Sequence bin for ERR971955

Contig summary statistics

Contigs
56
Total length
5,204,832
Minimum length
303
Maximum length
1,485,378
Mean length
92,944
N50
264,914
L50
5
N90
90,085
L90
17
N95
72,891
L95
21

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6379671Illuminacontig_00021485378aroC_S 3072531813 EMBL GBK
mepA_S 3181632640
yfcA_S 3264033449
yfcM_S 3344933997
KP1_3965_S 3402934310
flk_S 3921140188
KP1_3960_S 4018740315
pdxB_S 4029941435
KP1_3958_S 4149942512
truA_S 4251243324
dedA_S 4335144010
accD_S 4413345116
folX_S 5611456476
yfcG_S 5654257171
yfcF_S 5735257990
yfcD_S 5866259213
nuoA_S 7120571651
nuoB_S 7166772341
nuoC_S 7242874236
nuoE_S 7423974739
nuoF_S 7473676073
yejM_S 137509139269
KP1_3855_S 139288139515
yejK_S 139702140709
KP1_3853_S 140729141490
KP1_3852_S 141534142169
rsuA_S 146851147570
bcr_S 147567148763
KP1_3844_S 149095149439
yejE_S 151034152059
folE_S 178963179631
galS_S 180960181982
mglB_S 182279183277
mglA_S 183396184916
wzi (Wzi outer membrane protein of cps cluster) 275295275741
yedI_S 368335369246
KP1_3554_S 371341371565
KP1_3553_S 371696371887
rcsA_S 371920372543
KP1_3551_S 372919373350
dapA4_S 383948384829
KP1_3538_S 384928385596
tyrP_S 385621386832
KP1_3536_S 387024387263
ftnA_S 387299387796
ruvA_S 414407415018
ruvB_S 415027416037
znuB_S 416101416886
znuC_S 416886417638
znuA_S 417591418661
KP1_3501_S 418677419996
msbB_S 420114421088
purT_S 428169429347
yebG_S 429492429839
KP1_3490_S 429979430638
ptrB_S 430759432819
exoX_S 432823433482
holE_S 433561433791
KP1_3486_S 433895434278
KP1_3451_S 467710468054
yeaZ_S 470242470937
yeaY_S 470976471557
fadD_S 471763473448
minE_S 474723474992
minD_S 474996475808
minC_S 475832476530
KP1_3442_S 476618476938
ycgM_S 476955477614
KP1_3440_S 477709478155
prfA_S 556301557383
hemK_S 557383558231
ychQ_S 558231558623
kdsA_S 559479560333
chaA_S 560420561520
chaB_S 561784562014
chaC_S 562151562831
tonB 612461612874
KP1_3291_S 614076614360
pfkB_S 614455615387
KP1_3289_S 615744616502
rpmI (50S ribosomal protein L35) 620007620204
rplT (50S ribosomal protein L20) 620255620611
ydhO_S 811827812699
KP1_3065_S 813040813387
gloA_S 814220814627
nemA_S 814706815803
ydhM_S 815857816456
anmK_S 824527825624
KP1_3049_S 825717826040
pdxH_S 826098826754
tyrS_S 826879828153
pdxY_S 828215829075
gst_S 829118829723
KP1_2703_S 11628361163591
KP1_2702_S 11637681164079
KP1_2700_S 11646471165675
KP1_2697_S 11672781167949
yneH_S 11804121181338
yneI_S 11814191182312
yneJ_S 11829091183787
KP1_2673_S 11837411184223
KP1_2672_S 11843681185312
blaSHV (SHV beta-lactamase) 12185151219372
KP1_2536_S 13021381302320
KP1_2535_S 13023171303267
ydgI_S 13034451304827
ydgB_S 13048641305586
KP1_2532_S 13055831305918
6379680Illuminacontig_0003479143rpsG (30S ribosomal protein S7) 24872957 EMBL GBK
rpsL (30S ribosomal protein S12) 30543428
yheS_S 1024212146
yheT_S 1235013372
KP1_5068_S 1336913587
prkB_S 1362414493
KP1_5070_S 1454814952
crp_S 1525915891
pabA_S 1932219885
KP1_5075_S 1991820520
KP1_5076_S 2051020677
ppiA_S 2078421353
yhfC_S 2163022817
nirD_S 2691427240
cysG_S 2739428767
trpS_S 2884029844
gph_S 2983730598
rpe_S 3059131268
dam_S 3128632113
aroB_S 3356334657
aroK_S 3471335234
glgA_S 7635377786
glgC_S 7778679081
glgX_S 7916281042
glgB_S 8113583321
asd_S 8355984713
pitA_S 142738144234
yhiO_S 144290144625
uspA_S 145008145445
yhiP_S 145702147174
prlC_S 148080150122
KP1_5210_S 157912158481
KP1_5213_S 160400161431
KP1_5258_S 215850216599
KP1_5259_S 216603217538
KP1_5260_S 217643218923
tkrA_S 218948219919
KP1_5262_S 220028220738
secB_S 262764263231
grxC_S 263292263543
yibN_S 263648264079
yibO_S 264244265869
KP1_5307_S 265879267150
KP1_5309_S 267154268101
rpmG (50S ribosomal protein L33) 286823286990
rpmB (50S ribosomal protein L28) 287011287247
sbp_S 317994318983
KP1_5367_S 319135319380
glpF_S 319823320674
glpK_S 320696322207
gltS_S 322322323152
yicE_S 323800325200
rpmH (50S ribosomal protein L34) 429310429450
atpF_S 457773458237
atpE_S 458294458533
atpB_S 458583459398
atpI_S 459406459858
gidB_S 460403461026
rbsC_S 472716473681
rbsB_S 473709474599
rbsK_S 474703475632
yieP_S 478035478736
6379693Illuminacontig_0007323140ybhA_S 1607216890 EMBL GBK
ybhE_S 1711918114
KP1_1726_S 1822518491
KP1_1727_S 1854318848
KP1_1728_S 1897619221
KP1_1729_S 1955120762
KP1_1730_S 2091821652
KP1_1731_S 2169422248
KP1_1732_S 2233022695
KP1_1734_S 2380124724
glnH_S 8728688032
dps_S 8844188944
ybiF_S 8918290069
ompX_S 9042190933
ybiP_S 9102492613
KP1_1803_S 9287392998
mntR_S 9318493657
ybiR_S 9365494766
potH_S 144575145528
potI_S 145483146370
KP1_1853_S 146428146916
KP1_1855_S 148164148880
hcr_S 163947164915
hcp_S 164926166578
ybjE_S 166722167621
rpsA (30S ribosomal protein S1) 208203209876
ihfB_S 210028210315
msbA_S 212822214570
KP1_1916_S 215602216831
ssuC_S 246187246978
ssuD_S 246989248134
ssuA_S 248131249093
ssuE_S 249086249661
pyrD_S 249884250921
6379660Illuminacontig_0010295407KP1_4652_S 90269526 EMBL GBK
endA_S 956410328
KP1_4654_S 1034511151
gshB_S 1117212122
KP1_4657_S 1229712860
yqgF_S 1286013276
KP1_4731_S 7247173142
ygiC_S 7314874308
ygiD_S 7435375144
ygiE_S 7533176101
ribB_S 7616376816
uppP_S 8571686537
folB_S 8673687122
KP1_4750_S 8722787844
ureD_S 8824289066
ureA_S 8907689378
ureB_S 8938889708
rpsU (30S ribosomal protein S21) 9624996464
KP1_4812_S 142297142797
ygjR_S 142871143860
ygjT_S 144132145103
ygjU_S 145370146617
KP1_4816_S 146633147187
KP1_4822_S 153927154310
KP1_4823_S 154460154828
KP1_4824_S 154874155179
KP1_4825_S 155182155580
KP1_4826_S 155577155873
KP1_4861_S 184077184463
yraO_S 184453185079
yraP_S 185089185664
KP1_4865_S 185786186826
yhbO_S 187549188214
KP1_4868_S 188176188619
KP1_4870_S 188946189449
KP1_4871_S 189443189967
yhbU_S 190189191184
yhbV_S 191175192068
yhbW_S 192212193219
rpsO (30S ribosomal protein S15) 200133200402
infB 203043203360
rpmA (50S ribosomal protein L27) 221506221763
rplU (50S ribosomal protein L21) 221784222095
yrbI_S 230862231428
KP1_4921_S 231425232000
yhbN_S 231969232514
yhbG_S 232521233246
rpoN_S 233294234727
yhbH_S 234750235037
ptsN_S 235108235596
KP1_4927_S 235642236496
ptsO_S 236493236765
rpsI (30S ribosomal protein S9) 254548254940
rplM (50S ribosomal protein L13) 254956255384
mdh 260448260924
KP1_4977_S 279986280177
KP1_4978_S 280392281408
KP1_4979_S 281408282016
KP1_4980_S 282240282692
accB_S 282715283182
accC_S 283193284542
KP1_4984_S 284653284895
prmA_S 286348287229
KP1_4987_S 287199287429
6379675Illuminacontig_0011264914tolR_S 49535381 EMBL GBK
tolQ_S 53856077
KP1_1697_S 60746478
KP1_1696_S 66286918
cydB_S 70508189
cydA_S 82059776
KP1_1663_S 4255043242
ybfF_S 4328244055
KP1_1661_S 4412044482
fldA_S 4456545164
fur_S 4545645908
KP1_1657_S 4652546857
KP1_1656_S 4690547405
metH_S 4838248690
glnS_S 4874450411
nagE_S 5059052545
nagB_S 5286053660
nagA_S 5377454922
nagC_S 5493156151
nagD_S 5626857020
rlpB_S 7803578625
holA_S 7863479656
nadD_S 7964680299
KP1_1624_S 8122481541
KP1_1623_S 8154582012
ybeF_S 8876289766
lipA_S 8994790912
tatE_S 9110391309
ybeM_S 9155292340
KP1_1612_S 9243092813
cspE_S 9288193174
pagP_S 9328593803
dcuC_S 9414295515
KP1_1607_S 9560896405
ykfE_S 184047184574
betT_S 184620186653
betB_S 187383188855
betA_S 188824190533
6379686Illuminacontig_0012259281KP1_1206_S 6381464716 EMBL GBK
KP1_1207_S 6498365624
KP1_1209_S 6581166356
KP1_1211_S 6830869174
KP1_1227_S 7993680301
KP1_1228_S 8032581020
tsx_S 8107581959
yajI_S 8225882797
nrdR_S 8294583394
thiJ_S 9336593964
apbA_S 9392194832
KP1_1246_S 9493195515
yajR_S 9556096924
KP1_1248_S 9708498262
KP1_1251_S 99969100787
tig_S 115240116538
clpP_S 116848117471
clpX_S 117722118996
lon_S 119072121534
hupB_S 121744122016
ppiD_S 122231124105
KP1_1275_S 124254124622
ptsG_S 153116153430
lacI_S 155109156179
rpmE (50S ribosomal protein L31) 156295156558
rpmE2_S 156295156558
rpmJ (50S ribosomal protein L36) 156558156698
adk_S 178054178698
hemH_S 178827179789
gsk_S 179853181157
ybaL_S 181193182869
fsr_S 183095184315
6379661Illuminacontig_0015216415celC_S 105414105761 EMBL GBK
celA_S 107321107641
osmE_S 107920108258
nadE_S 108541109368
spy_S 110420110902
KP1_2225_S 148877149221
KP1_2224_S 149316149594
yeaA_S 149638150051
gapA 150633151082
KP1_2220_S 151460152344
yeaE_S 152401153285
6379657Illuminacontig_0005185575KP1_0946_S 83729187 EMBL GBK
KP1_0945_S 92339517
lpdA_S 968211109
KP1_0936_S 1900420398
KP1_0935_S 2039821348
ampE_S 2158422438
ampD_S 2243522998
nadC_S 2313224025
ppdD_S 2420724638
guaC_S 2726628309
KP1_0927_S 2836628497
coaE_S 2865329273
KP1_0925_S 2927330016
yacG_S 3002630220
mutT_S 3027330665
ftsI_S 4863650402
ftsL_S 5041850783
mraW_S 5078051721
KP1_0903_S 5172452218
fruR_S 5282353827
ilvH_S 5400854529
ilvI_S 5450256226
gudP_S 6954770857
setA_S 7089172075
KP1_0882_S 7234372501
yabN_S 7258374238
tbpA_S 7456775511
yabI_S 7776978536
araC_S 7866579510
araB_S 7984881557
araA_S 8156883070
araD_S 8320883903
pdxA_S 99797100786
ksgA_S 100783101604
apaG_S 101607101984
apaH_S 101989102837
folA_S 103089103568
kefC_S 103742105607
yabF_S 105600106133
rpsT (30S ribosomal protein S20) 133986134249
thrB_S 149689150618
thrA_S 150620153124
lasT_S 153444154130
arcA_S 154763155479
creC_S 156961158385
creB_S 158385159074
yjjK_S 164483166150
nadR_S 166244167476
sms_S 167498168880
serB_S 168890169882
smp_S 169966170613
lplA_S 170613171629
KP1_0801_S 171710172429
deoB_S 172532173755
deoA_S 173808175130
prfC_S 180997182586
yjjG_S 182677183354
rimI_S 183369183815
holD_S 183784184197
6379640Illuminacontig_0009184054frdD_S 1321513604 EMBL GBK
blc_S 1371814251
sugE_S 1424814565
ecnB_S 1470914855
ecnA_S 1501515146
efp_S 1522015786
hmsS_S 5025150700
KP1_0379_S 5074651579
KP1_0378_S 5174252440
cbpA_S 5258653503
KP1_0375_S 5348853808
ssb_S 124171124695
uvrA_S 124947127772
KP1_0300_S 127773128129
KP1_0299_S 128133128549
pgi 157466157897
iclR_S 175924176850
aceK_S 176901178685
aceA_S 178788180107
metA_S 182034182963
yjaB_S 183120183581
6379678Illuminacontig_0016177314cbiQ_S 41634840 EMBL GBK
KP1_4452_S 48275108
KP1_4453_S 51105847
KP1_4455_S 65547348
KP1_4456_S 73598144
KP1_4457_S 81418866
pduW_S 3353734751
pduX_S 3480735709
cobD_S 3571336789
amiC_S 3680738096
argA_S 3828839619
ppdA_S 5326353730
thyA_S 5400054794
lgt_S 5480155676
ptsP_S 5592258168
ygdP_S 5818158711
galR_S 6653967555
KP1_4520_S 6751667995
KP1_4521_S 6799268765
KP1_4523_S 6883370260
KP1_4524_S 7026871668
dsbC_S 144273144986
xerD_S 145009145905
fldB_S 146006146527
KP1_4612_S 146534146944
KP1_4613_S 146925147191
yqfA_S 148571149230
KP1_4617_S 149394149705
KP1_4618_S 149755150483
KP1_4629_S 161622162824
pepP_S 164010165326
KP1_4632_S 165350165934
KP1_4633_S 166095166424
yggE_S 170704171471
yggA_S 171561172196
yggB_S 172348173205
fbaA_S 173395174474
pgk_S 174572175735
epd_S 175775176803
6379676Illuminacontig_0017172407ung_S 88009489 EMBL GBK
yfiD_S 980210185
srmB_S 1023111562
yfiC_S 1167312431
nadB_S 1241614035
yfhK_S 3267334112
yfhG_S 3412134828
yfhA_S 3481536152
KP1_4132_S 3621836556
hmpA_S 3663137821
glyA_S 3814739400
suhB_S 5208552888
yfhQ_S 5300953743
iscR_S 5397854469
iscS_S 5464855862
KP1_4113_S 5588956275
iscA_S 5629356616
hscB_S 5669157206
hemF_S 148809149708
amiA_S 149708150580
KP1_4027_S 150630150770
ypeA_S 150777151217
KP1_4024_S 151204151653
KP1_4023_S 151715152290
KP1_4022_S 152385153284
6379645 Illumina contig_0013 152364
6379685Illuminacontig_0008120172KP1_0517_S 4336544105 EMBL GBK
KP1_0516_S 4409045193
KP1_0515_S 4410245220
KP1_0514_S 4520446337
KP1_0513_S 4644347087
rplI (50S ribosomal protein L9) 8881889267
rpsR (30S ribosomal protein S18) 8930989536
priB_S 8954189708
rpsF (30S ribosomal protein S6) 8986190256
KP1_0467_S 9059790872
KP1_0446_S 107636107833
KP1_0445_S 108005108346
hflC_S 108429109433
hflK_S 109436110698
hflX_S 110764112044
hfq_S 112120112428
6379688Illuminacontig_000496000ispC_S 2932330525 EMBL GBK
frr_S 3075431311
pyrH_S 3146232187
tsf_S 3233833189
rpsB (30S ribosomal protein S2) 3330934034
map_S 3435735151
sfsA_S 7833779053
dksA_S 7919879671
yadB_S 7973180612
folK_S 8206682545
KP1_0965_S 8483286079
yadI_S 8614486584
yadH_S 8670787477
yadG_S 8747488400
hpt_S 8930789855
6379689Illuminacontig_001893361KP1_0122_S 3251176 EMBL GBK
btuB_S 11212959
KP1_0120_S 30023124
trmA_S 33264426
KP1_0118_S 44784837
yijC_S 48535485
rpmE (50S ribosomal protein L31) 2911829330
cpxP_S 3983540338
cpxR_S 4048841186
cpxA_S 4118342556
KP1_0077_S 4262443298
sodA_S 4337143997
rhaT_S 4428145315
rhaR_S 4534846193
rhaS_S 4626747103
rhaB_S 4741448880
rhaA_S 4887150136
rhaD_S 5028651116
bipA_S 7553477357
glnA_S 7773679145
glnL_S 7933480383
glnG_S 8039281801
hemN_S 8205883431
KP1_0026_S 8362084126
engB_S 8471085342
polA_S 8569088482
6379662Illuminacontig_001992874ilvM_S 53745631 EMBL GBK
ilvE_S 56486577
ilvD_S 66388488
ilvA_S 854810035
ilvY_S 1003211006
cyaY_S 4625946579
KP1_0167_S 4672646929
dapF_S 4696247789
KP1_0169_S 4778648493
xerC_S 4849049392
yigB_S 4939250108
rhtB_S 5980760427
pldB_S 6053761529
KP1_0183_S 6157462374
yigM_S 6246363362
metR_S 6325064203
udp_S 7426275023
yigN_S 7515976607
ubiE_S 7667877433
KP1_0193_S 7744778052
ubiB_S 7804979689
tatA_S 7977180070
tatB_S 8007480610
tatC_S 8061381392
tatD_S 8143782228
rfaH_S 8222582713
ubiD_S 8289284367
fre_S 8441785118
fadA_S 8522586388
6379655Illuminacontig_001490085KP1_4281_S 49656641 EMBL GBK
emrA_S 83329504
emrR_S 963010130
ygaH_S 1025110586
smpB_S 6345663938
KP1_4197_S 6404964525
KP1_4196_S 6451564805
smpA_S 6487265213
ppnK_S 6710967987
grpE_S 6811268702
rpsP (30S ribosomal protein S16) 7270772955
rplS (50S ribosomal protein L19) 7436174708
6379677Illuminacontig_000687696mtr_S 113466 EMBL GBK
ycdT_S 6161662
fhuF_S 17692557
KP1_0776_S 63767257
KP1_0775_S 72748458
yjjP_S 87389514
yjjB_S 94909978
dnaT_S 1008110620
dnaC_S 1062311360
yjjA_S 1142611917
6379692Illuminacontig_002080884yjgB_S 6576866787 EMBL GBK
KP1_0569_S 6691867802
KP1_0568_S 6779268679
KP1_0567_S 6869069514
6379643Illuminacontig_002174749dkgB_S 2361039 EMBL GBK
yafC_S 10851990
KP1_1068_S 33794185
yafE_S 42775047
yafP_S 2573026182
pepD_S 2622527682
gpt_S 2794028398
frsA_S 2850429748
crl_S 2980630204
phoE 7117271591
6379673Illuminacontig_002272891KP1_2044_S 14462183 EMBL GBK
ycdY_S 22062760
ycdZ_S 28643346
KP1_2047_S 34784023
KP1_2048_S 40904683
mdoC_S 47185878
yceF_S 3124331827
KP1_2077_S 3196932490
rpmF (50S ribosomal protein L32) 3250732680
plsX_S 3288433981
fabH_S 3403534988
fabD_S 3500435933
fabG_S 3594636680
fabF_S 3721738458
pabC_S 3858439393
yceG_S 3939540417
tmk_S 4040741048
holB_S 4104542049
ycfH_S 4206042854
ptsG2_S 4315144584
KP1_2092_S 4484645202
iutA 5100353204
ycfQ_S 5343654071
ycfS_S 5470755666
mfd_S 5583059276
ycfU_S 5957260780
ycfV_S 6077361474
ycfW_S 6147462718
6379683Illuminacontig_002334604rplK (50S ribosomal protein L11) 17422170 EMBL GBK
rplA (50S ribosomal protein L1) 21742878
rplJ (50S ribosomal protein L10) 32923789
rplL (50S ribosomal protein L7/L12) 38564221
rpoB 62026702
rsd_S 2293323430
nudC_S 2352424297
hemE_S 2433825402
nfi_S 2541526086
KP1_0239_S 2612926719
KP1_0241_S 2690627178
KP1_0242_S 2718527886
zraP_S 2789028327
6379663Illuminacontig_002426313yrdA_S 358912 EMBL GBK
KP1_4999_S 8881145
aroE_S 11421960
yrdC_S 19642581
yrdD_S 25413083
KP1_5003_S 31103583
smf_S 35554679
def_S 48085317
KP1_5012_S 1027110639
rplQ (50S ribosomal protein L17) 1074811134
KP1_5015_S 1117512164
rpsD (30S ribosomal protein S4) 1219012810
rpsK (30S ribosomal protein S11) 1284413233
rpsM (30S ribosomal protein S13) 1325013606
rpmJ (50S ribosomal protein L36) 1375313869
secY_S 1390315234
rplO (50S ribosomal protein L15) 1524215676
rpmD (50S ribosomal protein L30) 1568015859
rpsE (30S ribosomal protein S5) 1586316366
rplR (50S ribosomal protein L18) 1638116734
rplF (50S ribosomal protein L6) 1674417277
rpsH (30S ribosomal protein S8) 1729017682
rpsN (30S ribosomal protein S14) 1771618021
rplE (50S ribosomal protein L5) 1803618575
rplX (50S ribosomal protein L24) 1859018904
rplN (50S ribosomal protein L14) 1891519286
rpsQ (30S ribosomal protein S17) 1945219706
rpmC (50S ribosomal protein L29) 1970619897
rplP (50S ribosomal protein L16) 1989720307
rpsC (30S ribosomal protein S3) 2032021018
rplV (50S ribosomal protein L22) 2103621368
rpsS (30S ribosomal protein S19) 2138321661
rplB (50S ribosomal protein L2) 2167822499
rplW (50S ribosomal protein L23) 2251722819
rplD (50S ribosomal protein L4) 2281623421
rplC (50S ribosomal protein L3) 2343224061
rpsJ (30S ribosomal protein S10) 2409424405
6379652 Illumina contig_0025 24324
6379679 Illumina contig_0026 18841
6379690 Illumina contig_0027 16812
6379691 Illumina contig_0028 14638
6379664 Illumina contig_0029 13996
6379648 Illumina contig_0030 9325
6379674 Illumina contig_0031 7475
6379649 Illumina contig_0032 4930
6379670 Illumina contig_0033 4372
6379642 Illumina contig_0034 3679
6379641 Illumina contig_0035 2966
6379658 Illumina contig_0001 2795
6379653 Illumina contig_0036 2746
6379687 Illumina contig_0037 1553
6379639 Illumina contig_0038 1379
6379665 Illumina contig_0039 1199
6379659 Illumina contig_0040 933
6379644 Illumina contig_0041 875
6379684 Illumina contig_0042 827
6379646 Illumina contig_0043 725
6379672 Illumina contig_0044 716
6379650 Illumina contig_0045 534
6379654 Illumina contig_0046 486
6379666 Illumina contig_0047 428
6379651 Illumina contig_0048 422
6379668 Illumina contig_0049 420
6379647 Illumina contig_0050 391
6379681 Illumina contig_0051 379
6379667 Illumina contig_0052 364
6379669 Illumina contig_0053 363
6379682 Illumina contig_0054 308
6379656 Illumina contig_0055 307
6379694 Illumina contig_0056 303