Sequence bin for INF189

Contig summary statistics

Contigs
27
Total length
5,542,904
Minimum length
314
Maximum length
854,332
Mean length
205,293
N50
388,019
L50
5
N90
151,635
L90
12
N95
101,573
L95
14

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6395386Illuminacontig_0001854332KP1_3291_S 2712027404 EMBL GBK
pfkB_S 2749728429
KP1_3289_S 2878429542
rpmI (50S ribosomal protein L35) 3305033247
rplT (50S ribosomal protein L20) 3329833654
ydhO_S 253922254794
KP1_3065_S 255135255482
gloA_S 256315256722
nemA_S 256801257898
ydhM_S 257952258551
anmK_S 266623267720
KP1_3049_S 267813268136
pdxH_S 268194268850
tyrS_S 268975270249
pdxY_S 270310271170
gst_S 271213271818
KP1_2703_S 625224625979
KP1_2702_S 626157626468
KP1_2700_S 627037628065
KP1_2697_S 629668630339
yneH_S 643346644272
yneI_S 644354645247
yneJ_S 645846646724
KP1_2673_S 646678647160
KP1_2672_S 647306648250
blaLEN (LEN beta-lactamase) 681452682309
KP1_2536_S 780885781067
KP1_2535_S 781064782014
ydgI_S 782192783574
ydgB_S 783611784333
KP1_2532_S 784330784665
6395379Illuminacontig_0002715333rplS (50S ribosomal protein L19) 1542515772 EMBL GBK
rpsP (30S ribosomal protein S16) 1717817426
grpE_S 2147722067
ppnK_S 2219223070
smpA_S 2496625307
KP1_4196_S 2537725667
KP1_4197_S 2565726133
smpB_S 2624426726
ygaH_S 9790098235
emrR_S 9835698856
emrA_S 98982100154
KP1_4281_S 101845103521
cbiQ_S 280401281078
KP1_4452_S 281065281346
KP1_4453_S 281348282085
KP1_4455_S 282792283586
KP1_4456_S 283597284382
KP1_4457_S 284379285104
pduW_S 309770310984
pduX_S 311040311942
cobD_S 311946313022
amiC_S 313040314329
argA_S 314521315852
ppdA_S 329500329967
thyA_S 330240331034
lgt_S 331041331916
ptsP_S 332162334408
ygdP_S 334421334951
galR_S 342780343796
KP1_4520_S 343757344236
KP1_4521_S 344233345006
KP1_4523_S 345074346501
KP1_4524_S 346509347909
dsbC_S 439161439874
xerD_S 439897440793
fldB_S 440894441415
KP1_4612_S 441422441832
KP1_4613_S 441813442079
yqfA_S 443724444383
KP1_4617_S 444547444858
KP1_4618_S 444909445637
KP1_4629_S 456885458087
pepP_S 459273460589
KP1_4632_S 460613461197
KP1_4633_S 461358461687
yggE_S 465968466726
yggA_S 466816467451
yggB_S 467603468460
fbaA_S 468652469731
pgk_S 469829470992
epd_S 471032472060
KP1_4652_S 484231484731
endA_S 484769485533
KP1_4654_S 485550486356
gshB_S 486377487327
KP1_4657_S 487502488065
yqgF_S 488065488481
KP1_4731_S 540866541537
ygiC_S 541543542703
ygiD_S 542744543535
ygiE_S 543722544492
ribB_S 544554545207
uppP_S 554107554928
folB_S 555126555512
KP1_4750_S 555617556234
ureD_S 556632557456
ureA_S 557466557768
ureB_S 557778558098
rpsU (30S ribosomal protein S21) 564638564853
KP1_4812_S 607823608323
ygjR_S 608397609386
ygjT_S 609658610629
ygjU_S 610861612108
KP1_4816_S 612124612678
KP1_4822_S 619420619803
KP1_4823_S 619953620321
KP1_4824_S 620367620672
KP1_4825_S 620675621073
KP1_4826_S 621070621366
KP1_4861_S 635816636202
yraO_S 636192636818
yraP_S 636828637403
KP1_4865_S 637525638565
yhbO_S 639288639953
KP1_4868_S 639915640358
KP1_4870_S 640685641188
KP1_4871_S 641182641706
yhbU_S 641928642923
yhbV_S 642914643807
yhbW_S 643951644958
rpsO (30S ribosomal protein S15) 651871652140
rpmA (50S ribosomal protein L27) 673259673516
rplU (50S ribosomal protein L21) 673537673848
yrbI_S 682613683179
KP1_4921_S 683176683751
yhbN_S 683720684265
yhbG_S 684272684997
rpoN_S 685045686478
yhbH_S 686501686788
ptsN_S 686859687347
KP1_4927_S 687393688247
ptsO_S 688244688516
rpsI (30S ribosomal protein S9) 706289706681
rplM (50S ribosomal protein L13) 706697707125
6395389Illuminacontig_0003595389tolR_S 54065834 EMBL GBK
tolQ_S 58386530
KP1_1697_S 65276931
KP1_1696_S 70817371
cydB_S 76258764
cydA_S 878010351
KP1_1663_S 4138142073
ybfF_S 4211342886
KP1_1661_S 4295143313
fldA_S 4339643995
fur_S 4428744739
KP1_1657_S 4982350155
KP1_1656_S 5020350703
metH_S 5168151989
glnS_S 5204453711
nagE_S 5389055845
nagB_S 5616156961
nagA_S 5707558223
nagC_S 5823259452
nagD_S 5958160333
rlpB_S 8135081940
holA_S 8194982971
nadD_S 8296183614
KP1_1624_S 8453984856
KP1_1623_S 8486085327
ybeF_S 9208693090
lipA_S 9327194236
tatE_S 9442894634
ybeM_S 9487995667
KP1_1612_S 9575796140
cspE_S 9620796500
dcuC_S 9746898841
KP1_1607_S 9893499731
ykfE_S 177858178385
betT_S 178432180465
betB_S 181195182667
betA_S 182636184345
fsr_S 330686331906
ybaL_S 332132333808
gsk_S 333844335148
hemH_S 335212336174
adk_S 336303336947
rpmJ (50S ribosomal protein L36) 358313358453
rpmE2_S 358453358716
rpmE (50S ribosomal protein L31) 358453358716
lacI_S 358833359903
ptsG_S 361582361896
KP1_1275_S 390414390782
ppiD_S 390931392805
hupB_S 393020393292
lon_S 393502395964
clpX_S 396040397314
clpP_S 397565398188
tig_S 398498399796
KP1_1251_S 414244415062
KP1_1248_S 416767417945
yajR_S 418105419469
KP1_1246_S 419512420096
apbA_S 420221421132
thiJ_S 421089421688
nrdR_S 431666432115
yajI_S 432263432802
tsx_S 433103433987
KP1_1228_S 434030434725
KP1_1227_S 434750435115
KP1_1211_S 445879446745
KP1_1209_S 448697449242
KP1_1207_S 449428450069
KP1_1206_S 450338451240
crl_S 563402563800
frsA_S 563858565102
gpt_S 565208565666
pepD_S 565924567381
yafP_S 567424567876
yafE_S 589906590676
KP1_1068_S 590764591570
yafC_S 592958593863
dkgB_S 593909594712
6395397Illuminacontig_0004495341wzi (Wzi outer membrane protein of cps cluster) 1750417950 EMBL GBK
mglA_S 109970111490
mglB_S 111607112605
galS_S 112902113924
folE_S 115253115921
yejE_S 144275145300
KP1_3844_S 146895147239
bcr_S 147570148766
rsuA_S 148763149482
KP1_3852_S 154164154799
KP1_3853_S 154842155603
yejK_S 155623156630
KP1_3855_S 156817157044
yejM_S 157063158823
nuoF_S 234761236098
nuoE_S 236095236595
nuoC_S 236598238406
nuoB_S 238494239168
nuoA_S 239184239630
yfcG_S 253670254299
folX_S 254365254727
accD_S 265736266719
dedA_S 266843267502
truA_S 267529268341
KP1_3958_S 268341269354
pdxB_S 269418270554
KP1_3960_S 270538270666
flk_S 270665271645
KP1_3965_S 281260281541
yfcM_S 281573282121
yfcA_S 282121282930
mepA_S 282930283754
aroC_S 283757284845
KP1_4022_S 337816338715
KP1_4023_S 338810339385
KP1_4024_S 339447339896
ypeA_S 339883340323
KP1_4027_S 340330340470
amiA_S 340520341392
hemF_S 341392342291
hscB_S 444808445323
iscA_S 445398445721
KP1_4113_S 445739446125
iscS_S 446152447366
iscR_S 447546448037
yfhQ_S 448290449024
suhB_S 449145449948
glyA_S 455854457107
hmpA_S 457433458623
KP1_4132_S 458698459036
yfhA_S 459102460439
yfhG_S 460426461133
yfhK_S 461142462581
nadB_S 481216482835
yfiC_S 482820483578
srmB_S 483688485019
yfiD_S 485065485448
ung_S 485760486449
6395387Illuminacontig_0005388019celC_S 125058125405 EMBL GBK
celA_S 126965127285
osmE_S 127564127902
nadE_S 128185129012
spy_S 130063130545
KP1_2225_S 159400159744
KP1_2224_S 159841160119
yeaA_S 160163160576
KP1_2220_S 161984162868
yeaE_S 162924163808
ycfW_S 325340326584
ycfV_S 326584327285
ycfU_S 327278328486
mfd_S 328782332228
ycfS_S 332392333351
ycfQ_S 333987334622
KP1_2092_S 342854343210
ptsG2_S 343472344905
ycfH_S 345202345996
holB_S 346007347011
tmk_S 347008347649
yceG_S 347639348661
pabC_S 348663349472
fabF_S 349598350839
fabG_S 351376352110
fabD_S 352123353052
fabH_S 353068354021
plsX_S 354076355173
rpmF (50S ribosomal protein L32) 355377355550
KP1_2077_S 355567356088
yceF_S 356230356814
mdoC_S 382200383360
KP1_2048_S 383395383988
KP1_2047_S 384055384600
ycdZ_S 384735385217
ycdY_S 385321385875
KP1_2044_S 385898386635
6395383Illuminacontig_0006381762ybhA_S 1599716815 EMBL GBK
ybhE_S 1704418039
KP1_1726_S 1814718413
KP1_1727_S 1846518770
KP1_1728_S 1889619141
KP1_1729_S 1947220683
KP1_1730_S 2083821572
KP1_1731_S 2161022164
KP1_1732_S 2224722615
KP1_1734_S 2372024643
glnH_S 8732888074
dps_S 8850589008
ybiF_S 8924690133
ompX_S 9048591000
ybiP_S 9109192680
KP1_1803_S 9294093065
mntR_S 9325193724
ybiR_S 9372194833
potH_S 144375145328
potI_S 145283146170
KP1_1853_S 146228146716
KP1_1855_S 147964148680
hcr_S 163754164722
hcp_S 164733166385
ybjE_S 166529167428
rpsA (30S ribosomal protein S1) 208004209677
ihfB_S 209829210116
msbA_S 212623214371
KP1_1916_S 215403216632
ssuC_S 245890246681
ssuD_S 246692247837
ssuA_S 247834248796
ssuE_S 248789249364
pyrD_S 249586250623
6395392Illuminacontig_0007376790yedI_S 148339149250 EMBL GBK
KP1_3554_S 151345151569
KP1_3553_S 151700151891
rcsA_S 151924152547
KP1_3551_S 152922153353
dapA4_S 165214166095
KP1_3538_S 166186166854
tyrP_S 166880168091
KP1_3536_S 168282168521
ftnA_S 168558169055
ruvA_S 195653196264
ruvB_S 196273197283
znuB_S 197347198132
znuC_S 198132198884
KP1_3501_S 199922201241
msbB_S 201359202330
purT_S 214694215872
yebG_S 216008216355
KP1_3490_S 216497217171
ptrB_S 217292219352
exoX_S 219356220015
holE_S 220094220324
KP1_3486_S 220429220812
KP1_3451_S 254269254613
yeaZ_S 256801257496
yeaY_S 257535258116
fadD_S 258322260007
minE_S 261282261551
minD_S 261555262367
minC_S 262391263092
KP1_3442_S 263180263500
ycgM_S 263517264176
KP1_3440_S 264271264717
prfA_S 343533344615
hemK_S 344615345463
ychQ_S 345463345855
kdsA_S 346711347565
chaA_S 347653348753
chaB_S 349017349247
chaC_S 349384350064
6395402Illuminacontig_0008357109yjaB_S 110571 EMBL GBK
metA_S 7281657
aceA_S 35844903
aceK_S 50066790
iclR_S 68417767
KP1_0299_S 5283853254
KP1_0300_S 5325853614
uvrA_S 5361556440
ssb_S 5669257219
KP1_0375_S 129382129702
cbpA_S 129687130604
KP1_0378_S 130750131448
KP1_0379_S 131610132443
hmsS_S 132490132939
efp_S 167439168005
ecnA_S 168079168210
ecnB_S 168369168515
sugE_S 168659168976
blc_S 168973169506
frdD_S 169620170009
hfq_S 191174191482
hflX_S 191558192838
hflK_S 192904194166
hflC_S 194169195173
KP1_0445_S 195256195597
KP1_0446_S 195770195967
KP1_0467_S 212743213018
rpsF (30S ribosomal protein S6) 213360213755
priB_S 213908214075
rpsR (30S ribosomal protein S18) 214080214307
rplI (50S ribosomal protein L9) 214349214798
KP1_0513_S 261920262564
KP1_0514_S 262678263811
KP1_0515_S 263795264913
KP1_0516_S 263822264925
KP1_0517_S 264910265650
KP1_0567_S 310586311410
KP1_0568_S 311421312308
KP1_0569_S 312298313182
yjgB_S 313313314332
6395380Illuminacontig_0009348825yieP_S 4311132 EMBL GBK
rbsK_S 35354464
rbsB_S 45685458
rbsC_S 54866451
gidB_S 1814118764
atpI_S 1930919761
atpB_S 1977020585
atpE_S 2063420873
atpF_S 2093021394
rpmH (50S ribosomal protein L34) 4964449784
yicE_S 137049138449
gltS_S 139097139927
glpK_S 140042141553
glpF_S 141575142426
KP1_5367_S 142869143114
sbp_S 143266144255
rpmB (50S ribosomal protein L28) 174048174284
rpmG (50S ribosomal protein L33) 174305174472
KP1_5309_S 198380199336
KP1_5307_S 199340200611
yibO_S 200621202246
yibN_S 202411202842
grxC_S 202947203198
secB_S 203259203726
KP1_5262_S 245920246630
tkrA_S 246739247710
KP1_5260_S 247735249015
KP1_5259_S 249120250055
KP1_5258_S 250059250808
KP1_5213_S 307567308598
KP1_5210_S 310517311086
prlC_S 318884320926
KP1_5202_S 320877321686
yhiP_S 321832323304
uspA_S 323561323998
yhiO_S 324381324716
pitA_S 324776326272
6395401Illuminacontig_0010220420ispC_S 2895230154 EMBL GBK
frr_S 3038230939
pyrH_S 3109031815
tsf_S 3196332814
rpsB (30S ribosomal protein S2) 3293433659
map_S 3398234776
sfsA_S 7806478780
dksA_S 7892579398
yadB_S 7945880339
folK_S 8179382272
KP1_0965_S 8455985806
yadI_S 8587186311
yadH_S 8643487204
yadG_S 8720188127
hpt_S 8903289580
KP1_0946_S 104123104938
KP1_0945_S 104983105267
lpdA_S 105432106859
KP1_0936_S 114744116150
KP1_0935_S 116150117100
ampE_S 117220118074
ampD_S 118071118634
nadC_S 118768119661
ppdD_S 119843120274
guaC_S 122902123945
KP1_0927_S 124002124133
coaE_S 124289124909
KP1_0925_S 124909125652
yacG_S 125662125856
mutT_S 125909126301
ftsI_S 144273146039
ftsL_S 146055146420
mraW_S 146417147358
KP1_0903_S 147361147855
fruR_S 148460149464
ilvH_S 149645150166
ilvI_S 150139151863
gudP_S 165185166495
setA_S 166540167724
KP1_0882_S 167996168154
yabN_S 168236169891
tbpA_S 170220171164
yabI_S 173422174189
araC_S 174318175163
araB_S 175500177209
araA_S 177220178722
araD_S 178860179555
pdxA_S 195344196333
ksgA_S 196330197151
apaG_S 197154197531
apaH_S 197536198384
folA_S 198677199156
kefC_S 199331201196
yabF_S 201189201722
6395376Illuminacontig_0011155516rpsT (30S ribosomal protein S20) 1938219645 EMBL GBK
thrB_S 3485035779
thrA_S 3578138285
lasT_S 3860539291
arcA_S 3992440640
creC_S 4211943543
creB_S 4354344232
yjjK_S 4964151308
nadR_S 5148452716
sms_S 5273854120
serB_S 5413055122
smp_S 5520655853
lplA_S 5585356869
KP1_0801_S 5695057669
deoB_S 5777258995
deoA_S 5904860370
prfC_S 6481966408
yjjG_S 6649967176
rimI_S 6719167637
holD_S 6760668019
mtr_S 6966370016
ycdT_S 7016771213
fhuF_S 7132572113
KP1_0776_S 7592576806
KP1_0775_S 7682378007
yjjP_S 7828979065
yjjB_S 7904179529
dnaT_S 7963380172
dnaC_S 8017580912
yjjA_S 8097881472
6395399 Illumina contig_0012 151635
6395385Illuminacontig_0013148585yrdA_S 327881 EMBL GBK
KP1_4999_S 8571114
aroE_S 11111929
yrdC_S 19332550
yrdD_S 25103052
KP1_5003_S 30793552
smf_S 35244648
def_S 47775286
KP1_5012_S 1024010608
rplQ (50S ribosomal protein L17) 1071711103
KP1_5015_S 1114412133
rpsD (30S ribosomal protein S4) 1215912779
rpsK (30S ribosomal protein S11) 1281313202
rpsM (30S ribosomal protein S13) 1321913575
rpmJ (50S ribosomal protein L36) 1372213838
secY_S 1387215203
rplO (50S ribosomal protein L15) 1521115645
rpmD (50S ribosomal protein L30) 1564915828
rpsE (30S ribosomal protein S5) 1583216335
rplR (50S ribosomal protein L18) 1635016703
rplF (50S ribosomal protein L6) 1671317246
rpsH (30S ribosomal protein S8) 1725917651
rpsN (30S ribosomal protein S14) 1768517990
rplE (50S ribosomal protein L5) 1800518544
rplX (50S ribosomal protein L24) 1855918873
rplN (50S ribosomal protein L14) 1888419255
rpsQ (30S ribosomal protein S17) 1942119675
rpmC (50S ribosomal protein L29) 1967519866
rplP (50S ribosomal protein L16) 1986620276
rpsC (30S ribosomal protein S3) 2028920987
rplV (50S ribosomal protein L22) 2100521337
rpsS (30S ribosomal protein S19) 2135221630
rplB (50S ribosomal protein L2) 2164722468
rplW (50S ribosomal protein L23) 2248622788
rplD (50S ribosomal protein L4) 2278523390
rplC (50S ribosomal protein L3) 2340124030
rpsJ (30S ribosomal protein S10) 2406324374
rpsG (30S ribosomal protein S7) 2961430084
rpsL (30S ribosomal protein S12) 3018130555
yheS_S 3736639270
yheT_S 3947240494
KP1_5068_S 4049140709
prkB_S 4074641615
KP1_5070_S 4167142075
crp_S 4238243014
pabA_S 4644547008
KP1_5075_S 4704147643
KP1_5076_S 4763347800
ppiA_S 4790748476
yhfC_S 4875449941
nirD_S 5403954365
cysG_S 5451855891
trpS_S 5596656970
gph_S 5696357724
rpe_S 5771758394
dam_S 5841259239
aroB_S 6069261786
aroK_S 6184262363
glgA_S 103520104953
glgC_S 104953106248
glgX_S 106329108209
glgB_S 108302110488
asd_S 110727111881
6395390Illuminacontig_0014101573polA_S 48227614 EMBL GBK
engB_S 79628594
KP1_0026_S 91799685
hemN_S 987411247
glnG_S 1150812917
glnL_S 1292613975
glnA_S 1416415573
bipA_S 1595217775
rhaD_S 5161952449
rhaA_S 5260153866
rhaB_S 5385755323
rhaS_S 5563456470
rhaR_S 5654457389
rhaT_S 5742258456
sodA_S 5874059366
KP1_0077_S 5943960113
cpxA_S 6017761550
cpxR_S 6154762245
cpxP_S 6239562898
rpmE (50S ribosomal protein L31) 7339873610
yijC_S 9443795069
KP1_0118_S 9508595444
trmA_S 9549996599
KP1_0120_S 9680196923
btuB_S 9696698804
KP1_0122_S 9874999600
6395400Illuminacontig_001586486ilvM_S 53815638 EMBL GBK
ilvE_S 56586587
ilvD_S 66488498
ilvA_S 855810045
ilvY_S 1004211016
cyaY_S 4627146591
KP1_0167_S 4673046933
dapF_S 4696647793
KP1_0169_S 4779048497
xerC_S 4849449396
yigB_S 4939650112
rhtB_S 5979960419
pldB_S 6052961521
KP1_0183_S 6156662366
yigM_S 6245563354
metR_S 6324264195
udp_S 6785168612
yigN_S 6874870196
ubiE_S 7026771022
KP1_0193_S 7103671641
ubiB_S 7163873278
tatB_S 7366374199
tatC_S 7420274981
tatD_S 7502675817
rfaH_S 7581476302
fre_S 7800678707
fadA_S 7881479977
6395382 Illumina contig_0016 68525
6395384Illuminacontig_001740343KP1_4977_S 2478824979 EMBL GBK
KP1_4978_S 2519326209
KP1_4980_S 2704127493
accB_S 2751627983
accC_S 2799429343
KP1_4984_S 2945429696
prmA_S 3114932030
KP1_4987_S 3200032230
6395395Illuminacontig_001834490zraP_S 63086745 EMBL GBK
KP1_0242_S 67497450
KP1_0241_S 74577729
KP1_0239_S 79168506
nfi_S 85499220
hemE_S 923310297
nudC_S 1033811111
rsd_S 1120511702
rplL (50S ribosomal protein L7/L12) 3041530780
rplJ (50S ribosomal protein L10) 3084731344
rplA (50S ribosomal protein L1) 3175832462
rplK (50S ribosomal protein L11) 3246632894
6395398 Illumina contig_0019 8259
6395393 Illumina contig_0020 4376
6395378 Illumina contig_0021 3683
6395377 Illumina contig_0022 2653
6395388 Illumina contig_0023 1495
6395396 Illumina contig_0024 627
6395391 Illumina contig_0025 552
6395381 Illumina contig_0026 472
6395394 Illumina contig_0027 314