Sequence bin for INF058

Contig summary statistics

Contigs
50
Total length
5,825,617
Minimum length
357
Maximum length
1,684,829
Mean length
116,513
N50
354,577
L50
4
N90
97,544
L90
15
N95
60,368
L95
19

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6395144Illuminacontig_00011684829yeaE_S 182834183718 EMBL GBK
KP1_2220_S 183774184658
yeaA_S 186066186479
KP1_2224_S 186523186801
KP1_2225_S 186898187242
spy_S 216239216721
nadE_S 217772218599
osmE_S 218882219220
celA_S 219499219819
celC_S 221379221726
KP1_2532_S 486209486544
ydgB_S 486541487263
ydgI_S 487300488682
KP1_2535_S 488860489810
KP1_2536_S 489807489989
blaLEN (LEN beta-lactamase) 590361591218
KP1_2672_S 622702623646
KP1_2673_S 623792624274
yneJ_S 624228625106
yneI_S 625705626598
yneH_S 626680627606
KP1_2697_S 640613641284
KP1_2700_S 642887643915
KP1_2702_S 644484644795
KP1_2703_S 644973645728
gst_S 10029541003559
pdxY_S 10036021004462
tyrS_S 10045231005797
pdxH_S 10059221006578
KP1_3049_S 10066361006959
anmK_S 10070521008149
ydhM_S 10162211016820
nemA_S 10168741017971
gloA_S 10180501018457
KP1_3065_S 10192901019637
ydhO_S 10199781020850
rplT (50S ribosomal protein L20) 12851481285504
rpmI (50S ribosomal protein L35) 12855551285752
KP1_3289_S 12892601290018
pfkB_S 12903731291305
KP1_3291_S 12913981291682
chaC_S 13456961346376
chaB_S 13465131346743
chaA_S 13470071348107
kdsA_S 13481951349049
ychQ_S 13499051350297
hemK_S 13502971351145
prfA_S 13511451352227
KP1_3440_S 14493251449771
ycgM_S 14498661450525
KP1_3442_S 14505421450862
minC_S 14509501451651
minD_S 14516751452487
minE_S 14524911452760
fadD_S 14540351455720
yeaY_S 14559261456507
yeaZ_S 14565461457241
KP1_3451_S 14594291459773
KP1_3486_S 14932291493612
holE_S 14937171493947
exoX_S 14940261494685
ptrB_S 14946891496749
KP1_3490_S 14968701497532
yebG_S 14976741498021
purT_S 14981571499335
msbB_S 15116991512670
KP1_3501_S 15127881514107
znuC_S 15151451515897
znuB_S 15158971516682
ruvB_S 15167461517756
ruvA_S 15177651518376
ftnA_S 15449791545476
KP1_3536_S 15455131545752
tyrP_S 15459431547154
KP1_3538_S 15471811547849
dapA4_S 15479371548818
KP1_3551_S 15606791561110
rcsA_S 15614851562108
KP1_3553_S 15621411562332
KP1_3554_S 15624631562687
yedI_S 15647821565693
6395105Illuminacontig_0002504897ykfE_S 3390434431 EMBL GBK
betT_S 3447836511
betB_S 3724138713
betA_S 3868240391
fsr_S 240067241287
ybaL_S 241513243189
gsk_S 243225244529
hemH_S 244593245555
adk_S 245684246328
rpmJ (50S ribosomal protein L36) 267694267834
rpmE2_S 267834268097
lacI_S 268214269284
ptsG_S 270963271277
KP1_1275_S 299802300170
ppiD_S 300319302193
hupB_S 302408302680
lon_S 302890305352
clpX_S 305428306702
clpP_S 306953307576
tig_S 307886309184
KP1_1251_S 323635324453
KP1_1248_S 326158327336
yajR_S 327496328860
KP1_1246_S 328903329487
apbA_S 329612330523
thiJ_S 330480331079
nrdR_S 341057341506
yajI_S 341654342193
tsx_S 342494343378
KP1_1228_S 343421344116
KP1_1227_S 344141344506
KP1_1211_S 355269356135
KP1_1209_S 358087358632
KP1_1207_S 358818359459
KP1_1206_S 359727360629
crl_S 472787473185
frsA_S 473243474487
gpt_S 474593475051
pepD_S 475309476766
yafP_S 476809477261
yafE_S 499702500472
KP1_1068_S 500560501366
yafC_S 502754503659
dkgB_S 503705504508
6395114Illuminacontig_0003458347rplS (50S ribosomal protein L19) 1553715884 EMBL GBK
rpsP (30S ribosomal protein S16) 1729017538
grpE_S 2154422134
ppnK_S 2225923137
smpA_S 2503325374
KP1_4196_S 2544425734
KP1_4197_S 2572426200
smpB_S 2631126793
ygaH_S 9037490709
emrR_S 9083091330
emrA_S 9145692628
KP1_4281_S 9431995995
cbiQ_S 278747279424
KP1_4452_S 279411279692
KP1_4453_S 279694280431
KP1_4455_S 281138281932
KP1_4456_S 281943282728
KP1_4457_S 282725283450
pduW_S 308128309342
pduX_S 309398310300
cobD_S 310304311380
amiC_S 311398312687
argA_S 312879314210
ppdA_S 327858328325
thyA_S 328597329391
lgt_S 329398330273
ptsP_S 330519332765
ygdP_S 332778333308
galR_S 341137342153
KP1_4520_S 342114342593
KP1_4521_S 342590343363
KP1_4523_S 343431344858
KP1_4524_S 344866346266
dsbC_S 424661425374
xerD_S 425397426293
fldB_S 426394426915
KP1_4612_S 426922427332
KP1_4613_S 427313427579
yqfA_S 429224429883
KP1_4617_S 430047430358
KP1_4618_S 430409431137
KP1_4629_S 442386443588
pepP_S 444774446090
KP1_4632_S 446114446698
KP1_4633_S 446859447188
yggE_S 451763452530
yggA_S 452620453255
yggB_S 453407454264
fbaA_S 454456455535
pgk_S 455633456796
epd_S 456836457864
6395120Illuminacontig_0004354577yieP_S 4311132 EMBL GBK
rbsK_S 35354464
rbsB_S 45685458
rbsC_S 54866451
gidB_S 1814118764
atpI_S 1930919761
atpB_S 1977020585
atpE_S 2063420873
atpF_S 2093021394
rpmH (50S ribosomal protein L34) 4964649786
yicE_S 138557139957
gltS_S 140605141435
glpK_S 141550143061
glpF_S 143083143934
KP1_5367_S 144377144622
sbp_S 144774145763
rpmB (50S ribosomal protein L28) 173482173718
rpmG (50S ribosomal protein L33) 173739173906
KP1_5309_S 197811198767
KP1_5307_S 198771200042
yibO_S 200052201677
yibN_S 201843202274
grxC_S 202379202630
secB_S 202691203158
KP1_5262_S 253874254584
tkrA_S 254693255664
KP1_5260_S 255689256969
KP1_5259_S 257074258009
KP1_5258_S 258013258762
KP1_5213_S 313308314339
KP1_5210_S 316258316827
prlC_S 324625326667
KP1_5202_S 326618327427
yhiP_S 327573329045
uspA_S 329302329739
yhiO_S 330122330457
pitA_S 330517332013
6395143Illuminacontig_0005349141wzi (Wzi outer membrane protein of cps cluster) 4869049136 EMBL GBK
mglA_S 148234149754
mglB_S 149873150871
galS_S 151168152190
folE_S 153519154187
yejE_S 183111184136
KP1_3844_S 185731186075
bcr_S 186406187602
rsuA_S 187599188318
KP1_3852_S 193000193635
KP1_3853_S 193678194439
yejK_S 194459195466
KP1_3855_S 195653195880
yejM_S 195899197659
nuoF_S 265027266364
nuoE_S 266361266861
nuoC_S 266864268672
nuoB_S 268760269434
nuoA_S 269450269896
yfcG_S 283915284544
folX_S 284610284972
accD_S 295977296960
dedA_S 297083297742
truA_S 297769298581
KP1_3958_S 298581299594
pdxB_S 299658300794
KP1_3960_S 300778300906
flk_S 300905301885
KP1_3965_S 311500311781
yfcM_S 311813312361
yfcA_S 312361313170
mepA_S 313170313994
aroC_S 313997315085
6395111Illuminacontig_0006341055yjaB_S 327788 EMBL GBK
metA_S 9451874
aceA_S 38015120
aceK_S 52237007
iclR_S 70587984
KP1_0299_S 5304053456
KP1_0300_S 5346053816
uvrA_S 5381756642
ssb_S 5689457421
KP1_0375_S 129594129914
cbpA_S 129899130816
KP1_0378_S 130962131660
KP1_0379_S 131822132655
hmsS_S 132702133151
efp_S 166916167482
ecnA_S 167556167687
ecnB_S 167846167992
sugE_S 168136168453
blc_S 168450168983
frdD_S 169097169486
hfq_S 190636190944
hflX_S 191020192300
hflK_S 192366193628
hflC_S 193631194635
KP1_0445_S 194718195059
KP1_0446_S 195232195429
KP1_0467_S 212205212480
rpsF (30S ribosomal protein S6) 212822213217
priB_S 213370213537
rpsR (30S ribosomal protein S18) 213542213769
rplI (50S ribosomal protein L9) 213811214260
KP1_0513_S 261325261969
KP1_0514_S 262083263216
KP1_0515_S 263200264318
KP1_0516_S 263227264330
KP1_0517_S 264315265055
KP1_0567_S 309214310038
KP1_0568_S 310049310936
KP1_0569_S 310926311810
yjgB_S 311941312960
6395125Illuminacontig_0007285799glnH_S 4464945395 EMBL GBK
dps_S 4582646329
ybiF_S 4656747454
ompX_S 4780648321
ybiP_S 4841250001
KP1_1803_S 5026150386
mntR_S 5057251045
ybiR_S 5104252154
potH_S 101816102769
potI_S 102724103611
KP1_1853_S 103669104157
KP1_1855_S 105405106121
hcr_S 121196122164
hcp_S 122175123827
ybjE_S 123971124870
rpsA (30S ribosomal protein S1) 165433167106
ihfB_S 167258167545
msbA_S 170052171800
KP1_1916_S 172832174061
ssuC_S 197422198213
ssuD_S 198224199369
ssuA_S 199366200328
ssuE_S 200321200896
pyrD_S 201118202155
6395117Illuminacontig_0008261808KP1_4652_S 993310433 EMBL GBK
endA_S 1047111235
KP1_4654_S 1125212058
gshB_S 1207913029
KP1_4657_S 1320413767
yqgF_S 1376714183
KP1_4731_S 7234973020
ygiC_S 7302674186
ygiD_S 7422775018
ygiE_S 7520575975
ribB_S 7603776690
uppP_S 8559086411
folB_S 8660986995
KP1_4750_S 8710087717
ureD_S 8811588939
ureA_S 8894989251
ureB_S 8926189581
rpsU (30S ribosomal protein S21) 9611296327
KP1_4812_S 143442143942
ygjR_S 144016145005
ygjT_S 145277146248
ygjU_S 146480147727
KP1_4816_S 147743148297
KP1_4822_S 155040155423
KP1_4823_S 155573155941
KP1_4824_S 155987156292
KP1_4825_S 156295156693
KP1_4826_S 156690156986
KP1_4861_S 184176184562
yraO_S 184552185178
yraP_S 185188185763
KP1_4865_S 185885186925
yhbO_S 187648188313
KP1_4868_S 188275188718
KP1_4870_S 189045189548
KP1_4871_S 189542190066
yhbU_S 190288191283
yhbV_S 191274192167
yhbW_S 192311193318
rpsO (30S ribosomal protein S15) 200231200500
rpmA (50S ribosomal protein L27) 221619221876
rplU (50S ribosomal protein L21) 221897222208
yrbI_S 230973231539
KP1_4921_S 231536232111
yhbN_S 232080232625
yhbG_S 232632233357
rpoN_S 233405234838
yhbH_S 234861235148
ptsN_S 235219235707
KP1_4927_S 235753236607
ptsO_S 236604236876
rpsI (30S ribosomal protein S9) 254649255041
rplM (50S ribosomal protein L13) 255057255485
6395129Illuminacontig_0009220506ispC_S 2901930221 EMBL GBK
frr_S 3044931006
pyrH_S 3115731882
tsf_S 3203032881
rpsB (30S ribosomal protein S2) 3300133726
map_S 3405034844
sfsA_S 7814078856
dksA_S 7900179474
yadB_S 7953480415
folK_S 8186982348
KP1_0965_S 8463685883
yadI_S 8594886388
yadH_S 8651187281
yadG_S 8727888204
hpt_S 8911089658
KP1_0946_S 104207105022
KP1_0945_S 105067105351
lpdA_S 105516106943
KP1_0936_S 114840116246
KP1_0935_S 116246117196
ampE_S 117317118171
ampD_S 118168118731
nadC_S 118865119758
ppdD_S 119940120371
guaC_S 122999124042
KP1_0927_S 124099124230
coaE_S 124386125006
KP1_0925_S 125006125749
yacG_S 125759125953
mutT_S 126006126398
ftsI_S 144370146136
ftsL_S 146152146517
mraW_S 146514147455
KP1_0903_S 147458147952
fruR_S 148557149561
ilvH_S 149742150263
ilvI_S 150236151960
gudP_S 165282166592
setA_S 166637167821
KP1_0882_S 168093168251
yabN_S 168333169988
tbpA_S 170317171261
yabI_S 173519174286
araC_S 174415175260
araB_S 175597177306
araA_S 177317178819
araD_S 178957179652
pdxA_S 195441196430
ksgA_S 196427197248
apaG_S 197251197628
apaH_S 197633198481
folA_S 198774199253
kefC_S 199428201293
yabF_S 201286201819
6395145Illuminacontig_0010177832rpsT (30S ribosomal protein S20) 1938719650 EMBL GBK
thrB_S 3508236011
thrA_S 3601338517
lasT_S 3883739523
arcA_S 4015640872
creC_S 4235443778
creB_S 4377844467
yjjK_S 4987651543
nadR_S 5171952951
sms_S 5297354355
serB_S 5436555357
smp_S 5544156088
lplA_S 5608857104
KP1_0801_S 5718457903
deoB_S 5800659229
deoA_S 5928260604
prfC_S 6505366642
yjjG_S 6673367410
rimI_S 6742567871
holD_S 6784068253
mtr_S 6989770250
ycdT_S 7040171447
fhuF_S 7155972347
KP1_0776_S 7615977040
KP1_0775_S 7705778241
yjjP_S 7852379299
yjjB_S 7927579763
dnaT_S 7986680405
dnaC_S 8040881145
yjjA_S 8121181705
6395109Illuminacontig_0011176838ung_S 87279416 EMBL GBK
yfiD_S 972710110
srmB_S 1015511486
yfiC_S 1159612354
nadB_S 1233913958
yfhK_S 3259334032
yfhG_S 3404134748
yfhA_S 3473536072
KP1_4132_S 3613836476
hmpA_S 3655137741
glyA_S 3806739320
suhB_S 4522646029
yfhQ_S 4615046884
iscR_S 4713747628
iscS_S 4780849022
KP1_4113_S 4904949435
iscA_S 4945349776
hscB_S 4985150366
hemF_S 152908153807
amiA_S 153807154679
ypeA_S 154875155315
KP1_4024_S 155302155751
KP1_4023_S 155813156388
KP1_4022_S 156483157382
6395119Illuminacontig_0012144044KP1_1607_S 4428145078 EMBL GBK
dcuC_S 4517146544
pagP_S 4688347401
cspE_S 4751247805
KP1_1612_S 4787248255
ybeM_S 4834549133
tatE_S 4937849584
lipA_S 4978550750
ybeF_S 5093151935
KP1_1623_S 5869459161
KP1_1624_S 5916559482
nadD_S 6040761060
holA_S 6105062072
rlpB_S 6208162671
nagD_S 8368984441
nagC_S 8457085790
nagA_S 8579986947
nagB_S 8706187861
nagE_S 8817790132
glnS_S 9031191978
KP1_1656_S 9331793817
KP1_1657_S 9386594197
fur_S 9928199733
fldA_S 100025100624
KP1_1661_S 100707101069
ybfF_S 101134101907
KP1_1663_S 101947102639
cydA_S 133685135256
cydB_S 135272136411
KP1_1697_S 137105137509
tolQ_S 137506138198
tolR_S 138202138630
6395132Illuminacontig_0013121815rpsG (30S ribosomal protein S7) 29413411 EMBL GBK
rpsL (30S ribosomal protein S12) 35083882
yheS_S 1069312597
yheT_S 1279913821
KP1_5068_S 1381814036
prkB_S 1407314942
KP1_5070_S 1499815402
crp_S 1570916341
pabA_S 1977220335
KP1_5075_S 2036820970
KP1_5076_S 2096021127
ppiA_S 2123421803
yhfC_S 2208123268
nirD_S 2736627692
cysG_S 2784529218
trpS_S 2929430298
gph_S 3029131052
rpe_S 3104531722
dam_S 3174032567
aroB_S 3402035114
aroK_S 3517035691
glgA_S 7684978282
glgC_S 7828279577
glgX_S 7965881538
glgB_S 8163183817
asd_S 8405685210
6395142Illuminacontig_0014112527polA_S 52358027 EMBL GBK
engB_S 83759007
KP1_0026_S 959210098
hemN_S 1028711660
glnG_S 1192113330
glnL_S 1333914388
glnA_S 1457715986
bipA_S 1636518188
rhaD_S 6140662236
rhaA_S 6238863653
rhaB_S 6364465110
rhaS_S 6542066256
rhaR_S 6633067175
rhaT_S 6720868242
sodA_S 6852669152
KP1_0077_S 6922569899
cpxA_S 6996371336
cpxR_S 7133372031
cpxP_S 7218172684
rpmE (50S ribosomal protein L31) 8318483396
yijC_S 107030107662
KP1_0118_S 107678108037
trmA_S 108092109192
KP1_0120_S 109394109516
btuB_S 109559111415
KP1_0122_S 111360112211
6395148 Illumina contig_0015 97544
6395112Illuminacontig_001686730fadA_S 66627825 EMBL GBK
fre_S 79328633
rfaH_S 1033710825
tatD_S 1082211613
tatC_S 1165812437
tatB_S 1244012976
ubiB_S 1336115001
KP1_0193_S 1499815603
ubiE_S 1561716372
yigN_S 1644317891
udp_S 1802718788
metR_S 2244123394
yigM_S 2328224181
KP1_0183_S 2427025070
pldB_S 2511526107
rhtB_S 2621726837
yigB_S 3652437240
xerC_S 3724038142
KP1_0169_S 3813938846
dapF_S 3884339670
KP1_0167_S 3970339906
cyaY_S 4004540365
ilvY_S 7562076594
ilvA_S 7659178078
ilvD_S 7813879988
ilvE_S 8004980978
ilvM_S 8099881255
6395110Illuminacontig_001778144ycfW_S 1018711431 EMBL GBK
ycfV_S 1143112132
ycfU_S 1212513333
mfd_S 1362917075
ycfS_S 1723918198
ycfQ_S 1883419469
KP1_2092_S 2770128057
ptsG2_S 2831929752
ycfH_S 3004930843
holB_S 3085431858
tmk_S 3185532496
yceG_S 3248633508
pabC_S 3351034319
fabF_S 3444535686
fabG_S 3622336957
fabD_S 3697037899
fabH_S 3791538868
plsX_S 3892340020
rpmF (50S ribosomal protein L32) 4022440397
KP1_2077_S 4041440935
yceF_S 4107741661
mdoC_S 6704968209
KP1_2048_S 6824468837
KP1_2047_S 6890469449
ycdZ_S 6958470066
ycdY_S 7017070724
KP1_2044_S 7074771484
6395121 Illumina contig_0018 60890
6395147 Illumina contig_0019 60368
6395123Illuminacontig_002040200KP1_4987_S 81148344 EMBL GBK
prmA_S 83149195
KP1_4984_S 1064810890
accC_S 1100112350
accB_S 1236112828
KP1_4980_S 1285113303
KP1_4978_S 1413515151
KP1_4977_S 1536515556
6395130Illuminacontig_002137498ybhA_S 1102811846 EMBL GBK
ybhE_S 1207513070
KP1_1726_S 1317813444
KP1_1727_S 1349613801
KP1_1728_S 1392714172
KP1_1729_S 1450315714
KP1_1730_S 1586916603
KP1_1731_S 1664117195
KP1_1732_S 1727817646
KP1_1734_S 1875119674
6395107Illuminacontig_002234539zraP_S 63456782 EMBL GBK
KP1_0242_S 67867487
KP1_0241_S 74947766
KP1_0239_S 79538543
nfi_S 85869257
hemE_S 927010334
nudC_S 1037511148
rsd_S 1124211739
rplL (50S ribosomal protein L7/L12) 3045230817
rplJ (50S ribosomal protein L10) 3088431381
rplA (50S ribosomal protein L1) 3179532499
rplK (50S ribosomal protein L11) 3250332931
6395115Illuminacontig_002326292yrdA_S 299853 EMBL GBK
KP1_4999_S 8291086
aroE_S 10831901
yrdC_S 19052522
yrdD_S 24823024
KP1_5003_S 30513524
smf_S 34964620
def_S 47495258
KP1_5012_S 1021210580
rplQ (50S ribosomal protein L17) 1068911075
KP1_5015_S 1111612105
rpsD (30S ribosomal protein S4) 1213112751
rpsK (30S ribosomal protein S11) 1278513174
rpsM (30S ribosomal protein S13) 1319113547
rpmJ (50S ribosomal protein L36) 1369413810
secY_S 1384415175
rplO (50S ribosomal protein L15) 1518315617
rpmD (50S ribosomal protein L30) 1562115800
rpsE (30S ribosomal protein S5) 1580416307
rplR (50S ribosomal protein L18) 1632216675
rplF (50S ribosomal protein L6) 1668517218
rpsH (30S ribosomal protein S8) 1723117623
rpsN (30S ribosomal protein S14) 1765717962
rplE (50S ribosomal protein L5) 1797718516
rplX (50S ribosomal protein L24) 1853118845
rplN (50S ribosomal protein L14) 1885619227
rpsQ (30S ribosomal protein S17) 1939319647
rpmC (50S ribosomal protein L29) 1964719838
rplP (50S ribosomal protein L16) 1983820248
rpsC (30S ribosomal protein S3) 2026120959
rplV (50S ribosomal protein L22) 2097721309
rpsS (30S ribosomal protein S19) 2132421602
rplB (50S ribosomal protein L2) 2161922440
rplW (50S ribosomal protein L23) 2245822760
rplD (50S ribosomal protein L4) 2275723362
rplC (50S ribosomal protein L3) 2337324002
rpsJ (30S ribosomal protein S10) 2403524346
6395150 Illumina contig_0024 21013
6395139 Illumina contig_0025 19356
6395149 Illumina contig_0029 13167
6395134 Illumina contig_0030 12136
6395113 Illumina contig_0026 6888
6395122 Illumina contig_0027 4404
6395108 Illumina contig_0031 4338
6395136Illuminacontig_00324005blaSHV (SHV beta-lactamase) 1721029 EMBL GBK
6395104 Illumina contig_0033 3735
6395128 Illumina contig_0034 3672
6395118 Illumina contig_0037 2603
6395126 Illumina contig_0038 1631
6395124 Illumina contig_0028 1614
6395151 Illumina contig_0039 1597
6395127 Illumina contig_0035 1454
6395141 Illumina contig_0036 1216
6395146 Illumina contig_0040 875
6395131 Illumina contig_0041 844
6395116 Illumina contig_0042 820
6395135 Illumina contig_0043 617
6395106 Illumina contig_0044 551
6395137 Illumina contig_0045 544
6395140 Illumina contig_0046 533
6395152 Illumina contig_0047 494
6395138 Illumina contig_0048 481
6395103 Illumina contig_0049 452
6395133 Illumina contig_0050 357