Sequence bin for GCA_001404095.1

Contig summary statistics

Contigs
46
Total length
5,271,927
Minimum length
567
Maximum length
412,668
Mean length
114,608
N50
250,027
L50
8
N90
73,440
L90
23
N95
47,220
L95
28

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
5181742CXPD01000018.1412668ybtS 3211625 EMBL GBK
ybtX 16532933
ybtQ 29264728
ybtP 47156427
ybtA 66847548
ybtA 66847643
irp2 783413941
irp1 1402923520
ybtU 2351724617
ybtT 2461425417
ybtT 2461425378
ybtE 2542126998
fyuA 2712929150
wzi (Wzi outer membrane protein of cps cluster) 145920146366
mglA_S 229798231318
mglB_S 231437232435
galS_S 232732233754
folE_S 235083235751
yejE_S 261116262141
KP1_3844_S 263736264080
bcr_S 264412265608
rsuA_S 265605266324
KP1_3852_S 271006271641
KP1_3853_S 271685272446
yejK_S 272466273473
KP1_3855_S 273660273887
yejM_S 273906275666
nuoF_S 337140338477
nuoE_S 338474338974
nuoC_S 338977340785
nuoB_S 340872341546
nuoA_S 341562342008
yfcD_S 354000354551
yfcF_S 355223355861
yfcG_S 356042356671
folX_S 356737357099
accD_S 368108369091
dedA_S 369215369874
truA_S 369901370713
KP1_3958_S 370713371726
pdxB_S 371790372926
KP1_3960_S 372910373038
flk_S 373037374014
KP1_3965_S 378915379196
yfcM_S 379228379776
yfcA_S 379776380585
mepA_S 380585381409
aroC_S 381412382500
5181755CXPD01000017.1383671rplT (50S ribosomal protein L20) 114863115219 EMBL GBK
rpmI (50S ribosomal protein L35) 115270115467
KP1_3289_S 118971119729
pfkB_S 120086121018
KP1_3291_S 121113121397
tonB 122599123012
chaC_S 172169172849
chaB_S 172986173216
chaA_S 173480174580
kdsA_S 174667175521
ychQ_S 176377176769
hemK_S 176769177617
prfA_S 177617178699
KP1_3440_S 260567261013
ycgM_S 261108261767
KP1_3442_S 261784262104
minC_S 262192262890
minD_S 262914263726
minE_S 263730263999
fadD_S 265274266959
yeaY_S 267165267746
yeaZ_S 267785268480
KP1_3451_S 270668271012
KP1_3486_S 304438304821
holE_S 304925305155
exoX_S 305234305893
ptrB_S 305897307957
KP1_3490_S 308078308737
yebG_S 308877309224
purT_S 309369310547
msbB_S 317627318601
KP1_3501_S 318719320038
znuA_S 320054321124
znuC_S 321077321829
znuB_S 321829322614
ruvB_S 322678323688
ruvA_S 323697324308
ftnA_S 350924351421
KP1_3536_S 351457351696
tyrP_S 351888353099
KP1_3538_S 353124353792
dapA4_S 353891354772
KP1_3551_S 365369365800
rcsA_S 366176366799
KP1_3553_S 366832367023
KP1_3554_S 367155367379
yedI_S 369474370385
5181747CXPD01000021.1376368rplS (50S ribosomal protein L19) 1532415671 EMBL GBK
rpsP (30S ribosomal protein S16) 1707717325
grpE_S 2133021920
ppnK_S 2204522923
smpA_S 2481925160
KP1_4196_S 2522725517
KP1_4197_S 2550725983
smpB_S 2609426576
ygaH_S 7884379178
emrR_S 7929979799
emrA_S 7992581097
KP1_4281_S 8278884464
cbiQ_S 244637245314
KP1_4452_S 245301245582
KP1_4453_S 245584246321
KP1_4455_S 247028247822
KP1_4456_S 247833248618
KP1_4457_S 248615249340
pduW_S 274012275226
pduX_S 275282276184
cobD_S 276188277264
amiC_S 277282278571
argA_S 278763280094
ppdA_S 293737294204
thyA_S 294475295269
lgt_S 295276296151
ptsP_S 296397298643
ygdP_S 298656299186
galR_S 307015308031
KP1_4520_S 307992308471
KP1_4521_S 308468309241
KP1_4523_S 309309310736
KP1_4524_S 310744312144
5181734CXPD01000011.1348937yeaE_S 6291163795 EMBL GBK
KP1_2220_S 6385264736
gapA 6511465563
yeaA_S 6614566558
KP1_2224_S 6660266880
KP1_2225_S 6697567319
spy_S 9635196833
nadE_S 9788598712
osmE_S 9899599333
celA_S 9961299932
celC_S 101492101839
5181749CXPD01000024.1300292KP1_4652_S 2415024650 EMBL GBK
endA_S 2468825452
KP1_4654_S 2546926275
gshB_S 2629627246
KP1_4657_S 2742127984
yqgF_S 2798428400
KP1_4731_S 9101291683
ygiC_S 9168992849
ygiD_S 9289493685
ygiE_S 9387294642
ribB_S 9470495357
uppP_S 104257105078
folB_S 105277105663
KP1_4750_S 105768106385
ureD_S 106783107607
ureA_S 107617107919
ureB_S 107929108249
rpsU (30S ribosomal protein S21) 114790115005
KP1_4812_S 194054194554
ygjR_S 194628195617
ygjT_S 195889196860
ygjU_S 197127198374
KP1_4816_S 198390198944
KP1_4822_S 205684206067
KP1_4823_S 206217206585
KP1_4824_S 206631206936
KP1_4825_S 206939207337
KP1_4826_S 207334207630
KP1_4861_S 223412223798
yraO_S 223788224414
yraP_S 224424224999
KP1_4865_S 225121226161
yhbO_S 226884227549
KP1_4868_S 227511227954
KP1_4870_S 228281228784
KP1_4871_S 228778229302
yhbU_S 229524230519
yhbV_S 230510231403
yhbW_S 231547232554
rpsO (30S ribosomal protein S15) 239468239737
infB 242378242695
rpmA (50S ribosomal protein L27) 260849261106
rplU (50S ribosomal protein L21) 261127261438
yrbI_S 270205270771
KP1_4921_S 270768271343
yhbN_S 271312271857
yhbG_S 271864272589
rpoN_S 272637274070
yhbH_S 274093274380
ptsN_S 274451274939
KP1_4927_S 274985275839
ptsO_S 275836276108
rpsI (30S ribosomal protein S9) 293890294282
rplM (50S ribosomal protein L13) 294298294726
5181733CXPD01000005.1298751dkgB_S 182985 EMBL GBK
yafC_S 10311936
KP1_1068_S 33254131
yafE_S 42234993
yafP_S 2558626038
pepD_S 2608127538
gpt_S 2779628254
frsA_S 2836029604
crl_S 2966230060
phoE 6846568884
KP1_1206_S 135431136333
KP1_1207_S 136600137241
KP1_1209_S 137428137973
KP1_1211_S 139925140791
KP1_1227_S 151553151918
KP1_1228_S 151942152637
tsx_S 152691153575
yajI_S 153874154413
nrdR_S 154561155010
thiJ_S 164981165580
apbA_S 165537166448
KP1_1246_S 166547167131
yajR_S 167175168539
KP1_1248_S 168699169877
KP1_1251_S 171584172402
tig_S 186856188154
clpP_S 188464189087
clpX_S 189338190612
lon_S 190688193150
hupB_S 193360193632
ppiD_S 193847195721
KP1_1275_S 195870196238
ptsG_S 224768225082
lacI_S 226761227831
rpmE2_S 227947228210
rpmE (50S ribosomal protein L31) 227947228210
rpmJ (50S ribosomal protein L36) 228210228350
adk_S 249706250350
hemH_S 250479251441
gsk_S 251505252809
ybaL_S 252845254521
fsr_S 254747255967
5181754CXPD01000015.1294583blaSHV (SHV beta-lactamase) 2797128828 EMBL GBK
KP1_2672_S 4064441588
KP1_2673_S 4173342215
yneJ_S 4216943047
yneI_S 4364444537
yneH_S 4461845544
KP1_2697_S 5983160502
KP1_2700_S 6210563133
KP1_2702_S 6370164012
KP1_2703_S 6418964944
5181713CXPD01000008.1250027KP1_1607_S 3328834085 EMBL GBK
pagP_S 3588936407
cspE_S 3651836811
KP1_1612_S 3687937262
ybeM_S 3735238140
tatE_S 3838338589
lipA_S 3878039745
ybeF_S 3992640930
KP1_1623_S 4768048147
KP1_1624_S 4815148468
nadD_S 4939350046
holA_S 5003651058
rlpB_S 5106751657
nagD_S 7267273424
nagC_S 7354174761
nagA_S 7477075918
nagB_S 7603276832
nagE_S 7714779102
glnS_S 7928180948
metH_S 8100381311
KP1_1656_S 8228882788
KP1_1657_S 8283683168
fur_S 8378584237
fldA_S 8452985128
KP1_1661_S 8521185573
ybfF_S 8563886411
KP1_1663_S 8645187143
cydA_S 119909121480
cydB_S 121496122635
KP1_1696_S 122767123057
KP1_1697_S 123207123611
tolQ_S 123608124300
tolR_S 124304124732
ybhA_S 145903146721
ybhE_S 146950147945
KP1_1726_S 148056148322
KP1_1727_S 148374148679
KP1_1728_S 148807149052
KP1_1729_S 149383150594
KP1_1730_S 150750151484
KP1_1731_S 151526152080
KP1_1732_S 152162152527
KP1_1734_S 153631154554
glnH_S 216465217211
dps_S 217620218123
ybiF_S 218361219248
ompX_S 219600220112
ybiP_S 220203221792
KP1_1803_S 222052222177
mntR_S 222363222836
ybiR_S 222833223945
5181719CXPD01000010.1222563rpsA (30S ribosomal protein S1) 1314614819 EMBL GBK
ihfB_S 1497115258
msbA_S 1776519513
KP1_1916_S 2054521774
ssuC_S 5113051921
ssuD_S 5193253077
ssuA_S 5307454036
ssuE_S 5402954604
pyrD_S 5482755864
KP1_2044_S 151183151920
ycdY_S 151943152497
ycdZ_S 152601153083
KP1_2047_S 153215153760
KP1_2048_S 153827154420
mdoC_S 154455155615
yceF_S 180978181562
KP1_2077_S 181704182225
rpmF (50S ribosomal protein L32) 182242182415
plsX_S 182619183716
fabH_S 183770184723
fabD_S 184739185668
fabG_S 185681186415
fabF_S 186952188193
pabC_S 188319189128
yceG_S 189130190152
tmk_S 190142190783
holB_S 190780191784
ycfH_S 191795192589
ptsG2_S 192886194319
KP1_2092_S 194581194937
ycfQ_S 203171203806
ycfS_S 204442205401
mfd_S 205565209011
ycfU_S 209307210515
ycfV_S 210508211209
ycfW_S 211209212453
5181738CXPD01000004.1214663yabF_S 1317513708 EMBL GBK
kefC_S 1370115566
folA_S 1574016219
apaH_S 1647117319
apaG_S 1732417701
ksgA_S 1770418525
pdxA_S 1852219511
araD_S 3540536100
araA_S 3623837740
araB_S 3775139460
araC_S 3979840643
yabI_S 4077241539
tbpA_S 4379744741
yabN_S 4507046725
KP1_0882_S 4680746965
setA_S 4723348417
gudP_S 4845149761
ilvI_S 6308164805
ilvH_S 6477865299
fruR_S 6548066484
KP1_0903_S 6708967583
mraW_S 6758668527
ftsL_S 6852468889
ftsI_S 6890570671
mutT_S 8864289034
yacG_S 8908789281
KP1_0925_S 8929190034
coaE_S 9003490654
KP1_0927_S 9081090941
guaC_S 9099892041
ppdD_S 9466995100
nadC_S 9528296175
ampD_S 9630996872
ampE_S 9686997723
KP1_0935_S 9795998909
KP1_0936_S 98909100315
lpdA_S 108210109637
KP1_0945_S 109802110086
KP1_0946_S 110132110947
hpt_S 125312125860
yadG_S 126767127693
yadH_S 127690128460
yadI_S 128583129023
KP1_0965_S 129088130335
folK_S 132622133101
yadB_S 134555135436
dksA_S 135496135969
sfsA_S 136114136830
map_S 180015180809
rpsB (30S ribosomal protein S2) 181132181857
tsf_S 181977182828
pyrH_S 182978183703
frr_S 183854184411
ispC_S 184640185842
5181752CXPD01000029.1203206rpsG (30S ribosomal protein S7) 24092879 EMBL GBK
rpsL (30S ribosomal protein S12) 29763350
yheS_S 1015812062
yheT_S 1226613288
KP1_5068_S 1328513503
prkB_S 1354014409
KP1_5070_S 1446414868
crp_S 1517515807
pabA_S 1923719800
KP1_5075_S 1983320435
KP1_5076_S 2042520592
ppiA_S 2069921268
yhfC_S 2154522732
nirD_S 2683027156
cysG_S 2731028683
trpS_S 2875629760
gph_S 2975330514
rpe_S 3050731184
dam_S 3120232029
aroB_S 3347634570
aroK_S 3462635147
glgA_S 7547976912
glgC_S 7691278207
glgX_S 7828880168
glgB_S 8026182447
asd_S 8268683840
pitA_S 141739143235
yhiO_S 143291143626
uspA_S 144009144446
yhiP_S 144703146175
KP1_5202_S 146303147112
prlC_S 147063149105
KP1_5210_S 156895157464
KP1_5213_S 159383160414
5181753CXPD01000030.1166107KP1_5258_S 1142912178 EMBL GBK
KP1_5259_S 1218213117
KP1_5260_S 1322214502
tkrA_S 1452715498
KP1_5262_S 1560716317
secB_S 5715257619
grxC_S 5768057931
yibN_S 5803658467
yibO_S 5863260257
KP1_5307_S 6026761538
KP1_5309_S 6154262489
rpmG (50S ribosomal protein L33) 8121181378
rpmB (50S ribosomal protein L28) 8139981635
sbp_S 111203112192
KP1_5367_S 112344112589
glpF_S 113032113883
glpK_S 113905115416
gltS_S 115531116361
yicE_S 117009118409
5181736CXPD01000016.1162725gst_S 8522685831 EMBL GBK
pdxY_S 8587486734
tyrS_S 8679688070
pdxH_S 8819588851
KP1_3049_S 8890989232
anmK_S 8932590422
ydhM_S 9849299091
nemA_S 99145100242
gloA_S 100321100728
KP1_3065_S 101561101908
ydhO_S 102249103121
5181743CXPD01000003.1150073yjjA_S 7469175182 EMBL GBK
dnaC_S 7524875985
dnaT_S 7598876527
yjjB_S 7663077118
yjjP_S 7709477870
KP1_0775_S 7814979333
KP1_0776_S 7935080231
fhuF_S 8404984837
ycdT_S 8494485990
mtr_S 8614186494
holD_S 8813888551
rimI_S 8852088966
yjjG_S 8898189658
prfC_S 8974991338
deoA_S 9720598527
deoB_S 9858099803
KP1_0801_S 99906100625
lplA_S 100706101722
smp_S 101722102369
serB_S 102453103445
sms_S 103455104837
nadR_S 104859106091
yjjK_S 106185107852
creB_S 113261113950
creC_S 113950115374
arcA_S 116856117572
lasT_S 118205118891
thrA_S 119211121715
thrB_S 121717122646
rpsT (30S ribosomal protein S20) 138085138348
5181725CXPD01000043.1134942yjaB_S 160621 EMBL GBK
metA_S 7781707
aceA_S 36344953
aceK_S 50566840
iclR_S 68917817
pgi 1986620297
KP1_0299_S 4921349629
KP1_0300_S 4963349989
uvrA_S 4999052815
ssb_S 5306753591
KP1_0375_S 123685124005
cbpA_S 123990124907
KP1_0378_S 125053125751
KP1_0379_S 125914126747
hmsS_S 126793127242
5181726CXPD01000045.1134297efp_S 59826548 EMBL GBK
ecnA_S 66226753
ecnB_S 69137059
sugE_S 72037520
blc_S 75178050
frdD_S 81648553
hfq_S 2971430022
hflX_S 3009831378
hflK_S 3144432706
hflC_S 3270933713
KP1_0445_S 3379634137
KP1_0446_S 3430934506
KP1_0467_S 5127051545
rpsF (30S ribosomal protein S6) 5188652281
priB_S 5243452601
rpsR (30S ribosomal protein S18) 5260652833
rplI (50S ribosomal protein L9) 5287553324
KP1_0513_S 9281793461
KP1_0514_S 9356794700
KP1_0515_S 9468495802
KP1_0516_S 9471195814
KP1_0517_S 9579996539
5181750CXPD01000020.1125832hscB_S 6363064145 EMBL GBK
iscA_S 6422064543
KP1_4113_S 6456164947
iscS_S 6497466188
iscR_S 6636766858
yfhQ_S 6709367827
suhB_S 6794868751
glyA_S 8144182694
hmpA_S 8302084210
KP1_4132_S 8428584623
yfhA_S 8468986026
yfhG_S 8601386720
yfhK_S 8672988177
nadB_S 106815108434
yfiC_S 108419109177
srmB_S 109288110619
yfiD_S 110665111048
ung_S 111361112050
5181741 CXPD01000006.1 112312
5181710CXPD01000001.1101005rpmH (50S ribosomal protein L34) 5124651386 EMBL GBK
atpF_S 7970780171
atpE_S 8022880467
atpB_S 8051781332
atpI_S 8134081792
gidB_S 8233782960
rbsC_S 9465095615
rbsB_S 9564396533
rbsK_S 9663797566
yieP_S 99969100670
5181737CXPD01000012.199265polA_S 46307422 EMBL GBK
engB_S 77708402
KP1_0026_S 89869492
hemN_S 968111054
glnG_S 1131112720
glnL_S 1272913778
glnA_S 1396715376
bipA_S 1575517578
rhaD_S 4720948039
rhaA_S 4818949454
rhaB_S 4944550911
rhaS_S 5122252058
rhaR_S 5213252977
rhaT_S 5301054044
sodA_S 5432854954
KP1_0077_S 5502755701
cpxA_S 5576957142
cpxR_S 5713957837
cpxP_S 5798758490
rpmE (50S ribosomal protein L31) 6899569207
yijC_S 9383594467
KP1_0118_S 9448394842
trmA_S 9489495994
KP1_0120_S 9619696318
btuB_S 9636198199
KP1_0122_S 9814498995
5181711 CXPD01000033.1 94282
5181717CXPD01000023.186532ilvM_S 53175574 EMBL GBK
ilvE_S 55916520
ilvD_S 65818431
ilvA_S 84919978
ilvY_S 997510949
cyaY_S 4620246522
KP1_0167_S 4666946872
dapF_S 4690547732
KP1_0169_S 4772948436
xerC_S 4843349335
yigB_S 4933550051
rhtB_S 5973760357
pldB_S 6046761459
KP1_0183_S 6150462304
yigM_S 6239363292
metR_S 6318064133
udp_S 6778968550
yigN_S 6868670134
ubiE_S 7020570960
KP1_0193_S 7097471579
ubiB_S 7157673216
tatA_S 7329873597
tatB_S 7360174137
tatC_S 7414074919
tatD_S 7496475755
rfaH_S 7575276240
ubiD_S 7641977894
fre_S 7794478645
fadA_S 7875279915
5181718CXPD01000009.173440potH_S 2329924252 EMBL GBK
potI_S 2420725094
KP1_1853_S 2515225640
KP1_1855_S 2688827604
hcr_S 4267143639
hcp_S 4365045302
ybjE_S 4544646345
5181746CXPD01000007.157465betA_S 63288037 EMBL GBK
betB_S 80069478
betT_S 1020812241
ykfE_S 1228712814
5181740CXPD01000046.156432KP1_0567_S 1134512169 EMBL GBK
KP1_0568_S 1218013067
KP1_0569_S 1305713941
yjgB_S 1407215091
5181748CXPD01000019.155904KP1_4022_S 2342424323 EMBL GBK
KP1_4023_S 2441824993
KP1_4024_S 2505525504
ypeA_S 2549125931
KP1_4027_S 2593826078
amiA_S 2612827000
hemF_S 2700027899
5181728 CXPD01000035.1 54196
5181714CXPD01000022.147220dsbC_S 1423114944 EMBL GBK
xerD_S 1496715863
fldB_S 1596416485
KP1_4612_S 1649216902
KP1_4613_S 1688317149
yqfA_S 1852919188
KP1_4617_S 1935219663
KP1_4618_S 1971320441
KP1_4629_S 3158032782
pepP_S 3396835284
KP1_4632_S 3530835892
KP1_4633_S 3605336382
yggE_S 4066241429
yggA_S 4151942154
yggB_S 4230643163
fbaA_S 4335444433
pgk_S 4453145694
epd_S 4573446762
5181721CXPD01000027.140649mdh 56656141 EMBL GBK
KP1_4977_S 2520325394
KP1_4978_S 2560826624
KP1_4979_S 2662427232
KP1_4980_S 2745627908
accB_S 2793128398
accC_S 2840929758
KP1_4984_S 2986930111
prmA_S 3156432445
KP1_4987_S 3241532645
5181745 CXPD01000014.1 37616
5181712CXPD01000042.134316rplK (50S ribosomal protein L11) 14901918 EMBL GBK
rplA (50S ribosomal protein L1) 19222626
rplJ (50S ribosomal protein L10) 30403537
rplL (50S ribosomal protein L7/L12) 36043969
rpoB 59506450
rsd_S 2268123178
nudC_S 2327224045
hemE_S 2408625150
nfi_S 2516325834
KP1_0239_S 2587726467
KP1_0241_S 2665426926
KP1_0242_S 2693327634
zraP_S 2763828075
5181724 CXPD01000032.1 34218
5181722CXPD01000013.128696KP1_2532_S 56175952 EMBL GBK
ydgB_S 59496671
ydgI_S 67088090
KP1_2535_S 82689218
KP1_2536_S 92159397
5181744CXPD01000028.126099yrdA_S 209763 EMBL GBK
KP1_4999_S 739996
aroE_S 9931811
yrdC_S 18152432
yrdD_S 23922934
KP1_5003_S 29613434
smf_S 34064530
def_S 46595168
KP1_5012_S 1012210490
rplQ (50S ribosomal protein L17) 1059910985
KP1_5015_S 1102612015
rpsD (30S ribosomal protein S4) 1204112661
rpsK (30S ribosomal protein S11) 1269513084
rpsM (30S ribosomal protein S13) 1310113457
rpmJ (50S ribosomal protein L36) 1360413720
secY_S 1375415085
rplO (50S ribosomal protein L15) 1509315527
rpmD (50S ribosomal protein L30) 1553115710
rpsE (30S ribosomal protein S5) 1571416217
rplR (50S ribosomal protein L18) 1623216585
rplF (50S ribosomal protein L6) 1659517128
rpsH (30S ribosomal protein S8) 1714117533
rpsN (30S ribosomal protein S14) 1756717872
rplE (50S ribosomal protein L5) 1788718426
rplX (50S ribosomal protein L24) 1844118755
rplN (50S ribosomal protein L14) 1876619137
rpsQ (30S ribosomal protein S17) 1930319557
rpmC (50S ribosomal protein L29) 1955719748
rplP (50S ribosomal protein L16) 1974820158
rpsC (30S ribosomal protein S3) 2017120869
rplV (50S ribosomal protein L22) 2088721219
rpsS (30S ribosomal protein S19) 2123421512
rplB (50S ribosomal protein L2) 2152922350
rplW (50S ribosomal protein L23) 2236822670
rplD (50S ribosomal protein L4) 2266723272
rplC (50S ribosomal protein L3) 2328323912
rpsJ (30S ribosomal protein S10) 2394524256
5181720 CXPD01000002.1 20678
5181727 CXPD01000044.1 14940
5181751 CXPD01000034.1 4554
5181716 CXPD01000036.1 3941
5181739 CXPD01000037.1 1813
5181715 CXPD01000038.1 1369
5181731 CXPD01000031.1 1159
5181723 CXPD01000026.1 1052
5181730 CXPD01000039.1 1037
5181735 CXPD01000025.1 788
5181732 CXPD01000040.1 677
5181729 CXPD01000041.1 567