Sequence bin for INF114

Contig summary statistics

Contigs
36
Total length
5,644,354
Minimum length
318
Maximum length
1,182,038
Mean length
156,788
N50
379,662
L50
5
N90
102,617
L90
17
N95
98,612
L95
19

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6394594Illuminacontig_00011182038KP1_2532_S 7028470619 EMBL GBK
ydgB_S 7061671338
ydgI_S 7137572757
KP1_2535_S 7293573885
KP1_2536_S 7388274064
blaLEN (LEN beta-lactamase) 171769172626
KP1_2672_S 204382205326
KP1_2673_S 205472205954
yneJ_S 205908206786
yneI_S 207385208278
yneH_S 208360209286
KP1_2697_S 222293222964
KP1_2700_S 224567225595
KP1_2702_S 226164226475
KP1_2703_S 226653227408
gst_S 576713577318
pdxY_S 577361578221
tyrS_S 578282579556
pdxH_S 579681580337
KP1_3049_S 580395580718
anmK_S 580811581908
ydhM_S 589981590580
nemA_S 590634591731
gloA_S 591810592217
KP1_3065_S 593050593397
ydhO_S 593738594610
rplT (50S ribosomal protein L20) 805978806334
rpmI (50S ribosomal protein L35) 806385806582
KP1_3289_S 810090810848
pfkB_S 811203812135
KP1_3291_S 812228812512
chaC_S 866368867048
chaB_S 867185867415
chaA_S 867679868779
kdsA_S 868867869721
ychQ_S 870577870969
hemK_S 870969871817
prfA_S 871817872899
KP1_3440_S 969964970410
ycgM_S 970505971164
KP1_3442_S 971181971501
minC_S 971589972290
minD_S 972314973126
minE_S 973130973399
fadD_S 974674976359
yeaY_S 976565977146
yeaZ_S 977185977880
KP1_3451_S 980068980412
KP1_3486_S 10138691014252
holE_S 10143571014587
exoX_S 10146661015325
ptrB_S 10153291017389
yebG_S 10183141018661
purT_S 10187971019975
KP1_3501_S 10334271034746
znuC_S 10357841036536
znuB_S 10365361037321
ruvB_S 10373851038395
ruvA_S 10384041039015
ftnA_S 10656191066116
KP1_3536_S 10661531066392
tyrP_S 10665831067794
KP1_3538_S 10678201068488
dapA4_S 10685731069454
KP1_3551_S 10813141081745
rcsA_S 10821201082743
KP1_3553_S 10827761082967
KP1_3554_S 10830981083322
yedI_S 10854171086328
6394589Illuminacontig_0002506745ung_S 91639852 EMBL GBK
yfiD_S 1016410547
srmB_S 1059311924
yfiC_S 1203412792
nadB_S 1277714396
yfhK_S 3303134470
yfhG_S 3447935186
yfhA_S 3517336510
KP1_4132_S 3657636914
hmpA_S 3698938179
glyA_S 3850539758
suhB_S 4566446467
yfhQ_S 4658847322
iscR_S 4757548066
iscS_S 4824649460
KP1_4113_S 4948749873
iscA_S 4989150214
hscB_S 5028950804
hemF_S 147927148826
amiA_S 148826149698
KP1_4027_S 149748149888
ypeA_S 149895150335
KP1_4024_S 150322150771
KP1_4023_S 150833151408
KP1_4022_S 151503152402
aroC_S 205835206923
mepA_S 206926207750
yfcA_S 207750208559
yfcM_S 208559209107
KP1_3965_S 209139209420
flk_S 219035220015
KP1_3960_S 220014220142
pdxB_S 220126221262
KP1_3958_S 221326222339
truA_S 222339223151
dedA_S 223178223837
accD_S 223961224944
folX_S 235952236314
yfcG_S 236380237009
nuoA_S 251049251495
nuoB_S 251511252185
nuoC_S 252273254081
nuoE_S 254084254584
nuoF_S 254581255918
yejM_S 322928324688
KP1_3855_S 324707324934
yejK_S 325121326128
KP1_3853_S 326148326909
KP1_3852_S 326952327587
rsuA_S 332269332988
bcr_S 332985334181
KP1_3844_S 334512334856
yejE_S 336451337476
folE_S 365835366503
galS_S 367832368854
mglB_S 369151370149
mglA_S 370268371788
wzi (Wzi outer membrane protein of cps cluster) 459419459865
6394595Illuminacontig_0005442240dkgB_S 3921195 EMBL GBK
yafC_S 12412146
KP1_1068_S 35344340
yafE_S 44285198
yafP_S 2745427906
pepD_S 2794929406
gpt_S 2966430122
frsA_S 3022831472
crl_S 3153031928
KP1_1206_S 150154151056
KP1_1207_S 151325151966
KP1_1209_S 152156152701
KP1_1211_S 154653155519
KP1_1227_S 166283166648
KP1_1228_S 166673167368
tsx_S 167411168295
yajI_S 168596169135
nrdR_S 169283169732
thiJ_S 179709180308
apbA_S 180265181176
KP1_1246_S 181301181885
yajR_S 181928183292
KP1_1248_S 183452184630
KP1_1251_S 186335187153
tig_S 201604202902
clpP_S 203212203835
clpX_S 204086205360
lon_S 205436207898
hupB_S 208108208380
ppiD_S 208595210469
KP1_1275_S 210618210986
ptsG_S 239491239805
lacI_S 241484242554
rpmE2_S 242671242934
rpmE (50S ribosomal protein L31) 242671242934
rpmJ (50S ribosomal protein L36) 242934243074
adk_S 264428265072
hemH_S 265201266163
gsk_S 266227267531
ybaL_S 267567269243
fsr_S 269469270689
6394591Illuminacontig_0006394952yicE_S 2567927079 EMBL GBK
gltS_S 2772728557
glpK_S 2867230183
glpF_S 3020531056
KP1_5367_S 3149931744
sbp_S 3189632885
rpmB (50S ribosomal protein L28) 6178862024
rpmG (50S ribosomal protein L33) 6204562212
KP1_5309_S 8087781833
KP1_5307_S 8183783108
yibO_S 8311884743
yibN_S 8490885339
grxC_S 8544485695
secB_S 8575686223
KP1_5262_S 136951137661
tkrA_S 137770138741
KP1_5260_S 138766140046
KP1_5259_S 140151141086
KP1_5258_S 141090141839
KP1_5213_S 198492199523
KP1_5210_S 201434202003
prlC_S 209801211843
KP1_5202_S 211794212603
yhiP_S 212749214221
uspA_S 214478214915
yhiO_S 215298215633
pitA_S 215693217189
asd_S 282477283631
glgB_S 283870286056
glgX_S 286149288029
glgC_S 288110289405
glgA_S 289405290838
aroK_S 331997332518
aroB_S 332574333668
dam_S 335103335930
rpe_S 335948336625
gph_S 336618337379
trpS_S 337372338376
cysG_S 338450339823
nirD_S 339976340302
yhfC_S 344400345587
ppiA_S 345865346434
KP1_5076_S 346541346708
KP1_5075_S 346698347300
pabA_S 347333347896
crp_S 351327351959
KP1_5070_S 352266352670
prkB_S 352726353595
KP1_5068_S 353632353850
yheT_S 353847354869
yheS_S 355071356975
rpsL (30S ribosomal protein S12) 363786364160
rpsG (30S ribosomal protein S7) 364257364727
rpsJ (30S ribosomal protein S10) 369967370278
rplC (50S ribosomal protein L3) 370311370940
rplD (50S ribosomal protein L4) 370951371556
rplW (50S ribosomal protein L23) 371553371855
rplB (50S ribosomal protein L2) 371873372694
rpsS (30S ribosomal protein S19) 372711372989
rplV (50S ribosomal protein L22) 373004373336
rpsC (30S ribosomal protein S3) 373354374052
rplP (50S ribosomal protein L16) 374065374475
rpmC (50S ribosomal protein L29) 374475374666
rpsQ (30S ribosomal protein S17) 374666374920
rplN (50S ribosomal protein L14) 375086375457
rplX (50S ribosomal protein L24) 375468375782
rplE (50S ribosomal protein L5) 375797376336
rpsN (30S ribosomal protein S14) 376351376656
rpsH (30S ribosomal protein S8) 376690377082
rplF (50S ribosomal protein L6) 377095377628
rplR (50S ribosomal protein L18) 377638377991
rpsE (30S ribosomal protein S5) 378006378509
rpmD (50S ribosomal protein L30) 378513378692
rplO (50S ribosomal protein L15) 378696379130
secY_S 379138380469
rpmJ (50S ribosomal protein L36) 380503380619
rpsM (30S ribosomal protein S13) 380766381122
rpsK (30S ribosomal protein S11) 381139381528
rpsD (30S ribosomal protein S4) 381562382182
KP1_5015_S 382208383197
rplQ (50S ribosomal protein L17) 383238383624
KP1_5012_S 383733384101
def_S 389055389564
smf_S 389693390817
KP1_5003_S 390789391262
yrdD_S 391289391831
yrdC_S 391791392408
aroE_S 392412393230
KP1_4999_S 393227393484
yrdA_S 393460394014
6394579Illuminacontig_0007379662ispC_S 2895330155 EMBL GBK
frr_S 3038330940
pyrH_S 3109131816
tsf_S 3196432815
rpsB (30S ribosomal protein S2) 3293533660
map_S 3398434778
sfsA_S 7808078796
dksA_S 7894179414
yadB_S 7947480355
folK_S 8180982288
KP1_0965_S 8457585822
yadI_S 8588786327
yadH_S 8645087220
yadG_S 8721788143
hpt_S 8904889596
KP1_0946_S 104129104944
KP1_0945_S 104989105273
lpdA_S 105438106865
KP1_0936_S 114756116162
KP1_0935_S 116162117112
ampE_S 117232118086
ampD_S 118083118646
nadC_S 118780119673
ppdD_S 119855120286
guaC_S 122914123957
KP1_0927_S 124014124145
coaE_S 124301124921
KP1_0925_S 124921125664
yacG_S 125674125868
mutT_S 125921126313
ftsI_S 144285146051
ftsL_S 146067146432
mraW_S 146429147370
KP1_0903_S 147373147867
fruR_S 148472149476
ilvH_S 149657150178
ilvI_S 150151151875
gudP_S 165197166507
setA_S 166552167736
KP1_0882_S 168008168166
yabN_S 168248169903
tbpA_S 170232171176
yabI_S 173434174201
araC_S 174330175175
araB_S 175512177221
araA_S 177232178734
araD_S 178872179567
pdxA_S 195356196345
ksgA_S 196342197163
apaG_S 197166197543
apaH_S 197548198396
folA_S 198689199168
kefC_S 199343201208
yabF_S 201201201734
rpsT (30S ribosomal protein S20) 242791243054
thrB_S 258486259415
thrA_S 259417261921
lasT_S 262241262927
arcA_S 263560264276
creC_S 265758267182
creB_S 267182267871
yjjK_S 273280274947
nadR_S 275123276355
sms_S 276377277759
serB_S 277769278761
smp_S 278845279492
lplA_S 279492280508
KP1_0801_S 280588281307
deoB_S 281410282633
deoA_S 282686284008
prfC_S 288458290047
yjjG_S 290138290815
rimI_S 290830291276
holD_S 291245291658
mtr_S 293302293655
ycdT_S 293806294852
fhuF_S 294964295752
KP1_0776_S 299564300445
KP1_0775_S 300462301646
yjjP_S 301928302704
yjjB_S 302680303168
dnaT_S 303272303811
dnaC_S 303814304551
yjjA_S 304617305111
6394583Illuminacontig_0008358025celC_S 139223139570 EMBL GBK
celA_S 141130141450
osmE_S 141729142067
nadE_S 142350143177
spy_S 144228144710
KP1_2225_S 182777183121
KP1_2224_S 183218183496
yeaA_S 183540183953
KP1_2220_S 185361186245
6394576Illuminacontig_0003352705epd_S 4851513 EMBL GBK
pgk_S 15532716
fbaA_S 28143893
yggB_S 40854942
yggA_S 50945729
yggE_S 58196586
KP1_4633_S 1116511494
KP1_4632_S 1165512239
pepP_S 1226313579
KP1_4629_S 1476515967
KP1_4618_S 2721427942
KP1_4617_S 2799328304
yqfA_S 2846829127
KP1_4613_S 3051230778
KP1_4612_S 3075931169
fldB_S 3117631697
xerD_S 3179832694
dsbC_S 3271733430
KP1_4524_S 111745113145
KP1_4523_S 113153114580
KP1_4521_S 114648115421
KP1_4520_S 115418115897
galR_S 115858116874
ygdP_S 124702125232
ptsP_S 125245127491
lgt_S 127731128606
thyA_S 128613129407
ppdA_S 129678130145
argA_S 143792145123
amiC_S 145315146604
cobD_S 146622147698
pduX_S 147702148604
pduW_S 148660149874
KP1_4457_S 174552175277
KP1_4456_S 175274176059
KP1_4455_S 176070176864
KP1_4453_S 177571178308
KP1_4452_S 178310178591
cbiQ_S 178578179255
6394607Illuminacontig_0009339858KP1_4652_S 993310433 EMBL GBK
endA_S 1047111235
KP1_4654_S 1125212058
gshB_S 1207913029
KP1_4657_S 1320313766
yqgF_S 1376614182
KP1_4731_S 7660477275
ygiC_S 7728178441
ygiD_S 7848279273
ygiE_S 7946080230
ribB_S 8029280945
uppP_S 8984590666
folB_S 9086491250
KP1_4750_S 9135591972
ureD_S 9237093194
ureA_S 9320493506
ureB_S 9351693836
rpsU (30S ribosomal protein S21) 100376100591
KP1_4812_S 179111179611
ygjR_S 179685180674
ygjT_S 180946181917
ygjU_S 182149183396
KP1_4816_S 183412183966
KP1_4822_S 190709191092
KP1_4823_S 191242191610
KP1_4824_S 191656191961
KP1_4825_S 191964192362
KP1_4826_S 192359192655
KP1_4861_S 219631220017
yraO_S 220007220633
yraP_S 220643221218
KP1_4865_S 221328222368
yhbO_S 223112223777
KP1_4868_S 223739224182
KP1_4870_S 224509225012
KP1_4871_S 225006225530
yhbU_S 225751226746
yhbV_S 226737227630
yhbW_S 227774228781
rpsO (30S ribosomal protein S15) 235694235963
rpmA (50S ribosomal protein L27) 257083257340
rplU (50S ribosomal protein L21) 257361257672
yrbI_S 266437267003
KP1_4921_S 267000267575
yhbN_S 267544268089
yhbG_S 268096268821
rpoN_S 268869270302
yhbH_S 270325270612
ptsN_S 270683271171
KP1_4927_S 271217272071
ptsO_S 272068272340
rpsI (30S ribosomal protein S9) 290113290505
rplM (50S ribosomal protein L13) 290521290949
KP1_4977_S 324292324483
KP1_4978_S 324697325713
KP1_4980_S 326545326997
accB_S 327020327487
accC_S 327498328847
KP1_4984_S 328958329200
prmA_S 330653331534
KP1_4987_S 331504331734
6394584Illuminacontig_0012202129pyrD_S 7919480231 EMBL GBK
ssuE_S 8045381028
ssuA_S 8102181983
ssuD_S 8198083125
ssuC_S 8313683927
KP1_1916_S 107288108517
msbA_S 109549111297
ihfB_S 113804114091
rpsA (30S ribosomal protein S1) 114243115916
ybjE_S 156563157462
hcp_S 157606159258
hcr_S 159269160237
KP1_1855_S 175312176028
KP1_1853_S 177276177764
potI_S 177822178709
potH_S 178664179617
6394609Illuminacontig_0013191927tolR_S 54085836 EMBL GBK
tolQ_S 58406532
KP1_1697_S 65296933
cydB_S 76278766
cydA_S 878210353
KP1_1663_S 4150542197
ybfF_S 4223743010
KP1_1661_S 4307543437
fldA_S 4352044119
fur_S 4441144863
KP1_1657_S 4994750279
KP1_1656_S 5032750827
glnS_S 5216753834
nagE_S 5401355968
nagB_S 5628457084
nagA_S 5719858346
nagC_S 5835559575
nagD_S 5970460456
rlpB_S 8147482064
holA_S 8207383095
nadD_S 8308583738
KP1_1624_S 8466384980
KP1_1623_S 8498485451
ybeF_S 9221093214
lipA_S 9339594360
tatE_S 9456194767
ybeM_S 9501295800
KP1_1612_S 9589096273
cspE_S 9634096633
pagP_S 9674497262
dcuC_S 9760198974
KP1_1607_S 9906799864
ykfE_S 178717179244
betT_S 179291181324
betB_S 182054183526
betA_S 183495185204
6394592 Illumina contig_0016 136839
6394593Illuminacontig_0017122467ybiR_S 2780328915 EMBL GBK
mntR_S 2891229385
KP1_1803_S 2957129696
ybiP_S 2995631545
ompX_S 3163632151
ybiF_S 3250333390
dps_S 3362834131
glnH_S 3456235308
KP1_1734_S 9797998902
KP1_1732_S 100007100375
KP1_1731_S 100458101012
KP1_1730_S 101050101784
KP1_1729_S 101939103150
KP1_1728_S 103481103726
KP1_1727_S 103852104157
KP1_1726_S 104209104475
ybhE_S 104583105578
ybhA_S 105807106625
6394601Illuminacontig_0010117694yjgB_S 6128362302 EMBL GBK
KP1_0569_S 6243363317
KP1_0568_S 6330764194
KP1_0567_S 6420565029
KP1_0517_S 109166109906
KP1_0516_S 109891110994
KP1_0515_S 109903111021
KP1_0514_S 111005112138
KP1_0513_S 112252112896
6394587Illuminacontig_0011115359rplI (50S ribosomal protein L9) 4241042859 EMBL GBK
rpsR (30S ribosomal protein S18) 4290143128
priB_S 4313343300
rpsF (30S ribosomal protein S6) 4345343848
KP1_0467_S 4419044465
KP1_0446_S 6124161438
KP1_0445_S 6161161952
hflC_S 6203563039
hflK_S 6304264304
hflX_S 6437065650
hfq_S 6572666034
frdD_S 8719987588
blc_S 8770288235
sugE_S 8823288549
ecnB_S 8869388839
ecnA_S 8899889129
efp_S 8920389769
6394581Illuminacontig_0018112983yieP_S 5071208 EMBL GBK
rbsK_S 36114540
rbsB_S 46445534
rbsC_S 55626527
gidB_S 1821718840
atpI_S 1938519837
atpB_S 1984520660
atpE_S 2070920948
atpF_S 2100521469
rpmH (50S ribosomal protein L34) 4971949859
6394603 Illumina contig_0019 110615
6394580Illuminacontig_0004102617KP1_4281_S 1460916285 EMBL GBK
emrA_S 1797619148
emrR_S 1927419774
ygaH_S 1989520230
smpB_S 7588676368
KP1_4197_S 7647976955
KP1_4196_S 7694577235
smpA_S 7730577646
ppnK_S 7954280420
grpE_S 8054581135
rpsP (30S ribosomal protein S16) 8518885436
rplS (50S ribosomal protein L19) 8684287189
6394602Illuminacontig_001599960ssb_S 4255843085 EMBL GBK
uvrA_S 4333746162
KP1_0300_S 4616346519
KP1_0299_S 4652346939
iclR_S 9199792923
aceK_S 9297494758
aceA_S 9486196180
metA_S 9810799036
yjaB_S 9919399654
6394578Illuminacontig_002098612polA_S 48057597 EMBL GBK
engB_S 79458577
KP1_0026_S 91629668
hemN_S 985711230
glnG_S 1149112900
glnL_S 1290913958
glnA_S 1414715556
bipA_S 1593517758
rhaD_S 4745648286
rhaA_S 4846349728
rhaB_S 4971951185
rhaS_S 5149652332
rhaR_S 5240653251
rhaT_S 5328454318
sodA_S 5460255228
KP1_0077_S 5530155975
cpxA_S 5603957412
cpxR_S 5740958107
cpxP_S 5825758760
rpmE (50S ribosomal protein L31) 6925969471
yijC_S 9310493736
KP1_0118_S 9375294111
trmA_S 9416595265
KP1_0120_S 9546795589
btuB_S 9563297470
KP1_0122_S 9741598266
6394604Illuminacontig_002192896ilvM_S 53805637 EMBL GBK
ilvE_S 56576586
ilvD_S 66478497
ilvA_S 855710044
ilvY_S 1004111015
cyaY_S 4627046590
KP1_0167_S 4672946932
dapF_S 4696547792
KP1_0169_S 4778948496
xerC_S 4849349395
yigB_S 4939550111
rhtB_S 5979860418
pldB_S 6052861520
KP1_0183_S 6156562365
yigM_S 6245463353
metR_S 6324164194
udp_S 7424975010
yigN_S 7514676594
ubiE_S 7666577420
KP1_0193_S 7743478039
ubiB_S 7803679676
tatB_S 8006180597
tatC_S 8060081379
tatD_S 8142482215
rfaH_S 8221282700
fre_S 8440485105
fadA_S 8521286375
6394586Illuminacontig_002272877KP1_2044_S 13852122 EMBL GBK
ycdY_S 21452699
ycdZ_S 28033285
KP1_2047_S 34203965
KP1_2048_S 40324625
mdoC_S 46605820
yceF_S 3121731801
KP1_2077_S 3194332464
rpmF (50S ribosomal protein L32) 3248132654
plsX_S 3285833955
fabH_S 3401034963
fabD_S 3497935908
fabG_S 3592136655
fabF_S 3719238433
pabC_S 3855939368
yceG_S 3937040392
tmk_S 4038241023
holB_S 4102042024
ycfH_S 4203542829
ptsG2_S 4312644559
KP1_2092_S 4482145177
ycfQ_S 5340954044
ycfS_S 5468055639
mfd_S 5580359249
ycfU_S 5954560753
ycfV_S 6074661447
ycfW_S 6144762691
6394597Illuminacontig_001442606hmsS_S 1125311702 EMBL GBK
KP1_0379_S 1174912582
cbpA_S 1358814505
KP1_0375_S 1449014810
6394575Illuminacontig_002334500zraP_S 63176754 EMBL GBK
KP1_0242_S 67587459
KP1_0241_S 74667738
KP1_0239_S 79258515
nfi_S 85589229
hemE_S 924210306
nudC_S 1034711120
rsd_S 1121411711
rplL (50S ribosomal protein L7/L12) 3042430789
rplJ (50S ribosomal protein L10) 3085631353
rplA (50S ribosomal protein L1) 3176732471
rplK (50S ribosomal protein L11) 3247532903
6394600 Illumina contig_0024 18764
6394598 Illumina contig_0025 4376
6394577 Illumina contig_0028 2229
6394582 Illumina contig_0027 1681
6394599 Illumina contig_0029 1562
6394610 Illumina contig_0030 1366
6394590 Illumina contig_0026 1126
6394585 Illumina contig_0031 919
6394608 Illumina contig_0032 534
6394588 Illumina contig_0033 455
6394605 Illumina contig_0034 384
6394606 Illumina contig_0035 334
6394596 Illumina contig_0036 318