Sequence bin for ERR971950

Contig summary statistics

Contigs
50
Total length
5,449,196
Minimum length
305
Maximum length
583,356
Mean length
108,984
N50
378,398
L50
6
N90
69,632
L90
19
N95
56,427
L95
23

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6379212Illuminacontig_0002583356KP1_2703_S 354476355231 EMBL GBK
KP1_2702_S 355409355720
KP1_2700_S 356289357317
KP1_2697_S 358920359591
yneH_S 372598373524
yneI_S 373606374499
yneJ_S 375098375976
KP1_2673_S 375930376412
KP1_2672_S 376558377502
KP1_2536_S 509912510094
KP1_2535_S 510091511041
ydgI_S 511219512601
ydgB_S 512638513360
KP1_2532_S 513357513692
6379226Illuminacontig_0003534695celC_S 255163255510 EMBL GBK
celA_S 257070257390
osmE_S 257669258007
nadE_S 258290259117
spy_S 260168260650
KP1_2225_S 289504289848
KP1_2224_S 289945290223
yeaA_S 290267290680
gapA 291261291710
KP1_2220_S 292088292972
yeaE_S 293028293912
ycfW_S 466974468218
ycfV_S 468218468919
ycfU_S 468912470120
mfd_S 470416473862
ycfS_S 474026474985
ycfQ_S 475621476256
KP1_2092_S 484488484844
ptsG2_S 485106486539
ycfH_S 486836487630
holB_S 487641488645
tmk_S 488642489283
yceG_S 489273490295
pabC_S 490297491106
fabF_S 491232492473
fabG_S 493010493744
fabD_S 493757494686
fabH_S 494702495655
plsX_S 495710496807
rpmF (50S ribosomal protein L32) 497011497184
KP1_2077_S 497201497722
yceF_S 497864498448
mdoC_S 523843525003
KP1_2048_S 525038525631
KP1_2047_S 525698526243
ycdZ_S 526378526860
ycdY_S 526964527518
KP1_2044_S 527541528278
6379219Illuminacontig_0004476230rplM (50S ribosomal protein L13) 63906818 EMBL GBK
rpsI (30S ribosomal protein S9) 68347226
ptsO_S 2499925271
KP1_4927_S 2526826122
ptsN_S 2616826656
yhbH_S 2672727014
rpoN_S 2703728470
yhbG_S 2851829243
yhbN_S 2925029795
KP1_4921_S 2976430339
yrbI_S 3033630902
rplU (50S ribosomal protein L21) 3966739978
rpmA (50S ribosomal protein L27) 3999940256
infB 5841758734
rpsO (30S ribosomal protein S15) 6137561644
yhbW_S 6855769564
yhbV_S 6970870601
yhbU_S 7059271587
KP1_4871_S 7180972333
KP1_4870_S 7232772830
KP1_4868_S 7315773600
yhbO_S 7356274227
KP1_4865_S 7495075990
yraP_S 7611276687
yraO_S 7669777323
KP1_4861_S 7731377699
KP1_4826_S 105104105400
KP1_4825_S 105397105795
KP1_4824_S 105798106103
KP1_4823_S 106149106517
KP1_4822_S 106667107050
KP1_4816_S 113794114348
ygjU_S 114364115611
ygjT_S 115843116814
ygjR_S 117086118075
KP1_4812_S 118149118649
rpsU (30S ribosomal protein S21) 197779197994
ureB_S 204534204854
ureA_S 204864205166
ureD_S 205176206000
KP1_4750_S 206398207015
folB_S 207120207506
uppP_S 207704208525
ribB_S 217425218078
ygiE_S 218140218910
ygiD_S 219097219888
ygiC_S 219929221089
KP1_4731_S 221095221766
yqgF_S 276783277199
KP1_4657_S 277199277762
gshB_S 277937278887
KP1_4654_S 278908279714
endA_S 279731280495
KP1_4652_S 280533281033
epd_S 293204294232
pgk_S 294272295435
fbaA_S 295533296612
yggB_S 296804297661
yggA_S 297813298448
yggE_S 298538299305
KP1_4633_S 303586303915
KP1_4632_S 304076304660
pepP_S 304684306000
KP1_4629_S 307186308388
KP1_4618_S 319637320365
KP1_4617_S 320416320727
yqfA_S 320891321550
KP1_4613_S 322883323149
KP1_4612_S 323130323540
fldB_S 323547324068
xerD_S 324169325065
dsbC_S 325088325801
KP1_4524_S 404151405551
KP1_4523_S 405559406986
KP1_4521_S 407054407827
KP1_4520_S 407824408303
galR_S 408264409280
ygdP_S 417109417639
ptsP_S 417652419898
lgt_S 420144421019
thyA_S 421026421820
ppdA_S 422092422559
argA_S 436596437927
amiC_S 438119439408
cobD_S 439426440502
pduX_S 440506441408
pduW_S 441464442678
KP1_4457_S 467356468081
KP1_4456_S 468078468863
KP1_4455_S 468874469668
KP1_4453_S 470375471112
KP1_4452_S 471114471395
cbiQ_S 471382472059
6379248Illuminacontig_0005473591yedI_S 99854100765 EMBL GBK
KP1_3554_S 102860103084
KP1_3553_S 103215103406
rcsA_S 103439104062
KP1_3551_S 104437104868
dapA4_S 116729117610
KP1_3538_S 117701118369
tyrP_S 118396119607
KP1_3536_S 119798120037
ftnA_S 120074120571
ruvA_S 147173147784
ruvB_S 147793148803
znuB_S 148867149652
znuC_S 149652150404
znuA_S 150357151426
KP1_3501_S 151442152761
msbB_S 152879153850
purT_S 166214167392
yebG_S 167528167875
KP1_3490_S 168017168679
ptrB_S 168800170860
exoX_S 170864171523
holE_S 171602171832
KP1_3486_S 171937172320
KP1_3451_S 205775206119
yeaZ_S 208307209002
yeaY_S 209041209622
fadD_S 209828211513
minE_S 212788213057
minD_S 213061213873
minC_S 213897214598
KP1_3442_S 214686215006
ycgM_S 215023215682
KP1_3440_S 215777216223
prfA_S 319157320239
hemK_S 320239321087
ychQ_S 321087321479
kdsA_S 322335323189
chaA_S 323277324377
chaB_S 324641324871
chaC_S 325008325688
tonB 378051378464
KP1_3291_S 379665379949
pfkB_S 380042380974
KP1_3289_S 381329382087
rpmI (50S ribosomal protein L35) 385595385792
rplT (50S ribosomal protein L20) 385843386199
6379205Illuminacontig_0006392399fsr_S 143602144822 EMBL GBK
ybaL_S 145048146724
gsk_S 146760148064
hemH_S 148128149090
adk_S 149219149863
rpmJ (50S ribosomal protein L36) 171217171357
rpmE2_S 171357171620
rpmE (50S ribosomal protein L31) 171357171620
lacI_S 171737172807
ptsG_S 174486174800
KP1_1275_S 203318203686
ppiD_S 203835205709
hupB_S 205924206196
lon_S 206406208868
clpX_S 208944210218
clpP_S 210469211092
tig_S 211402212700
KP1_1251_S 227148227966
KP1_1248_S 229671230849
yajR_S 231009232373
KP1_1246_S 232416233000
apbA_S 233125234036
thiJ_S 233993234592
nrdR_S 244569245018
yajI_S 245166245705
tsx_S 246006246890
KP1_1228_S 246933247628
KP1_1227_S 247653248018
KP1_1211_S 258783259649
KP1_1209_S 261601262146
KP1_1207_S 262332262973
KP1_1206_S 263242264144
phoE 330420330839
crl_S 360287360685
frsA_S 360743361987
gpt_S 362093362551
pepD_S 362809364266
yafP_S 364309364761
yafE_S 386785387555
KP1_1068_S 387643388449
yafC_S 389837390742
dkgB_S 390788391591
6379217Illuminacontig_0007378398yicE_S 4881550215 EMBL GBK
gltS_S 5086351693
glpK_S 5180853319
glpF_S 5334154192
KP1_5367_S 5463554880
sbp_S 5503256021
rpmB (50S ribosomal protein L28) 8581286048
rpmG (50S ribosomal protein L33) 8606986236
KP1_5309_S 110144111100
KP1_5307_S 111104112375
yibO_S 112385114010
yibN_S 114175114606
grxC_S 114711114962
secB_S 115023115490
KP1_5262_S 157686158396
tkrA_S 158505159476
KP1_5260_S 159501160781
KP1_5259_S 160886161821
KP1_5258_S 161825162574
KP1_5213_S 216785217816
KP1_5210_S 219725220294
prlC_S 228092230134
KP1_5202_S 230085230894
yhiP_S 231040232512
uspA_S 232769233206
yhiO_S 233589233924
pitA_S 233984235480
asd_S 293685294839
glgB_S 295078297264
glgX_S 297357299237
glgC_S 299318300613
glgA_S 300613302046
aroK_S 343204343725
aroB_S 343781344875
dam_S 346328347155
rpe_S 347173347850
gph_S 347843348604
trpS_S 348597349601
cysG_S 349677351050
nirD_S 351203351529
yhfC_S 355627356814
ppiA_S 357092357661
KP1_5076_S 357768357935
KP1_5075_S 357925358527
pabA_S 358560359123
crp_S 362554363186
KP1_5070_S 363493363897
prkB_S 363953364822
KP1_5068_S 364859365077
yheT_S 365074366096
yheS_S 366298368202
rpsL (30S ribosomal protein S12) 375013375387
rpsG (30S ribosomal protein S7) 375484375954
6379243Illuminacontig_0010304854aroC_S 3349734585 EMBL GBK
mepA_S 3458835412
yfcA_S 3541236221
yfcM_S 3622136769
KP1_3965_S 3680137082
flk_S 4669747677
KP1_3960_S 4767647804
pdxB_S 4778848924
KP1_3958_S 4898850001
truA_S 5000150813
dedA_S 5084051499
accD_S 5162352606
folX_S 6363063992
yfcG_S 6405864687
nuoA_S 7872779173
nuoB_S 7918979863
nuoC_S 7995181759
nuoE_S 8176282262
nuoF_S 8225983596
yejM_S 150593152353
KP1_3855_S 152372152599
yejK_S 152786153793
KP1_3853_S 153813154574
KP1_3852_S 154617155252
rsuA_S 159937160656
bcr_S 160653161849
KP1_3844_S 162180162524
yejE_S 164119165144
folE_S 194073194741
galS_S 196070197092
mglB_S 197389198387
mglA_S 198506200026
wzi (Wzi outer membrane protein of cps cluster) 287507287953
6379210Illuminacontig_0011263279rplS (50S ribosomal protein L19) 1535415701 EMBL GBK
rpsP (30S ribosomal protein S16) 1710717355
grpE_S 2134021930
ppnK_S 2205522933
smpA_S 2482925170
KP1_4196_S 2524025530
KP1_4197_S 2552025996
smpB_S 2610726589
ygaH_S 8636686701
emrR_S 8682287322
emrA_S 8744888620
KP1_4281_S 9031191987
6379223Illuminacontig_0012221017ispC_S 2952130723 EMBL GBK
frr_S 3095131508
pyrH_S 3165932384
tsf_S 3253233383
rpsB (30S ribosomal protein S2) 3350334228
map_S 3455135345
sfsA_S 7864379359
dksA_S 7950479977
yadB_S 8003780918
folK_S 8237282851
KP1_0965_S 8513886385
yadI_S 8645086890
yadH_S 8701387783
yadG_S 8778088706
hpt_S 8961190159
KP1_0946_S 104705105520
KP1_0945_S 105565105849
lpdA_S 106014107441
KP1_0936_S 115332116738
KP1_0935_S 116738117688
ampE_S 117808118662
ampD_S 118659119222
nadC_S 119356120249
ppdD_S 120431120862
guaC_S 123490124533
KP1_0927_S 124590124721
coaE_S 124877125497
KP1_0925_S 125497126240
yacG_S 126250126444
mutT_S 126497126889
ftsI_S 144861146627
ftsL_S 146643147008
mraW_S 147005147946
KP1_0903_S 147949148443
fruR_S 149048150052
ilvH_S 150233150754
ilvI_S 150727152451
gudP_S 165773167083
setA_S 167128168312
KP1_0882_S 168584168742
yabN_S 168824170479
tbpA_S 170808171752
yabI_S 174010174777
araC_S 174906175751
araB_S 176088177797
araA_S 177808179310
araD_S 179448180143
pdxA_S 195938196927
ksgA_S 196924197745
apaG_S 197748198125
apaH_S 198130198978
folA_S 199271199750
kefC_S 199925201790
yabF_S 201783202316
6379221Illuminacontig_0008180582yjaB_S 304765 EMBL GBK
metA_S 9221851
aceA_S 37785097
aceK_S 52006984
iclR_S 70357961
pgi 2680127232
KP1_0299_S 5301853434
KP1_0300_S 5343853794
uvrA_S 5379556620
ssb_S 5687257399
KP1_0375_S 127721128041
cbpA_S 128026128943
KP1_0378_S 129089129787
KP1_0379_S 129949130782
hmsS_S 130829131278
efp_S 164795165361
ecnA_S 165435165566
ecnB_S 165725165871
sugE_S 166015166332
blc_S 166329166862
frdD_S 166976167365
6379207Illuminacontig_0017170834KP1_4022_S 1946920368 EMBL GBK
KP1_4023_S 2046321038
KP1_4024_S 2110021549
ypeA_S 2153621976
KP1_4027_S 2198322123
amiA_S 2217323045
hemF_S 2304523944
hscB_S 120475120990
iscA_S 121065121388
KP1_4113_S 121406121792
iscS_S 121819123033
iscR_S 123213123704
yfhQ_S 123957124691
suhB_S 124812125615
glyA_S 131521132774
hmpA_S 133100134290
KP1_4132_S 134365134703
yfhA_S 134769136106
yfhG_S 136093136800
yfhK_S 136809138248
nadB_S 156883158502
yfiC_S 158487159245
srmB_S 159355160686
yfiD_S 160732161115
ung_S 161427162116
6379247Illuminacontig_0001166878ydhO_S 143399144271 EMBL GBK
KP1_3065_S 144612144959
gloA_S 145792146199
nemA_S 146278147375
ydhM_S 147429148028
anmK_S 156101157198
KP1_3049_S 157291157614
pdxH_S 157672158328
tyrS_S 158453159727
pdxY_S 159788160648
gst_S 160691161296
6379238Illuminacontig_0009160073hfq_S 77528060 EMBL GBK
hflX_S 81369416
hflK_S 948210744
hflC_S 1074711751
KP1_0445_S 1183412175
KP1_0446_S 1234812545
KP1_0467_S 2932129596
rpsF (30S ribosomal protein S6) 2993830333
priB_S 3048630653
rpsR (30S ribosomal protein S18) 3065830885
rplI (50S ribosomal protein L9) 3092731376
KP1_0513_S 7780778451
KP1_0514_S 7856579698
KP1_0515_S 7968280800
KP1_0516_S 7970980812
KP1_0517_S 8079781537
KP1_0567_S 126016126840
KP1_0568_S 126851127738
KP1_0569_S 127728128612
yjgB_S 128743129762
6379229Illuminacontig_0013150504pyrD_S 9112992166 EMBL GBK
ssuE_S 9238892963
ssuA_S 9295693918
ssuD_S 9391595060
ssuC_S 9507195862
KP1_1916_S 119222120451
msbA_S 121483123231
ihfB_S 125738126025
rpsA (30S ribosomal protein S1) 126177127850
6379206Illuminacontig_0016143027KP1_1607_S 4422645023 EMBL GBK
dcuC_S 4511646489
pagP_S 4682847346
cspE_S 4745747750
KP1_1612_S 4781748200
ybeM_S 4829049078
tatE_S 4932349529
lipA_S 4973050695
ybeF_S 5087651880
KP1_1623_S 5863959106
KP1_1624_S 5911059427
nadD_S 6035261005
holA_S 6099562017
rlpB_S 6202662616
nagD_S 8363284384
nagC_S 8451385733
nagA_S 8574286890
nagB_S 8700487804
nagE_S 8812090075
glnS_S 9025491921
KP1_1656_S 9326193761
KP1_1657_S 9380994141
fur_S 9922599677
fldA_S 99969100568
KP1_1661_S 100651101013
ybfF_S 101078101851
KP1_1663_S 101891102583
cydA_S 133613135184
cydB_S 135200136339
KP1_1696_S 136593136883
KP1_1697_S 137033137437
tolQ_S 137434138126
tolR_S 138130138558
6379216Illuminacontig_002098379KP1_0122_S 3251176 EMBL GBK
btuB_S 11212977
KP1_0120_S 30203142
trmA_S 33444444
KP1_0118_S 44994858
yijC_S 48745506
rpmE (50S ribosomal protein L31) 2907429286
cpxP_S 3978640289
cpxR_S 4043941137
cpxA_S 4113442507
KP1_0077_S 4257143245
sodA_S 4331843944
rhaT_S 4422845262
rhaR_S 4529546140
rhaS_S 4621447050
rhaB_S 4736148827
rhaA_S 4881850083
rhaD_S 5026051090
bipA_S 8078882611
glnA_S 8299084399
glnL_S 8458885637
glnG_S 8564687055
hemN_S 8731688689
KP1_0026_S 8887889390
engB_S 8997590607
polA_S 9095593747
6379234Illuminacontig_002187831rpmH (50S ribosomal protein L34) 3805638196 EMBL GBK
atpF_S 6644766911
atpE_S 6696867207
atpB_S 6725668071
atpI_S 6808068532
gidB_S 6907769700
rbsC_S 8139082355
rbsB_S 8238383273
rbsK_S 8337784306
yieP_S 8670987410
6379208Illuminacontig_002286439ilvM_S 53585615 EMBL GBK
ilvE_S 56356564
ilvD_S 66258475
ilvA_S 853510022
ilvY_S 1001910993
cyaY_S 4624846568
KP1_0167_S 4670746910
dapF_S 4694347770
KP1_0169_S 4776748474
xerC_S 4847149373
yigB_S 4937350089
rhtB_S 5977660396
pldB_S 6050661498
KP1_0183_S 6154362343
yigM_S 6243263331
metR_S 6321964172
udp_S 6782568586
yigN_S 6872270170
ubiE_S 7024170996
KP1_0193_S 7101071615
ubiB_S 7161273252
tatB_S 7363774173
tatC_S 7417674955
tatD_S 7500075791
rfaH_S 7578876276
fre_S 7798078681
fadA_S 7878979952
6379245Illuminacontig_001969632holD_S 13801793 EMBL GBK
rimI_S 17622208
yjjG_S 22232900
prfC_S 29914580
deoA_S 903010352
deoB_S 1040511628
KP1_0801_S 1173112450
lplA_S 1253113547
smp_S 1354714194
serB_S 1427815270
sms_S 1528016662
nadR_S 1668417916
yjjK_S 1809219759
creB_S 2516825857
creC_S 2585727281
arcA_S 2876329479
lasT_S 3011230798
thrA_S 3111833622
thrB_S 3362434553
rpsT (30S ribosomal protein S20) 4999450257
6379251Illuminacontig_001463175ybjE_S 1793518834 EMBL GBK
hcp_S 1897820630
hcr_S 2064121609
KP1_1855_S 3668437400
KP1_1853_S 3864839136
potI_S 3919440081
potH_S 4003640989
6379225Illuminacontig_002361555ybiR_S 2729528407 EMBL GBK
mntR_S 2840428877
KP1_1803_S 2906329188
ybiP_S 2944831037
ompX_S 3112831643
ybiF_S 3199532882
dps_S 3312033623
glnH_S 3405434800
6379242Illuminacontig_002459980KP1_1734_S 3551036433 EMBL GBK
KP1_1732_S 3753837906
KP1_1731_S 3798938543
KP1_1730_S 3858139315
KP1_1729_S 3947040681
KP1_1728_S 4101241257
KP1_1727_S 4138341688
KP1_1726_S 4174042006
ybhE_S 4211443109
ybhA_S 4333844156
6379253 Illumina contig_0025 56427
6379218Illuminacontig_001851640yjjA_S 3973040224 EMBL GBK
dnaC_S 4029041027
dnaT_S 4103041569
yjjB_S 4167342161
yjjP_S 4213742913
KP1_0775_S 4319544379
KP1_0776_S 4439645277
fhuF_S 4908949877
ycdT_S 4998951035
mtr_S 5118651539
6379246Illuminacontig_001549472betA_S 931811027 EMBL GBK
betB_S 1099612468
betT_S 1319815231
ykfE_S 1527815805
6379204Illuminacontig_002640054mdh 49275403 EMBL GBK
KP1_4977_S 2460624797
KP1_4978_S 2501126027
KP1_4980_S 2685927311
accB_S 2733427801
accC_S 2781229161
KP1_4984_S 2927229514
prmA_S 3096731848
KP1_4987_S 3181832048
6379220Illuminacontig_002734424zraP_S 62646701 EMBL GBK
KP1_0242_S 67057406
KP1_0241_S 74137685
KP1_0239_S 78728462
nfi_S 85059176
hemE_S 918910253
nudC_S 1029411067
rsd_S 1116111658
rpoB 2789028390
rplL (50S ribosomal protein L7/L12) 3037130736
rplJ (50S ribosomal protein L10) 3080331300
rplA (50S ribosomal protein L1) 3171332417
rplK (50S ribosomal protein L11) 3242132849
6379215Illuminacontig_002826276yrdA_S 305859 EMBL GBK
KP1_4999_S 8351092
aroE_S 10891907
yrdC_S 19112528
yrdD_S 24883030
KP1_5003_S 30573530
smf_S 35024626
def_S 47555264
KP1_5012_S 1021810586
rplQ (50S ribosomal protein L17) 1069511081
KP1_5015_S 1112212111
rpsD (30S ribosomal protein S4) 1213712757
rpsK (30S ribosomal protein S11) 1279113180
rpsM (30S ribosomal protein S13) 1319713553
rpmJ (50S ribosomal protein L36) 1370013816
secY_S 1385015181
rplO (50S ribosomal protein L15) 1518915623
rpmD (50S ribosomal protein L30) 1562715806
rpsE (30S ribosomal protein S5) 1581016313
rplR (50S ribosomal protein L18) 1632816681
rplF (50S ribosomal protein L6) 1669117224
rpsH (30S ribosomal protein S8) 1723717629
rpsN (30S ribosomal protein S14) 1766317968
rplE (50S ribosomal protein L5) 1798318522
rplX (50S ribosomal protein L24) 1853718851
rplN (50S ribosomal protein L14) 1886219233
rpsQ (30S ribosomal protein S17) 1939919653
rpmC (50S ribosomal protein L29) 1965319844
rplP (50S ribosomal protein L16) 1984420254
rpsC (30S ribosomal protein S3) 2026720965
rplV (50S ribosomal protein L22) 2098321315
rpsS (30S ribosomal protein S19) 2133021608
rplB (50S ribosomal protein L2) 2162522446
rplW (50S ribosomal protein L23) 2246422766
rplD (50S ribosomal protein L4) 2276323368
rplC (50S ribosomal protein L3) 2337924008
rpsJ (30S ribosomal protein S10) 2404124352
6379241 Illumina contig_0029 20534
6379232 Illumina contig_0030 19228
6379209 Illumina contig_0031 6537
6379228 Illumina contig_0032 4183
6379237 Illumina contig_0035 2675
6379213 Illumina contig_0033 1632
6379236 Illumina contig_0034 1371
6379250 Illumina contig_0036 908
6379222 Illumina contig_0037 784
6379235 Illumina contig_0038 667
6379240 Illumina contig_0039 596
6379244 Illumina contig_0040 585
6379231 Illumina contig_0043 552
6379233 Illumina contig_0041 551
6379224 Illumina contig_0042 544
6379211 Illumina contig_0044 491
6379227 Illumina contig_0045 478
6379249 Illumina contig_0046 445
6379239 Illumina contig_0047 426
6379252 Illumina contig_0048 353
6379214 Illumina contig_0049 350
6379230 Illumina contig_0050 305