribosomal protein L33) 183540183707
rpmB (50S ribosomal protein L28) 183728183964
sbp_S 213918214907
KP1_5367_S 215059215304
glpF_S 215747216598
glpK_S 216620218131
gltS_S 218246219076
yicE_S 219724221124
6395410Illuminacontig_0012231929KP1_4022_S 7970180600 EMBL GBK
KP1_4023_S 8069581270
KP1_4024_S 8133281781
ypeA_S 8176882208
KP1_4027_S 8221582355
amiA_S 8240583277
hemF_S 8327784176
hscB_S 178515179030
iscA_S 179105179428
KP1_4113_S 179446179832
iscS_S 179859181073
iscR_S 181253181744
yfhQ_S 181997182731
suhB_S 182852183655
glyA_S 189561190814
hmpA_S 191140192330
KP1_4132_S 192405192743
yfhA_S 192809194146
yfhG_S 194133194840
yfhK_S 194849196288
nadB_S 214923216542
yfiC_S 216527217285
srmB_S 217395218726
yfiD_S 218772219155
ung_S 219467220156
6395425Illuminacontig_0013224370ispC_S 3090232104 EMBL GBK
frr_S 3233232889
pyrH_S 3304033765
tsf_S 3391334764
rpsB (30S ribosomal protein S2) 3488435609
map_S 3593336727
sfsA_S 8003080746
dksA_S 8089181364
yadB_S 8142482305
folK_S 8375984238
KP1_0965_S 8652587772
yadI_S 8783788277
yadH_S 8840089170
yadG_S 8916790093
hpt_S 9099891546
KP1_0946_S 106112106927
KP1_0945_S 106972107256
lpdA_S 107421108848
KP1_0936_S 116745118151
KP1_0935_S 118151119101
ampE_S 119222120076
ampD_S 120073120636
nadC_S 120770121663
ppdD_S 121845122276
guaC_S 124904125947
KP1_0927_S 126004126135
coaE_S 126291126911
KP1_0925_S 126911127654
yacG_S 127664127858
mutT_S 127911128303
ftsI_S 146275148041
ftsL_S 148057148422
mraW_S 148419149360
KP1_0903_S 149363149857
fruR_S 150462151466
ilvH_S 151648152169
ilvI_S 152142153866
gudP_S 167188168498
setA_S 168543169727
KP1_0882_S 169999170157
yabN_S 170239171894
tbpA_S 172223173167
yabI_S 175425176192
araC_S 176321177166
araB_S 177503179212
araA_S 179223180725
araD_S 180863181558
pdxA_S 197347198336
ksgA_S 198333199154
apaG_S 199157199534
apaH_S 199539200387
folA_S 200680201159
kefC_S 201334203199
yabF_S 203192203725
6395405Illuminacontig_0007222276rplI (50S ribosomal protein L9) 75878036 EMBL GBK
rpsR (30S ribosomal protein S18) 80788305
priB_S 83108477
rpsF (30S ribosomal protein S6) 86309025
KP1_0467_S 93679642
KP1_0446_S 2641826615
KP1_0445_S 2678827129
hflC_S 2721228216
hflK_S 2821929481
hflX_S 2954730827
hfq_S 3090331211
frdD_S 5238252771
blc_S 5288553418
sugE_S 5341553732
ecnB_S 5387654022
ecnA_S 5418154312
efp_S 5438654952
hmsS_S 8934389792
KP1_0379_S 8983990672
KP1_0378_S 9083491532
cbpA_S 9167892595
KP1_0375_S 9258092900
ssb_S 165052165579
uvrA_S 165831168656
KP1_0300_S 168657169013
KP1_0299_S 169017169433
iclR_S 214489215415
aceK_S 215466217250
aceA_S 217353218672
metA_S 220599221528
6395420 Illumina contig_0014 170438
6395408Illuminacontig_0015169350rpsT (30S ribosomal protein S20) 1938419647 EMBL GBK
thrB_S 3485235781
thrA_S 3578338287
lasT_S 3860739293
arcA_S 3992640642
creC_S 4212443548
creB_S 4354844237
yjjK_S 4964651313
nadR_S 5148952721
sms_S 5274354125
serB_S 5413555127
smp_S 5521155858
lplA_S 5585856874
KP1_0801_S 5695557674
deoB_S 5777759000
deoA_S 5905360375
prfC_S 6482466413
yjjG_S 6650467181
rimI_S 6719667642
holD_S 6761168024
mtr_S 6966870021
ycdT_S 7017271218
fhuF_S 7133072118
KP1_0776_S 7593076811
KP1_0775_S 7682878012
yjjP_S 7829479070
yjjB_S 7904679534
dnaT_S 7963780176
dnaC_S 8017980916
yjjA_S 8098281476
6395422Illuminacontig_0006147202yjgB_S 5586256881 EMBL GBK
KP1_0569_S 5701257896
KP1_0568_S 5788658773
KP1_0567_S 5878459608
KP1_0517_S 104506105246
KP1_0516_S 105231106334
KP1_0515_S 105243106361
KP1_0514_S 106345107478
KP1_0513_S 107592108236
6395423Illuminacontig_0016111987rpmH (50S ribosomal protein L34) 6219162331 EMBL GBK
atpF_S 9058291046
atpE_S 9110391342
atpB_S 9139192206
atpI_S 9221592667
gidB_S 9321293835
rbsC_S 105525106490
rbsB_S 106518107408
rbsK_S 107512108441
yieP_S 110844111545
6395406Illuminacontig_0008109648rpsG (30S ribosomal protein S7) 29413411 EMBL GBK
rpsL (30S ribosomal protein S12) 35083882
yheS_S 1069312597
yheT_S 1279913821
KP1_5068_S 1381814036
prkB_S 1407314942
KP1_5070_S 1499815402
crp_S 1570916341
pabA_S 1977220335
KP1_5075_S 2036820970
KP1_5076_S 2096021127
ppiA_S 2123421803
yhfC_S 2208123268
nirD_S 2736627692
cysG_S 2784529218
trpS_S 2929430298
gph_S 3029131052
rpe_S 3104531722
dam_S 3174032567
aroB_S 3402035114
aroK_S 3517035691
glgA_S 7685078283
glgC_S 7828379578
glgX_S 7965981539
glgB_S 8163283818
asd_S 8405785211
6395427Illuminacontig_0017106681polA_S 46097401 EMBL GBK
engB_S 77498381
KP1_0026_S 89669472
hemN_S 966111034
glnG_S 1129512704
glnL_S 1271313762
glnA_S 1395115360
bipA_S 1573917562
rhaD_S 5559156421
rhaA_S 5659857863
rhaB_S 5785459320
rhaS_S 5963160467
rhaR_S 6054161386
rhaT_S 6141962453
sodA_S 6273763363
KP1_0077_S 6343664110
cpxA_S 6417465547
cpxR_S 6554466242
cpxP_S 6639266895
rpmE (50S ribosomal protein L31) 7739477606
yijC_S 101172101804
KP1_0118_S 101820102179
trmA_S 102234103334
KP1_0120_S 103536103658
btuB_S 103701105539
KP1_0122_S 105484106335
6395414Illuminacontig_001886487ilvM_S 53815638 EMBL GBK
ilvE_S 56586587
ilvD_S 66488498
ilvA_S 855810045
ilvY_S 1004211016
cyaY_S 4627146591
KP1_0167_S 4673046933
dapF_S 4696647793
KP1_0169_S 4779048497
xerC_S 4849449396
yigB_S 4939650112
rhtB_S 5979960419
pldB_S 6052961521
KP1_0183_S 6156662366
yigM_S 6245563354
metR_S 6324264195
udp_S 6785268613
yigN_S 6874970197
ubiE_S 7026871023
KP1_0193_S 7103771642
ubiB_S 7163973279
tatB_S 7366474200
tatC_S 7420374982
tatD_S 7502775818
rfaH_S 7581576303
fre_S 7800778708
fadA_S 7881579978
6395409Illuminacontig_001940281KP1_4987_S 81158345 EMBL GBK
prmA_S 83159196
KP1_4984_S 1064910891
accC_S 1100212351
accB_S 1236212829
KP1_4980_S 1285213304
KP1_4978_S 1413615152
KP1_4977_S 1536615557
6395403Illuminacontig_002034540zraP_S 63456782 EMBL GBK
KP1_0242_S 67867487
KP1_0241_S 74947766
KP1_0239_S 79538543
nfi_S 85869257
hemE_S 927010334
nudC_S 1037511148
rsd_S 1124211739
rplL (50S ribosomal protein L7/L12) 3045230817
rplJ (50S ribosomal protein L10) 3088431381
rplA (50S ribosomal protein L1) 3179532499
rplK (50S ribosomal protein L11) 3250332931
6395428Illuminacontig_002126744rpsJ (30S ribosomal protein S10) 23992710 EMBL GBK
rplC (50S ribosomal protein L3) 27433372
rplD (50S ribosomal protein L4) 33833988
rplW (50S ribosomal protein L23) 39854287
rplB (50S ribosomal protein L2) 43055126
rpsS (30S ribosomal protein S19) 51435421
rplV (50S ribosomal protein L22) 54365768
rpsC (30S ribosomal protein S3) 57866484
rplP (50S ribosomal protein L16) 64976907
rpmC (50S ribosomal protein L29) 69077098
rpsQ (30S ribosomal protein S17) 70987352
rplN (50S ribosomal protein L14) 75187889
rplX (50S ribosomal protein L24) 79008214
rplE (50S ribosomal protein L5) 82298768
rpsN (30S ribosomal protein S14) 87839088
rpsH (30S ribosomal protein S8) 91229514
rplF (50S ribosomal protein L6) 952710060
rplR (50S ribosomal protein L18) 1007010423
rpsE (30S ribosomal protein S5) 1043810941
rpmD (50S ribosomal protein L30) 1094511124
rplO (50S ribosomal protein L15) 1112811562
secY_S 1157012901
rpmJ (50S ribosomal protein L36) 1293513051
rpsM (30S ribosomal protein S13) 1319813554
rpsK (30S ribosomal protein S11) 1357113960
rpsD (30S ribosomal protein S4) 1399414614
KP1_5015_S 1464015629
rplQ (50S ribosomal protein L17) 1567016056
KP1_5012_S 1616516533
def_S 2148721996
smf_S 2212523249
KP1_5003_S 2322123694
yrdD_S 2372124263
yrdC_S 2422324840
aroE_S 2484425662
KP1_4999_S 2565925916
yrdA_S 2589226446
6395429 Illumina contig_0022 4509
6395416 Illumina contig_0023 1751
6395413 Illumina contig_0024 1066
6395419 Illumina contig_0025 591
6395424 Illumina contig_0026 528
6395404 Illumina contig_0028 475
6395415 Illumina contig_0027 460
6395411 Illumina contig_0029 379
6395426 Illumina contig_0030 351
6395430 Illumina contig_0031 346