Sequence bin for INF047

Contig summary statistics

Contigs
34
Total length
5,544,012
Minimum length
336
Maximum length
1,165,724
Mean length
163,060
N50
456,629
L50
4
N90
107,106
L90
13
N95
86,654
L95
16

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6395159Illuminacontig_00011165724pyrD_S 9090891945 EMBL GBK
ssuE_S 9216792742
ssuA_S 9273593697
ssuD_S 9369494839
ssuC_S 9485095641
KP1_1916_S 124898126127
msbA_S 127159128907
ihfB_S 131414131701
rpsA (30S ribosomal protein S1) 131853133526
ybjE_S 173919174818
hcp_S 174962176614
hcr_S 176625177593
KP1_1855_S 192669193385
KP1_1853_S 194633195121
potI_S 195179196066
potH_S 196021196974
ybiR_S 246529247641
mntR_S 247638248111
KP1_1803_S 248297248422
ybiP_S 248682250271
ompX_S 250362250877
ybiF_S 251229252116
dps_S 252354252857
glnH_S 253288254034
KP1_1734_S 316306317229
KP1_1732_S 318334318702
KP1_1731_S 318785319339
KP1_1730_S 319377320111
KP1_1729_S 320266321477
KP1_1728_S 321809322054
KP1_1727_S 322180322485
KP1_1726_S 322537322803
ybhE_S 322911323906
ybhA_S 324135324953
aroC_S 374433375521
mepA_S 375524376348
yfcA_S 376348377157
yfcM_S 377157377705
KP1_3965_S 377737378018
flk_S 387633388613
KP1_3960_S 388612388740
pdxB_S 388724389860
KP1_3958_S 389924390937
truA_S 390937391749
dedA_S 391776392435
accD_S 392559393542
folX_S 404557404919
yfcG_S 404985405614
nuoA_S 419654420100
nuoB_S 420116420790
nuoC_S 420878422686
nuoE_S 422689423189
nuoF_S 423186424523
yejM_S 491533493293
KP1_3855_S 493312493539
yejK_S 493726494733
KP1_3853_S 494753495514
KP1_3852_S 495557496192
rsuA_S 500874501593
bcr_S 501590502786
KP1_3844_S 503117503461
yejE_S 505056506081
folE_S 534151534819
galS_S 536148537170
mglB_S 537467538465
mglA_S 538584540104
wzi (Wzi outer membrane protein of cps cluster) 628059628505
yedI_S 772986773897
KP1_3554_S 775992776216
KP1_3553_S 776347776538
rcsA_S 776571777194
KP1_3551_S 777569778000
dapA4_S 789860790741
KP1_3538_S 790832791500
tyrP_S 791526792737
KP1_3536_S 792928793167
ftnA_S 793204793701
ruvA_S 820302820913
ruvB_S 820922821932
znuB_S 821996822781
znuC_S 822781823533
znuA_S 823486824555
KP1_3501_S 824571825890
msbB_S 826008826979
purT_S 839343840521
yebG_S 840657841004
KP1_3490_S 841146841808
ptrB_S 841929843989
exoX_S 843993844652
holE_S 844731844961
KP1_3486_S 845066845449
KP1_3451_S 878906879250
yeaZ_S 881438882133
yeaY_S 882172882753
fadD_S 882959884644
minE_S 885919886188
minD_S 886192887004
minC_S 887028887729
KP1_3442_S 887817888137
ycgM_S 888154888813
KP1_3440_S 888908889354
prfA_S 990859991941
hemK_S 991941992789
ychQ_S 992789993181
kdsA_S 994037994891
chaA_S 994979996079
chaB_S 996343996573
chaC_S 996710997390
KP1_3291_S 10585821058866
pfkB_S 10589591059891
KP1_3289_S 10602461061004
rpmI (50S ribosomal protein L35) 10645121064709
rplT (50S ribosomal protein L20) 10647601065116
6395185Illuminacontig_0002680460blaLEN (LEN beta-lactamase) 8007780934 EMBL GBK
KP1_2672_S 114136115080
KP1_2673_S 115226115708
yneJ_S 115662116540
yneI_S 117139118032
yneH_S 118114119040
KP1_2697_S 133302133973
KP1_2700_S 135576136604
KP1_2702_S 137173137484
KP1_2703_S 137662138417
gst_S 491338491943
pdxY_S 491986492846
tyrS_S 492907494181
pdxH_S 494306494962
KP1_3049_S 495020495343
anmK_S 495436496533
ydhM_S 504605505204
nemA_S 505258506355
gloA_S 506434506841
KP1_3065_S 507674508021
ydhO_S 508362509234
6395158Illuminacontig_0005474400yieP_S 4311132 EMBL GBK
rbsK_S 35354464
rbsB_S 45685458
rbsC_S 54866451
gidB_S 1814118764
atpI_S 1930919761
atpB_S 1977020585
atpE_S 2063420873
atpF_S 2093021394
rpmH (50S ribosomal protein L34) 4964549785
yicE_S 137162138562
gltS_S 139210140040
glpK_S 140155141666
glpF_S 141688142539
KP1_5367_S 142982143227
sbp_S 143379144368
rpmB (50S ribosomal protein L28) 174078174314
rpmG (50S ribosomal protein L33) 174335174502
KP1_5309_S 193171194127
KP1_5307_S 194131195402
yibO_S 195412197037
yibN_S 197202197633
grxC_S 197738197989
secB_S 198050198517
KP1_5262_S 240715241425
tkrA_S 241534242505
KP1_5260_S 242530243810
KP1_5259_S 243915244850
KP1_5258_S 244854245603
KP1_5213_S 302060303091
KP1_5210_S 305000305569
prlC_S 313367315409
KP1_5202_S 315360316169
yhiP_S 316315317787
uspA_S 318044318481
yhiO_S 318864319199
pitA_S 319259320755
asd_S 389177390331
glgB_S 390570392756
glgX_S 392849394729
glgC_S 394810396105
glgA_S 396105397538
aroK_S 438697439218
aroB_S 439274440368
dam_S 441821442648
rpe_S 442666443343
gph_S 443336444097
trpS_S 444090445094
cysG_S 445170446543
nirD_S 446696447022
yhfC_S 451120452307
ppiA_S 452585453154
KP1_5076_S 453261453428
KP1_5075_S 453418454020
pabA_S 454053454616
crp_S 458047458679
KP1_5070_S 458986459390
prkB_S 459446460315
KP1_5068_S 460352460570
yheT_S 460567461589
yheS_S 461791463695
rpsL (30S ribosomal protein S12) 470506470880
rpsG (30S ribosomal protein S7) 470977471447
6395178Illuminacontig_0006456629rplS (50S ribosomal protein L19) 1539715744 EMBL GBK
rpsP (30S ribosomal protein S16) 1715017398
grpE_S 2138321973
ppnK_S 2209822976
smpA_S 2487225213
KP1_4196_S 2528325573
KP1_4197_S 2556326039
smpB_S 2615026632
ygaH_S 9781098145
emrR_S 9826698766
emrA_S 98892100064
KP1_4281_S 101755103431
cbiQ_S 277077277754
KP1_4452_S 277741278022
KP1_4453_S 278024278761
KP1_4455_S 279468280262
KP1_4456_S 280273281058
KP1_4457_S 281055281780
pduW_S 306458307672
pduX_S 307728308630
cobD_S 308634309710
amiC_S 309728311017
argA_S 311209312540
ppdA_S 326187326654
thyA_S 326925327719
lgt_S 327726328601
ptsP_S 328847331093
ygdP_S 331106331636
galR_S 339465340481
KP1_4520_S 340442340921
KP1_4521_S 340918341691
KP1_4523_S 341759343186
KP1_4524_S 343194344594
dsbC_S 422885423598
xerD_S 423621424517
fldB_S 424618425139
KP1_4612_S 425146425556
KP1_4613_S 425537425803
yqfA_S 427396428055
KP1_4617_S 428220428531
KP1_4629_S 440559441761
pepP_S 442947444263
KP1_4632_S 444287444871
KP1_4633_S 445032445361
yggE_S 449642450409
yggA_S 450499451134
yggB_S 451286452143
fbaA_S 452335453414
pgk_S 453512454675
epd_S 454715455743
6395173Illuminacontig_0004446116ykfE_S 3347734004 EMBL GBK
betT_S 3405136084
betB_S 3681438286
betA_S 3825539964
fsr_S 200678201898
ybaL_S 202124203800
gsk_S 203836205140
hemH_S 205204206166
adk_S 206295206939
rpmJ (50S ribosomal protein L36) 228297228437
rpmE2_S 228437228700
rpmE (50S ribosomal protein L31) 228437228700
lacI_S 228816229886
ptsG_S 231564231878
KP1_1275_S 260396260764
ppiD_S 260913262787
hupB_S 263002263274
lon_S 263484265946
clpX_S 266022267296
clpP_S 267547268170
tig_S 268480269778
KP1_1251_S 284226285044
KP1_1248_S 286749287927
yajR_S 288087289451
KP1_1246_S 289494290078
apbA_S 290203291114
thiJ_S 291071291670
nrdR_S 301648302097
yajI_S 302245302784
tsx_S 303085303969
KP1_1228_S 304012304707
KP1_1227_S 304732305097
KP1_1211_S 315860316726
KP1_1209_S 318679319224
KP1_1207_S 319410320051
KP1_1206_S 320318321220
crl_S 414227414625
frsA_S 414683415927
gpt_S 416033416491
pepD_S 416749418206
yafP_S 418249418701
yafE_S 440643441413
KP1_1068_S 441501442307
yafC_S 443695444600
dkgB_S 444646445449
6395170Illuminacontig_0007413381celC_S 213239213586 EMBL GBK
celA_S 215146215466
osmE_S 215745216083
nadE_S 216366217193
spy_S 218244218726
KP1_2225_S 247722248066
KP1_2224_S 248163248441
yeaA_S 248485248898
KP1_2220_S 250306251190
yeaE_S 251246252130
6395171Illuminacontig_0008332205metA_S 7621691 EMBL GBK
aceA_S 36184937
aceK_S 50406824
iclR_S 68757801
KP1_0299_S 5285653272
KP1_0300_S 5327653632
uvrA_S 5363356458
ssb_S 5671057237
KP1_0375_S 129354129674
cbpA_S 129659130576
KP1_0378_S 130722131420
KP1_0379_S 131582132415
hmsS_S 132462132911
efp_S 167424167990
ecnA_S 168064168195
ecnB_S 168354168500
sugE_S 168643168960
blc_S 168957169490
frdD_S 169604169993
hfq_S 191164191472
hflX_S 191548192828
hflK_S 192894194156
hflC_S 194159195163
KP1_0445_S 195246195587
KP1_0446_S 195760195957
KP1_0467_S 212733213008
rpsF (30S ribosomal protein S6) 213350213745
priB_S 213898214065
rpsR (30S ribosomal protein S18) 214070214297
rplI (50S ribosomal protein L9) 214339214788
KP1_0513_S 261134261778
KP1_0514_S 261892263025
KP1_0515_S 263009264127
KP1_0516_S 263036264139
KP1_0517_S 264124264864
KP1_0567_S 309084309908
KP1_0568_S 309919310806
KP1_0569_S 310796311680
yjgB_S 311811312830
6395167Illuminacontig_0009262667KP1_4652_S 993310433 EMBL GBK
endA_S 1047111235
KP1_4654_S 1125212058
gshB_S 1207913029
KP1_4657_S 1320413767
yqgF_S 1376714183
KP1_4731_S 6955570226
ygiC_S 7023271392
ygiD_S 7143372224
ygiE_S 7241173181
ribB_S 7324373896
uppP_S 8279583616
folB_S 8381484200
KP1_4750_S 8430584922
ureD_S 8532086144
ureA_S 8615486456
ureB_S 8646686786
rpsU (30S ribosomal protein S21) 9332693541
KP1_4812_S 144619145119
ygjR_S 145193146182
ygjT_S 146454147425
ygjU_S 147657148904
KP1_4816_S 148920149474
KP1_4822_S 156217156600
KP1_4823_S 156750157118
KP1_4824_S 157164157469
KP1_4825_S 157472157870
KP1_4826_S 157867158163
KP1_4861_S 185372185758
yraO_S 185748186374
yraP_S 186384186959
KP1_4865_S 187078188118
yhbO_S 188841189506
KP1_4868_S 189468189911
KP1_4870_S 190238190741
KP1_4871_S 190735191259
yhbU_S 191481192476
yhbV_S 192467193360
yhbW_S 193504194511
rpsO (30S ribosomal protein S15) 201424201693
rpmA (50S ribosomal protein L27) 222812223069
rplU (50S ribosomal protein L21) 223090223401
yrbI_S 232166232732
KP1_4921_S 232729233304
yhbN_S 233273233818
yhbG_S 233825234550
rpoN_S 234598236031
yhbH_S 236054236341
ptsN_S 236412236900
KP1_4927_S 236946237800
ptsO_S 237797238069
rpsI (30S ribosomal protein S9) 255841256233
rplM (50S ribosomal protein L13) 256249256677
6395153Illuminacontig_0010220494ispC_S 2895330155 EMBL GBK
frr_S 3038330940
pyrH_S 3109131816
tsf_S 3196432815
rpsB (30S ribosomal protein S2) 3293533660
map_S 3398334777
sfsA_S 7808078796
dksA_S 7894179414
yadB_S 7947480355
folK_S 8180982288
KP1_0965_S 8457585822
yadI_S 8588786327
yadH_S 8645087220
yadG_S 8721788143
hpt_S 8904889596
KP1_0946_S 104157104972
KP1_0945_S 105017105301
lpdA_S 105466106893
KP1_0936_S 114790116196
KP1_0935_S 116196117146
ampE_S 117266118120
ampD_S 118117118680
nadC_S 118814119707
ppdD_S 119889120320
guaC_S 122948123991
KP1_0927_S 124048124179
coaE_S 124335124955
KP1_0925_S 124955125698
yacG_S 125708125902
mutT_S 125955126347
ftsI_S 144319146085
ftsL_S 146101146466
mraW_S 146463147404
KP1_0903_S 147407147901
fruR_S 148506149510
ilvH_S 149691150212
ilvI_S 150185151909
gudP_S 165231166541
setA_S 166586167770
KP1_0882_S 168042168200
yabN_S 168282169937
tbpA_S 170266171210
yabI_S 173468174235
araC_S 174364175209
araB_S 175546177255
araA_S 177266178768
araD_S 178906179601
pdxA_S 195434196423
ksgA_S 196420197241
apaG_S 197244197621
apaH_S 197626198474
folA_S 198767199246
kefC_S 199421201286
yabF_S 201279201812
6395184Illuminacontig_0011170699yjjA_S 8922289716 EMBL GBK
dnaC_S 8978290519
dnaT_S 9052291061
yjjB_S 9116491652
yjjP_S 9162892404
KP1_0775_S 9268693870
KP1_0776_S 9388794768
fhuF_S 9858099368
ycdT_S 99480100526
mtr_S 100677101030
holD_S 102674103087
rimI_S 103056103502
yjjG_S 103517104194
prfC_S 104285105874
deoA_S 110324111646
deoB_S 111699112922
KP1_0801_S 113025113744
lplA_S 113825114841
smp_S 114841115488
serB_S 115572116564
sms_S 116574117956
nadR_S 117978119210
yjjK_S 119386121053
creB_S 126462127151
creC_S 127151128575
arcA_S 130057130773
lasT_S 131406132092
thrA_S 132412134916
thrB_S 134918135847
rpsT (30S ribosomal protein S20) 151052151315
6395172Illuminacontig_0012169002ung_S 88929581 EMBL GBK
yfiD_S 989310276
srmB_S 1032211653
yfiC_S 1176312521
nadB_S 1250614125
yfhK_S 3276034199
yfhG_S 3420834915
yfhA_S 3490236239
KP1_4132_S 3630536643
hmpA_S 3671837908
glyA_S 3823439487
suhB_S 4539346196
yfhQ_S 4631747051
iscR_S 4730447795
iscS_S 4797549189
KP1_4113_S 4921649602
iscA_S 4962049943
hscB_S 5001850533
hemF_S 144877145776
amiA_S 145776146648
KP1_4027_S 146698146838
ypeA_S 146845147285
KP1_4024_S 147272147721
KP1_4023_S 147783148358
KP1_4022_S 148453149352
6395177Illuminacontig_0003143858tolR_S 54105838 EMBL GBK
tolQ_S 58426534
KP1_1697_S 65316935
cydB_S 76298768
cydA_S 878410355
KP1_1663_S 4138442076
ybfF_S 4211642889
KP1_1661_S 4295443316
fldA_S 4339943998
fur_S 4429044742
KP1_1657_S 4982650158
KP1_1656_S 5020650706
metH_S 5168451992
glnS_S 5204753714
nagE_S 5389355848
nagB_S 5616456964
nagA_S 5707858226
nagC_S 5823559455
nagD_S 5958460336
rlpB_S 8135381943
holA_S 8195282974
nadD_S 8296483617
KP1_1624_S 8454284859
KP1_1623_S 8486385330
ybeF_S 9208993093
lipA_S 9327494239
tatE_S 9443594641
ybeM_S 9488695674
KP1_1612_S 9576496147
cspE_S 9621496507
dcuC_S 9747598848
KP1_1607_S 9894199738
6395162 Illumina contig_0013 107106
6395161Illuminacontig_0014106879polA_S 46387430 EMBL GBK
engB_S 77788410
KP1_0026_S 89959501
hemN_S 969011063
glnG_S 1132412733
glnL_S 1274213791
glnA_S 1398015389
bipA_S 1576817591
rhaD_S 5581556645
rhaA_S 5679758062
rhaB_S 5805359519
rhaS_S 5983060666
rhaR_S 6074061585
rhaT_S 6161862652
sodA_S 6293663562
KP1_0077_S 6363564309
cpxA_S 6437365746
cpxR_S 6574366441
cpxP_S 6659167094
rpmE (50S ribosomal protein L31) 7759377805
yijC_S 101371102003
KP1_0118_S 102019102378
trmA_S 102432103532
KP1_0120_S 103734103856
btuB_S 103899105737
KP1_0122_S 105682106533
6395154Illuminacontig_001592752KP1_2532_S 6966069995 EMBL GBK
ydgB_S 6999270714
ydgI_S 7075172133
KP1_2535_S 7231173261
KP1_2536_S 7325873440
6395179Illuminacontig_001686654ilvM_S 53815638 EMBL GBK
ilvE_S 56586587
ilvD_S 66488498
ilvA_S 855810045
ilvY_S 1004211016
cyaY_S 4627146591
KP1_0167_S 4673046933
dapF_S 4696647793
KP1_0169_S 4779048497
xerC_S 4849449396
yigB_S 4939650112
rhtB_S 5979960419
pldB_S 6052961521
KP1_0183_S 6156662366
yigM_S 6245563354
metR_S 6324264195
udp_S 6785268613
yigN_S 6874970197
ubiE_S 7026871023
KP1_0193_S 7103771642
ubiB_S 7163973279
tatB_S 7366474200
tatC_S 7420374982
tatD_S 7502775818
rfaH_S 7581576303
fre_S 7800778708
fadA_S 7881579978
6395181Illuminacontig_001778067KP1_2044_S 65757312 EMBL GBK
ycdY_S 73357889
ycdZ_S 79938475
KP1_2047_S 86109155
KP1_2048_S 92229815
mdoC_S 985011010
yceF_S 3639636980
KP1_2077_S 3712237643
rpmF (50S ribosomal protein L32) 3766037833
plsX_S 3803739134
fabH_S 3918940142
fabD_S 4015841087
fabG_S 4110041834
fabF_S 4237143612
pabC_S 4373844547
yceG_S 4454945571
tmk_S 4556146202
holB_S 4619947203
ycfH_S 4721448008
ptsG2_S 4830549738
KP1_2092_S 5000050356
ycfQ_S 5858959224
ycfS_S 5986060819
mfd_S 6098364429
ycfU_S 6472565933
ycfV_S 6592666627
ycfW_S 6662767871
6395174Illuminacontig_001842783KP1_4987_S 81138343 EMBL GBK
prmA_S 83139194
KP1_4984_S 1064710889
accC_S 1100012349
accB_S 1236012827
KP1_4980_S 1285013302
KP1_4978_S 1413415150
KP1_4977_S 1536415555
6395155Illuminacontig_001935807rplK (50S ribosomal protein L11) 15982026 EMBL GBK
rplA (50S ribosomal protein L1) 20302734
rplJ (50S ribosomal protein L10) 31493646
rplL (50S ribosomal protein L7/L12) 37134078
rsd_S 2279123288
nudC_S 2338224155
hemE_S 2419625260
nfi_S 2527325944
KP1_0239_S 2598726577
KP1_0241_S 2676427036
KP1_0242_S 2704327744
zraP_S 2774828185
6395169Illuminacontig_002026352yrdA_S 348902 EMBL GBK
KP1_4999_S 8781135
aroE_S 11321950
yrdC_S 19542571
yrdD_S 25313073
KP1_5003_S 31003573
smf_S 35454669
def_S 47985307
KP1_5012_S 1026110629
rplQ (50S ribosomal protein L17) 1073811124
KP1_5015_S 1116512154
rpsD (30S ribosomal protein S4) 1218012800
rpsK (30S ribosomal protein S11) 1283413223
rpsM (30S ribosomal protein S13) 1324013596
rpmJ (50S ribosomal protein L36) 1374313859
secY_S 1389315224
rplO (50S ribosomal protein L15) 1523215666
rpmD (50S ribosomal protein L30) 1567015849
rpsE (30S ribosomal protein S5) 1585316356
rplR (50S ribosomal protein L18) 1637116724
rplF (50S ribosomal protein L6) 1673417267
rpsH (30S ribosomal protein S8) 1728017672
rpsN (30S ribosomal protein S14) 1770618011
rplE (50S ribosomal protein L5) 1802618565
rplX (50S ribosomal protein L24) 1858018894
rplN (50S ribosomal protein L14) 1890519276
rpsQ (30S ribosomal protein S17) 1944219696
rpmC (50S ribosomal protein L29) 1969619887
rplP (50S ribosomal protein L16) 1988720297
rpsC (30S ribosomal protein S3) 2031021008
rplV (50S ribosomal protein L22) 2102621358
rpsS (30S ribosomal protein S19) 2137321651
rplB (50S ribosomal protein L2) 2166822489
rplW (50S ribosomal protein L23) 2250722809
rplD (50S ribosomal protein L4) 2280623411
rplC (50S ribosomal protein L3) 2342224051
rpsJ (30S ribosomal protein S10) 2408424395
6395165 Illumina contig_0021 19327
6395183 Illumina contig_0022 4347
6395176 Illumina contig_0023 1847
6395156 Illumina contig_0024 1024
6395160 Illumina contig_0025 956
6395180 Illumina contig_0026 753
6395175 Illumina contig_0027 583
6395168 Illumina contig_0028 551
6395157 Illumina contig_0029 533
6395163 Illumina contig_0030 482
6395182 Illumina contig_0031 430
6395164 Illumina contig_0032 419
6395186 Illumina contig_0033 389
6395166 Illumina contig_0034 336