Sequence bin for ERR926443

Contig summary statistics

Contigs
58
Total length
5,123,501
Minimum length
310
Maximum length
514,690
Mean length
88,337
N50
258,108
L50
8
N90
86,497
L90
21
N95
82,240
L95
24

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
6378793Illuminacontig_0003514690KP1_3440_S 5282253268 EMBL GBK
ycgM_S 5336354022
KP1_3442_S 5403954359
minC_S 5444755145
minD_S 5516955981
minE_S 5598556254
fadD_S 5752959214
yeaY_S 5942060001
yeaZ_S 6004060735
KP1_3451_S 6292263266
KP1_3486_S 9669797080
holE_S 9718497414
exoX_S 9749398152
ptrB_S 98156100216
KP1_3490_S 100337100996
yebG_S 101136101483
purT_S 101628102806
msbB_S 109887110861
KP1_3501_S 110979112298
znuA_S 112314113384
znuC_S 113337114089
znuB_S 114089114874
ruvB_S 114938115948
ruvA_S 115957116568
ftnA_S 143186143683
KP1_3536_S 143719143958
tyrP_S 144150145361
KP1_3538_S 145386146054
dapA4_S 146153147034
KP1_3551_S 164437164868
rcsA_S 165244165867
KP1_3553_S 165900166091
KP1_3554_S 166222166446
yedI_S 168541169452
wzi (Wzi outer membrane protein of cps cluster) 260655261101
mglA_S 344535346055
mglB_S 346174347172
galS_S 347469348491
folE_S 349820350488
yejE_S 375852376877
KP1_3844_S 378472378816
bcr_S 379148380344
rsuA_S 380341381060
KP1_3852_S 385742386377
KP1_3853_S 386421387182
yejK_S 387202388209
KP1_3855_S 388396388623
yejM_S 388642390402
nuoF_S 451848453185
nuoE_S 453182453682
nuoC_S 453685455493
nuoB_S 455580456254
nuoA_S 456270456716
yfcD_S 468708469259
yfcF_S 469931470569
yfcG_S 470750471379
folX_S 471445471807
accD_S 482811483794
dedA_S 483917484576
truA_S 484603485415
KP1_3958_S 485415486428
pdxB_S 486492487628
KP1_3960_S 487612487740
flk_S 487739488716
KP1_3965_S 493617493898
yfcM_S 493930494478
yfcA_S 494478495287
mepA_S 495287496111
aroC_S 496114497202
6378805Illuminacontig_0002455175KP1_2703_S 329253330008 EMBL GBK
KP1_2702_S 330185330496
KP1_2700_S 331064332092
KP1_2697_S 333695334366
yneH_S 348005348931
yneI_S 349012349905
yneJ_S 350502351380
KP1_2673_S 351334351816
KP1_2672_S 351961352905
6378783Illuminacontig_0008336339KP1_4987_S 79758205 EMBL GBK
prmA_S 81759056
KP1_4984_S 1050910751
accC_S 1086212211
accB_S 1222212689
KP1_4980_S 1271213164
KP1_4979_S 1338813996
KP1_4978_S 1399615012
KP1_4977_S 1522615417
mdh 3447934955
rplM (50S ribosomal protein L13) 4861149039
rpsI (30S ribosomal protein S9) 4905549447
ptsO_S 6722967501
KP1_4927_S 6749868352
ptsN_S 6839868886
yhbH_S 6895769244
rpoN_S 6926770700
yhbG_S 7074871473
yhbN_S 7148072025
KP1_4921_S 7199472569
yrbI_S 7256673132
rplU (50S ribosomal protein L21) 8190182212
rpmA (50S ribosomal protein L27) 8223382490
infB 100637100954
rpsO (30S ribosomal protein S15) 103595103864
yhbW_S 110778111785
yhbV_S 111929112822
yhbU_S 112813113808
KP1_4871_S 114030114554
KP1_4870_S 114548115051
KP1_4868_S 115378115821
yhbO_S 115783116448
KP1_4865_S 117171118211
yraP_S 118333118908
yraO_S 118918119544
KP1_4861_S 119534119920
KP1_4826_S 148342148638
KP1_4825_S 148635149033
KP1_4824_S 149036149341
KP1_4823_S 149387149755
KP1_4822_S 149905150288
KP1_4816_S 157028157582
ygjU_S 157598158845
ygjT_S 159112160083
ygjR_S 160355161344
KP1_4812_S 161418161918
rpsU (30S ribosomal protein S21) 233043233258
ureB_S 239799240119
ureA_S 240129240431
ureD_S 240441241265
KP1_4750_S 241663242280
folB_S 242385242771
uppP_S 242970243791
ribB_S 252691253344
ygiE_S 253406254176
ygiD_S 254363255154
ygiC_S 255199256359
KP1_4731_S 256365257036
yqgF_S 323276323692
KP1_4657_S 323692324255
gshB_S 324430325380
KP1_4654_S 325401326207
endA_S 326224326988
KP1_4652_S 327026327526
6378828Illuminacontig_0001310210prfA_S 3388034962 EMBL GBK
hemK_S 3496235810
ychQ_S 3581036202
kdsA_S 3705837912
chaA_S 3799939099
chaB_S 3936339593
chaC_S 3973040410
tonB 8986490277
KP1_3291_S 9147991763
pfkB_S 9185892790
KP1_3289_S 9314793905
rpmI (50S ribosomal protein L35) 9740997606
rplT (50S ribosomal protein L20) 9765798013
ydhO_S 286613287485
KP1_3065_S 287826288173
gloA_S 289006289413
nemA_S 289492290589
ydhM_S 290643291242
anmK_S 299313300410
KP1_3049_S 300503300826
pdxH_S 300884301540
tyrS_S 301665302939
pdxY_S 303001303861
gst_S 303904304509
6378838Illuminacontig_0009274826pyrD_S 2373424771 EMBL GBK
ssuE_S 2499425569
ssuA_S 2556226524
ssuD_S 2652127666
ssuC_S 2767728468
KP1_1916_S 5771758946
msbA_S 5997861726
ihfB_S 6423364520
rpsA (30S ribosomal protein S1) 6467266345
ybjE_S 106958107857
hcp_S 108001109653
hcr_S 109664110632
KP1_1855_S 125703126419
KP1_1853_S 127667128155
potI_S 128213129100
potH_S 129055130008
ybiR_S 179424180536
mntR_S 180533181006
KP1_1803_S 181192181317
ybiP_S 181577183166
ompX_S 183257183769
ybiF_S 184121185008
dps_S 185246185749
glnH_S 186158186904
KP1_1734_S 250065250988
KP1_1732_S 252094252459
KP1_1731_S 252541253095
KP1_1730_S 253137253871
KP1_1729_S 254027255238
KP1_1728_S 255567255812
KP1_1727_S 255939256244
KP1_1726_S 256296256562
ybhE_S 256673257668
ybhA_S 257897258715
6378813Illuminacontig_0010274259pitA_S 3651038006 EMBL GBK
yhiO_S 3806238397
uspA_S 3878039217
yhiP_S 3947440946
prlC_S 4183443876
KP1_5210_S 5166652235
KP1_5213_S 5415455185
KP1_5258_S 109276110025
KP1_5259_S 110029110964
KP1_5260_S 111069112349
tkrA_S 112374113345
KP1_5262_S 113454114164
secB_S 163696164163
grxC_S 164224164475
yibN_S 164580165011
yibO_S 165176166801
KP1_5307_S 166811168082
KP1_5309_S 168086169033
rpmG (50S ribosomal protein L33) 187755187922
rpmB (50S ribosomal protein L28) 187943188179
sbp_S 218927219916
KP1_5367_S 220068220313
glpF_S 220756221607
glpK_S 221629223140
gltS_S 223255224085
yicE_S 224733226133
6378791Illuminacontig_0007269135holD_S 13801793 EMBL GBK
rimI_S 17622208
yjjG_S 22232900
prfC_S 29914580
deoA_S 1044711769
deoB_S 1182213045
KP1_0801_S 1314813867
lplA_S 1394814964
smp_S 1496415611
serB_S 1569516687
sms_S 1669718079
nadR_S 1810119333
yjjK_S 1942721094
creB_S 2650327192
creC_S 2719228616
arcA_S 3009830814
lasT_S 3144732133
thrA_S 3245334957
thrB_S 3495935888
rpsT (30S ribosomal protein S20) 5132751590
yabF_S 6721067743
kefC_S 6773669601
folA_S 6977570254
apaH_S 7050671354
apaG_S 7135971736
ksgA_S 7173972560
pdxA_S 7255773546
araD_S 8944690141
araA_S 9027991781
araB_S 9179293501
araC_S 9383994684
yabI_S 9481395580
tbpA_S 9783898782
yabN_S 99111100766
KP1_0882_S 100848101006
setA_S 101274102458
gudP_S 102492103802
ilvI_S 117123118847
ilvH_S 118820119341
fruR_S 119522120526
KP1_0903_S 121131121625
mraW_S 121628122569
ftsL_S 122566122931
ftsI_S 122947124713
mutT_S 142684143076
yacG_S 143129143323
KP1_0925_S 143333144076
coaE_S 144076144696
KP1_0927_S 144852144983
guaC_S 145040146083
ppdD_S 148711149142
nadC_S 149324150217
ampD_S 150351150914
ampE_S 150911151765
KP1_0935_S 152001152951
KP1_0936_S 152951154357
lpdA_S 162252163679
KP1_0945_S 163844164128
KP1_0946_S 164174164989
hpt_S 179351179899
yadG_S 180806181732
yadH_S 181729182499
yadI_S 182622183062
KP1_0965_S 183127184374
folK_S 186661187140
yadB_S 188594189475
dksA_S 189535190008
sfsA_S 190153190869
map_S 234053234847
rpsB (30S ribosomal protein S2) 235170235895
tsf_S 236015236866
pyrH_S 237017237742
frr_S 237893238450
ispC_S 238679239881
6378811Illuminacontig_0011258108fsr_S 7450075720 EMBL GBK
ybaL_S 7594677622
gsk_S 7765878962
hemH_S 7902679988
adk_S 8011780761
rpmJ (50S ribosomal protein L36) 102095102235
rpmE2_S 102235102498
rpmE (50S ribosomal protein L31) 102235102498
lacI_S 102614103684
ptsG_S 105363105677
KP1_1275_S 134148134516
ppiD_S 134665136539
hupB_S 136754137026
lon_S 137236139698
clpX_S 139774141048
clpP_S 141299141922
tig_S 142232143530
KP1_1251_S 157985158803
KP1_1248_S 160510161688
yajR_S 161848163212
KP1_1246_S 163256163840
apbA_S 163939164850
thiJ_S 164807165406
nrdR_S 175377175826
yajI_S 175974176513
tsx_S 176812177696
KP1_1228_S 177751178446
KP1_1227_S 178470178835
KP1_1211_S 189597190463
KP1_1209_S 192415192960
KP1_1207_S 193147193788
KP1_1206_S 194055194957
6378784Illuminacontig_0012248579tolR_S 50305458 EMBL GBK
tolQ_S 54626154
KP1_1697_S 61516555
KP1_1696_S 67056995
cydB_S 71278266
cydA_S 82829853
KP1_1663_S 4262743319
ybfF_S 4335944132
KP1_1661_S 4419744559
fldA_S 4464245241
fur_S 4553345985
KP1_1657_S 4660346935
KP1_1656_S 4698347483
metH_S 4846048768
glnS_S 4882250489
nagE_S 5066852623
nagB_S 5293853738
nagA_S 5385255000
nagC_S 5500956229
nagD_S 5634657098
rlpB_S 7812178711
holA_S 7872079742
nadD_S 7973280385
KP1_1624_S 8131081627
KP1_1623_S 8163182098
ybeF_S 8884889852
lipA_S 9003390998
tatE_S 9118991395
ybeM_S 9163892426
KP1_1612_S 9251692899
cspE_S 9296793260
pagP_S 9337193889
dcuC_S 9422895601
KP1_1607_S 9569496491
ykfE_S 173905174432
betT_S 174479176512
betB_S 177242178714
betA_S 178683180392
6378815Illuminacontig_0015217316yeaE_S 6336564249 EMBL GBK
KP1_2220_S 6430665190
gapA 6556866017
yeaA_S 6659967012
KP1_2224_S 6705667334
KP1_2225_S 6742967773
spy_S 9669097172
nadE_S 9822399050
osmE_S 9933399671
celA_S 99950100270
celC_S 101830102177
6378786Illuminacontig_0004199785yjaB_S 265726 EMBL GBK
metA_S 8831812
aceA_S 37395058
aceK_S 51616945
iclR_S 69967922
pgi 2594926380
KP1_0299_S 5529755713
KP1_0300_S 5571756073
uvrA_S 5607458899
ssb_S 5915159675
KP1_0375_S 130157130477
cbpA_S 130462131379
KP1_0378_S 131525132223
KP1_0379_S 132386133219
hmsS_S 133265133714
efp_S 184000184566
ecnA_S 184640184771
ecnB_S 184930185076
sugE_S 185220185537
blc_S 185534186067
frdD_S 186181186570
6378800Illuminacontig_0016179320epd_S 5121540 EMBL GBK
pgk_S 15802743
fbaA_S 28413920
yggB_S 41114968
yggA_S 51205755
yggE_S 58456612
KP1_4633_S 1089211221
KP1_4632_S 1138211966
pepP_S 1199013306
KP1_4629_S 1449215694
KP1_4618_S 2683327561
KP1_4617_S 2761127922
yqfA_S 2808628745
KP1_4613_S 3012530391
KP1_4612_S 3037230782
fldB_S 3078931310
xerD_S 3141132307
dsbC_S 3233033043
KP1_4524_S 107640109040
KP1_4523_S 109048110475
KP1_4521_S 110543111316
KP1_4520_S 111313111792
galR_S 111753112769
ygdP_S 120597121127
ptsP_S 121140123386
lgt_S 123632124507
thyA_S 124514125308
ppdA_S 125579126046
argA_S 139690141021
amiC_S 141213142502
cobD_S 142520143596
pduX_S 143600144502
pduW_S 144558145772
KP1_4457_S 170443171168
KP1_4456_S 171165171950
KP1_4455_S 171961172755
KP1_4453_S 173462174199
KP1_4452_S 174201174482
cbiQ_S 174469175146
6378798Illuminacontig_0017172428KP1_4022_S 1913520034 EMBL GBK
KP1_4023_S 2012920704
KP1_4024_S 2076621215
ypeA_S 2120221642
KP1_4027_S 2164921789
amiA_S 2183922711
hemF_S 2271123610
hscB_S 115215115730
iscA_S 115805116128
KP1_4113_S 116146116532
iscS_S 116559117773
iscR_S 117952118443
yfhQ_S 118678119412
suhB_S 119533120336
glyA_S 133021134274
hmpA_S 134600135790
KP1_4132_S 135865136203
yfhA_S 136269137606
yfhG_S 137593138300
yfhK_S 138309139748
nadB_S 158386160005
yfiC_S 159990160748
srmB_S 160859162190
yfiD_S 162236162619
ung_S 162932163621
6378827Illuminacontig_0005169962hfq_S 77528060 EMBL GBK
hflX_S 81369416
hflK_S 948210744
hflC_S 1074711751
KP1_0445_S 1183412175
KP1_0446_S 1234712544
KP1_0467_S 2930729582
rpsF (30S ribosomal protein S6) 2992330318
priB_S 3047130638
rpsR (30S ribosomal protein S18) 3064330870
rplI (50S ribosomal protein L9) 3091231361
KP1_0513_S 7123971883
KP1_0514_S 7198973122
KP1_0515_S 7310674224
KP1_0516_S 7313374236
KP1_0517_S 7422174961
KP1_0567_S 124232125056
KP1_0568_S 125067125954
KP1_0569_S 125944126828
yjgB_S 126959127978
6378787Illuminacontig_0018156147KP1_2532_S 132533132868 EMBL GBK
ydgB_S 132865133587
ydgI_S 133624135006
KP1_2535_S 135184136134
KP1_2536_S 136131136313
6378825 Illumina contig_0014 150626
6378816Illuminacontig_0019105165asd_S 2125722411 EMBL GBK
glgB_S 2265024836
glgX_S 2492926809
glgC_S 2689028185
glgA_S 2818529618
aroK_S 6995070471
aroB_S 7052771621
dam_S 7307173898
rpe_S 7391674593
gph_S 7458675347
trpS_S 7534076344
cysG_S 7641777790
nirD_S 7794478270
yhfC_S 8236883555
ppiA_S 8383284401
KP1_5076_S 8450884675
KP1_5075_S 8466585267
pabA_S 8530085863
crp_S 8929489926
KP1_5070_S 9023390637
prkB_S 9069291561
KP1_5068_S 9159891816
yheT_S 9181392835
yheS_S 9303994943
rpsL (30S ribosomal protein S12) 101751102125
rpsG (30S ribosomal protein S7) 102222102692
6378790Illuminacontig_0020100926yieP_S 4081109 EMBL GBK
rbsK_S 35124441
rbsB_S 45455435
rbsC_S 54636428
gidB_S 1811818741
atpI_S 1928619738
atpB_S 1974620561
atpE_S 2061120850
atpF_S 2090721371
rpmH (50S ribosomal protein L34) 4969649836
6378839Illuminacontig_002199408KP1_0122_S 3251176 EMBL GBK
btuB_S 11212959
KP1_0120_S 30023124
trmA_S 33264426
KP1_0118_S 44784837
yijC_S 48535485
rpmE (50S ribosomal protein L31) 3011330325
cpxP_S 4083341336
cpxR_S 4148642184
cpxA_S 4218143554
KP1_0077_S 4362244296
sodA_S 4436944995
rhaT_S 4527946313
rhaR_S 4634647191
rhaS_S 4726548101
rhaB_S 4841249878
rhaA_S 4986951134
rhaD_S 5128452114
bipA_S 8175083573
glnA_S 8395285361
glnL_S 8555086599
glnG_S 8660888017
hemN_S 8827489647
KP1_0026_S 8983690342
engB_S 9092691558
polA_S 9190694698
6378829Illuminacontig_001389491rplS (50S ribosomal protein L19) 1537815725 EMBL GBK
rpsP (30S ribosomal protein S16) 1713117379
grpE_S 2138421974
ppnK_S 2209922977
smpA_S 2487325214
KP1_4196_S 2528125571
KP1_4197_S 2556126037
smpB_S 2614826630
ygaH_S 7890479239
emrR_S 7936079860
emrA_S 7998681158
KP1_4281_S 8284984525
6378810Illuminacontig_002286497ilvM_S 53745631 EMBL GBK
ilvE_S 56486577
ilvD_S 66388488
ilvA_S 854810035
ilvY_S 1003211006
cyaY_S 4625946579
KP1_0167_S 4672646929
dapF_S 4696247789
KP1_0169_S 4778648493
xerC_S 4849049392
yigB_S 4939250108
rhtB_S 5980760427
pldB_S 6053761529
KP1_0183_S 6157462374
yigM_S 6246363362
metR_S 6325064203
udp_S 6785968620
yigN_S 6875670204
ubiE_S 7027571030
KP1_0193_S 7104471649
ubiB_S 7164673286
tatA_S 7336873667
tatB_S 7367174207
tatC_S 7421074989
tatD_S 7503475825
rfaH_S 7582276310
ubiD_S 7648977964
fre_S 7801478715
fadA_S 7882179984
6378799Illuminacontig_000686096yjjA_S 7418874679 EMBL GBK
dnaC_S 7474575482
dnaT_S 7548576024
yjjB_S 7612776615
yjjP_S 7659177367
KP1_0775_S 7764778831
KP1_0776_S 7884879729
fhuF_S 8354884336
ycdT_S 8444385489
6378796 Illumina contig_0023 83666
6378818Illuminacontig_002482240dkgB_S 2361039 EMBL GBK
yafC_S 10851990
KP1_1068_S 33794185
yafE_S 42775047
yafP_S 2573026182
pepD_S 2622527682
gpt_S 2794028398
frsA_S 2850429748
crl_S 2980630204
phoE 7857378992
6378822Illuminacontig_002576374ycfW_S 1016511409 EMBL GBK
ycfV_S 1140912110
ycfU_S 1210313311
mfd_S 1360717053
ycfS_S 1721718176
ycfQ_S 1881219447
KP1_2092_S 2767828034
ptsG2_S 2829629729
ycfH_S 3002630820
holB_S 3083131835
tmk_S 3183232473
yceG_S 3246333485
pabC_S 3348734296
fabF_S 3442235663
fabG_S 3620036934
fabD_S 3694737876
fabH_S 3789238845
plsX_S 3889939996
rpmF (50S ribosomal protein L32) 4019940372
KP1_2077_S 4038940910
yceF_S 4105241636
mdoC_S 6700068160
KP1_2048_S 6819568788
KP1_2047_S 6885569400
ycdZ_S 6953270014
ycdY_S 7011870672
KP1_2044_S 7069571432
6378801Illuminacontig_002635068rplK (50S ribosomal protein L11) 21832611 EMBL GBK
rplA (50S ribosomal protein L1) 26153319
rplJ (50S ribosomal protein L10) 37334230
rplL (50S ribosomal protein L7/L12) 42974662
rpoB 66437143
rsd_S 2337423871
nudC_S 2396524738
hemE_S 2477925843
nfi_S 2585626527
KP1_0239_S 2657027160
KP1_0241_S 2734727619
KP1_0242_S 2762628327
zraP_S 2833128768
6378788Illuminacontig_002726261rpsJ (30S ribosomal protein S10) 18982209 EMBL GBK
rplC (50S ribosomal protein L3) 22422871
rplD (50S ribosomal protein L4) 28823487
rplW (50S ribosomal protein L23) 34843786
rplB (50S ribosomal protein L2) 38044625
rpsS (30S ribosomal protein S19) 46424920
rplV (50S ribosomal protein L22) 49355267
rpsC (30S ribosomal protein S3) 52855983
rplP (50S ribosomal protein L16) 59966406
rpmC (50S ribosomal protein L29) 64066597
rpsQ (30S ribosomal protein S17) 65976851
rplN (50S ribosomal protein L14) 70177388
rplX (50S ribosomal protein L24) 73997713
rplE (50S ribosomal protein L5) 77288267
rpsN (30S ribosomal protein S14) 82828587
rpsH (30S ribosomal protein S8) 86219013
rplF (50S ribosomal protein L6) 90269559
rplR (50S ribosomal protein L18) 95699922
rpsE (30S ribosomal protein S5) 993710440
rpmD (50S ribosomal protein L30) 1044410623
rplO (50S ribosomal protein L15) 1062711061
secY_S 1106912400
rpmJ (50S ribosomal protein L36) 1243412550
rpsM (30S ribosomal protein S13) 1269713053
rpsK (30S ribosomal protein S11) 1307013459
rpsD (30S ribosomal protein S4) 1349314113
KP1_5015_S 1413915128
rplQ (50S ribosomal protein L17) 1516915555
KP1_5012_S 1566416032
def_S 2098621495
smf_S 2162422748
KP1_5003_S 2272023193
yrdD_S 2322023762
yrdC_S 2372224339
aroE_S 2434325161
KP1_4999_S 2515825415
yrdA_S 2539125945
6378817 Illumina contig_0029 20920
6378831 Illumina contig_0030 20561
6378809 Illumina contig_0031 4279
6378789 Illumina contig_0028 2776
6378833 Illumina contig_0032 2093
6378806 Illumina contig_0033 1601
6378836 Illumina contig_0034 1316
6378837 Illumina contig_0035 1044
6378823 Illumina contig_0036 900
6378785 Illumina contig_0037 845
6378835 Illumina contig_0038 784
6378819 Illumina contig_0039 688
6378814 Illumina contig_0040 614
6378797 Illumina contig_0042 481
6378832 Illumina contig_0043 465
6378840 Illumina contig_0041 447
6378807 Illumina contig_0044 438
6378834 Illumina contig_0045 419
6378821 Illumina contig_0048 408
6378824 Illumina contig_0046 403
6378820 Illumina contig_0047 398
6378802 Illumina contig_0049 386
6378794 Illumina contig_0051 383
6378830 Illumina contig_0050 380
6378804 Illumina contig_0053 367
6378803 Illumina contig_0052 361
6378795 Illumina contig_0054 355
6378826 Illumina contig_0055 332
6378812 Illumina contig_0057 325
6378792 Illumina contig_0056 325
6378808 Illumina contig_0058 310