Sequence bin for SB5375

Contig summary statistics

Contigs
58
Total length
5,554,336
Minimum length
252
Maximum length
777,552
Mean length
95,765
N50
270,995
L50
7
N90
63,341
L90
22
N95
45,893
L95
27

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
312809contig_0001777552KP1_2703_S 9473695491 EMBL GBK
KP1_2702_S 9566995980
KP1_2700_S 9654997577
KP1_2697_S 9918099851
yneH_S 114595115521
yneI_S 115603116496
yneJ_S 117095117973
KP1_2673_S 117927118409
marR 131770132204
marA 132221132598
blaLEN (LEN beta-lactamase) 152700153560
KP1_2536_S 256782256964
KP1_2535_S 256961257911
ydgI_S 258089259471
ydgB_S 259508260230
KP1_2532_S 260227260562
celC_S 586216586563
celA_S 588123588443
osmE_S 588722589060
nadE_S 589343590170
spy_S 591221591703
KP1_2225_S 620710621054
KP1_2224_S 621151621429
yeaA_S 621473621886
gapA 622467622916
KP1_2220_S 623294624178
yeaE_S 624234625118
312789contig_0002527269prfA_S 8259083672 EMBL GBK
hemK_S 8367284520
ychQ_S 8452084912
kdsA_S 8576886622
chaA_S 8671087810
chaB_S 8807488304
chaC_S 8844189121
tonB 141296141709
KP1_3291_S 142910143194
pfkB_S 143287144219
KP1_3289_S 144574145332
rpmI (50S ribosomal protein L35) 148840149037
rplT (50S ribosomal protein L20) 149088149444
ydhO_S 360487361359
KP1_3065_S 361700362047
gloA_S 362880363287
nemA_S 363366364463
ydhM_S 364517365116
anmK_S 373189374286
KP1_3049_S 374379374702
pdxH_S 374760375416
tyrS_S 375541376815
pdxY_S 376876377736
gst_S 377779378384
312820contig_0003406510dkgB_S 6721475 EMBL GBK
yafC_S 15212426
KP1_1068_S 38144620
yafE_S 47085478
yafP_S 2750127953
pepD_S 2799629453
gpt_S 2971130169
frsA_S 3027531519
crl_S 3157731975
phoE 6352163940
KP1_1206_S 130355131257
KP1_1207_S 131526132167
KP1_1209_S 132353132898
KP1_1211_S 134851135717
KP1_1227_S 146480146845
KP1_1228_S 146870147565
tsx_S 147608148492
yajI_S 148793149332
nrdR_S 149480149929
thiJ_S 159906160505
apbA_S 160462161373
KP1_1246_S 161498162082
yajR_S 162125163489
KP1_1248_S 163649164827
KP1_1251_S 166532167350
tig_S 181798183096
clpP_S 183406184029
clpX_S 184280185554
lon_S 185630188092
hupB_S 188302188574
ppiD_S 188789190663
KP1_1275_S 190812191180
ptsG_S 219703220017
lacI_S 221696222766
rpmE2_S 222883223146
rpmE (50S ribosomal protein L31) 222883223146
rpmJ (50S ribosomal protein L36) 223146223286
acrB 227942231088
acrA 231111232304
acrR 232447233097
adk_S 244652245296
hemH_S 245425246387
gsk_S 246451247755
ybaL_S 247791249467
fsr_S 249693250913
ramR 376954377535
ramA 378861379202
312781contig_0004364695ispC_S 2899530197 EMBL GBK
frr_S 3042530982
pyrH_S 3113331858
tsf_S 3200632857
rpsB (30S ribosomal protein S2) 3297733702
map_S 3402634820
sfsA_S 7811478830
dksA_S 7897579448
yadB_S 7950880389
folK_S 8184382322
KP1_0965_S 8460985856
yadI_S 8592186361
yadH_S 8648487254
yadG_S 8725188177
hpt_S 8908289630
KP1_0946_S 104206105021
KP1_0945_S 105066105350
lpdA_S 105515106942
KP1_0936_S 114833116239
KP1_0935_S 116239117189
ampE_S 117309118163
ampD_S 118160118723
nadC_S 118857119750
ppdD_S 119932120363
guaC_S 122991124034
KP1_0927_S 124091124222
coaE_S 124378124998
KP1_0925_S 124998125741
yacG_S 125751125945
mutT_S 125998126390
ftsI_S 144362146128
ftsL_S 146144146509
mraW_S 146506147447
KP1_0903_S 147450147944
fruR_S 148549149553
ilvH_S 149734150255
ilvI_S 150228151952
gudP_S 165274166584
setA_S 166629167813
KP1_0882_S 168085168243
yabN_S 168325169980
tbpA_S 170309171253
yabI_S 173511174278
araC_S 174407175252
araB_S 175589177298
araA_S 177309178811
araD_S 178949179644
pdxA_S 195477196466
ksgA_S 196463197284
apaG_S 197287197664
apaH_S 197669198517
folA_S 198810199289
kefC_S 199464201329
yabF_S 201322201855
rpsT (30S ribosomal protein S20) 223028223291
thrB_S 238495239424
thrA_S 239426241930
lasT_S 242250242936
arcA_S 243569244285
creC_S 245767247191
creB_S 247191247880
rob 248576249445
yjjK_S 253289254956
nadR_S 255132256364
sms_S 256386257768
serB_S 257778258770
smp_S 258854259501
lplA_S 259501260517
KP1_0801_S 260598261317
deoB_S 261420262643
deoA_S 262696264018
prfC_S 268468270057
yjjG_S 270148270825
rimI_S 270840271286
holD_S 271255271668
mtr_S 273315273668
ycdT_S 273819274865
fhuF_S 274977275765
KP1_0776_S 279577280458
KP1_0775_S 280475281659
yjjP_S 281941282717
yjjB_S 282693283181
dnaT_S 283284283823
dnaC_S 283826284563
yjjA_S 284629285123
KPNJ2_RS23430 348131348550
312813contig_0005326871yicE_S 18423242 EMBL GBK
gltS_S 38904720
glpK_S 48356346
glpF_S 63687219
KP1_5367_S 76627907
sbp_S 80599048
rpmB (50S ribosomal protein L28) 4010840344
rpmG (50S ribosomal protein L33) 4036540532
KP1_5309_S 5920160157
KP1_5307_S 6016161432
yibO_S 6144263067
yibN_S 6323263663
grxC_S 6376864019
secB_S 6408064547
KP1_5262_S 106740107450
tkrA_S 107559108530
KP1_5260_S 108555109835
KP1_5259_S 109940110875
KP1_5258_S 110879111628
KP1_5213_S 165840166871
KP1_5210_S 168780169349
prlC_S 177147179189
KP1_5202_S 179140179949
yhiP_S 180095181567
uspA_S 181824182261
yhiO_S 182644182979
pitA_S 183039184535
asd_S 242160243314
glgB_S 243553245739
glgX_S 245832247712
glgC_S 247793249088
glgA_S 249088250521
aroK_S 291678292199
aroB_S 292255293349
dam_S 294802295629
rpe_S 295647296324
gph_S 296317297078
trpS_S 297071298075
cysG_S 298150299523
nirD_S 299676300002
yhfC_S 304100305287
ppiA_S 305565306134
KP1_5076_S 306241306408
KP1_5075_S 306398307000
pabA_S 307033307596
crp_S 311027311659
KP1_5070_S 311966312370
prkB_S 312426313295
KP1_5068_S 313332313550
yheT_S 313547314569
yheS_S 314771316675
rpsL (30S ribosomal protein S12) 323486323860
rpsG (30S ribosomal protein S7) 323957324427
312786contig_0006283118KP1_4652_S 991110411 EMBL GBK
endA_S 1044911213
KP1_4654_S 1123012036
gshB_S 1205713007
KP1_4657_S 1318213745
yqgF_S 1374514161
parC 5326055515
parE 6030662198
KP1_4731_S 6654467215
ygiC_S 6722168381
ygiD_S 6842269213
ygiE_S 6940070170
ribB_S 7023170884
uppP_S 7978480605
folB_S 8080381189
KP1_4750_S 8129481911
ureD_S 8230983133
ureA_S 8314383445
ureB_S 8345583775
rpsU (30S ribosomal protein S21) 9030690521
KP1_4812_S 133410133910
ygjR_S 133984134973
ygjT_S 135245136216
ygjU_S 136448137695
KP1_4816_S 137711138265
KP1_4822_S 145009145392
KP1_4823_S 145542145910
KP1_4824_S 145956146261
KP1_4825_S 146264146662
KP1_4826_S 146659146955
KP1_4861_S 161533161919
yraO_S 161909162535
yraP_S 162545163120
KP1_4865_S 163242164282
yhbO_S 165005165670
KP1_4868_S 165632166075
KP1_4870_S 166402166905
KP1_4871_S 166899167423
yhbU_S 167645168640
yhbV_S 168631169524
yhbW_S 169668170675
rpsO (30S ribosomal protein S15) 177588177857
infB 180498180815
rpmA (50S ribosomal protein L27) 198976199233
rplU (50S ribosomal protein L21) 199254199565
yrbI_S 208330208896
KP1_4921_S 208893209468
yhbN_S 209437209982
yhbG_S 209989210714
rpoN_S 210762212195
yhbH_S 212218212505
ptsN_S 212576213064
KP1_4927_S 213110213964
ptsO_S 213961214233
rpsI (30S ribosomal protein S9) 232005232397
rplM (50S ribosomal protein L13) 232413232841
mdh 246500246976
KP1_4977_S 267375267566
KP1_4978_S 267780268796
KP1_4980_S 269628270080
accB_S 270103270570
accC_S 270581271930
KP1_4984_S 272041272283
prmA_S 273736274617
KP1_4987_S 274587274817
fis 275965276261
envR 276346276999
312805contig_0007270995pyrD_S 2523126268 EMBL GBK
ssuE_S 2649027065
ssuA_S 2705828020
ssuD_S 2801729162
ssuC_S 2917329964
KP1_1916_S 5332554554
msbA_S 5558657334
ihfB_S 5984160128
rpsA (30S ribosomal protein S1) 6028061953
ybjE_S 102600103499
hcp_S 103643105295
hcr_S 105306106274
KP1_1855_S 121349122065
KP1_1853_S 123313123801
potH_S 124701125654
ybiR_S 175811176923
mntR_S 176920177393
KP1_1803_S 177579177704
ybiP_S 177964179553
ompX_S 179644180159
ybiF_S 180511181398
dps_S 181636182139
glnH_S 182570183316
KP1_1734_S 246225247148
KP1_1732_S 248253248621
KP1_1731_S 248704249258
KP1_1730_S 249296250030
KP1_1729_S 250185251396
KP1_1728_S 251727251972
KP1_1727_S 252098252403
KP1_1726_S 252455252721
ybhE_S 252829253824
ybhA_S 254053254871
312794contig_0008226633mglA_S 2685528375 EMBL GBK
mglB_S 2849429492
galS_S 2978930811
folE_S 3214032808
yejE_S 6103862063
KP1_3844_S 6365864002
bcr_S 6433365529
rsuA_S 6552666245
KP1_3852_S 7092771562
KP1_3853_S 7160572366
yejK_S 7238673393
KP1_3855_S 7358073807
yejM_S 7382675586
gyrA 101154103784
nuoF_S 142934144271
nuoE_S 144268144768
nuoC_S 144771146579
nuoB_S 146667147341
nuoA_S 147357147803
yfcG_S 161843162472
folX_S 162538162900
accD_S 173914174897
dedA_S 175021175680
truA_S 175707176519
KP1_3958_S 176519177532
pdxB_S 177596178732
KP1_3960_S 178716178844
flk_S 178843179823
KP1_3965_S 189438189719
yfcM_S 189751190299
yfcA_S 190299191108
mepA_S 191108191932
aroC_S 191935193023
312827contig_0009226555yedI_S 9233393244 EMBL GBK
KP1_3554_S 9534095564
KP1_3553_S 9569595886
rcsA_S 9591996542
KP1_3551_S 9691797348
sdiA 102753103439
dapA4_S 109199110080
KP1_3538_S 110171110839
tyrP_S 110865112076
KP1_3536_S 112267112506
ftnA_S 112543113040
ruvA_S 139638140249
ruvB_S 140258141268
znuB_S 141332142117
znuC_S 142117142869
KP1_3501_S 143907145226
msbB_S 145344146315
purT_S 158679159857
yebG_S 159993160340
KP1_3490_S 160482161144
ptrB_S 161265163325
exoX_S 163329163988
holE_S 164067164297
KP1_3486_S 164402164785
KP1_3451_S 198244198588
yeaZ_S 200776201471
yeaY_S 201510202091
fadD_S 202297203982
minE_S 205257205526
minD_S 205530206342
minC_S 206366207067
KP1_3442_S 207155207475
ycgM_S 207492208151
KP1_3440_S 208246208692
312785contig_0010193046KP1_4281_S 108768110444 EMBL GBK
emrA_S 112135113307
emrR_S 113433113933
ygaH_S 114054114389
oqxR 157359157838
oqxB 157906161058
oqxA 161082162257
rarA 162588162953
smpB_S 166342166824
KP1_4197_S 166935167411
KP1_4196_S 167401167691
smpA_S 167761168102
ppnK_S 169998170876
grpE_S 171001171591
rpsP (30S ribosomal protein S16) 175644175892
rplS (50S ribosomal protein L19) 177298177645
312806contig_0011190173betA_S 67898498 EMBL GBK
betB_S 84679939
betT_S 1066912702
ykfE_S 1274913276
KP1_1607_S 9144092237
dcuC_S 9233093703
cspE_S 9467194964
KP1_1612_S 9503195414
ybeM_S 9550496292
tatE_S 9653796743
lipA_S 9694497909
ybeF_S 9809099094
KP1_1623_S 105853106320
KP1_1624_S 106324106641
nadD_S 107566108219
holA_S 108209109231
rlpB_S 109240109830
nagD_S 130846131598
nagC_S 131727132947
nagA_S 132956134104
nagB_S 134218135018
nagE_S 135334137289
glnS_S 137468139135
KP1_1656_S 140476140976
KP1_1657_S 141024141356
fur_S 146440146892
fldA_S 147184147783
KP1_1661_S 147866148228
ybfF_S 148293149066
cydA_S 180826182397
cydB_S 182413183552
KP1_1697_S 184246184650
tolQ_S 184647185339
tolR_S 185343185771
312829contig_0012182932epd_S 4621490 EMBL GBK
pgk_S 15302693
fbaA_S 27913870
yggB_S 40624919
yggA_S 50715706
yggE_S 57966563
KP1_4633_S 1113711466
KP1_4632_S 1162712211
pepP_S 1223513551
KP1_4629_S 1473715939
KP1_4618_S 2718727915
KP1_4617_S 2796628277
yqfA_S 2844129100
KP1_4613_S 3069330959
KP1_4612_S 3094031350
fldB_S 3135731878
xerD_S 3197932875
dsbC_S 3289833611
mrkA 7844979057
mrkB 7915379854
mrkC 7986682352
mrkD 8234383338
mrkF 8335283987
mrkJ 8402384739
mrkI 8488385467
mrkH 8547386177
KP1_4524_S 111701113101
KP1_4523_S 113109114536
KP1_4521_S 114604115377
KP1_4520_S 115374115853
galR_S 115814116830
ygdP_S 124659125189
ptsP_S 125202127448
lgt_S 127694128569
thyA_S 128576129370
ppdA_S 129643130110
argA_S 143758145089
amiC_S 145281146570
cobD_S 146588147664
pduX_S 147668148570
pduW_S 148626149840
KP1_4457_S 174517175242
KP1_4456_S 175239176024
KP1_4455_S 176035176829
KP1_4453_S 177536178273
KP1_4452_S 178275178556
cbiQ_S 178543179220
312795contig_0013176746ung_S 90809769 EMBL GBK
yfiD_S 1008110464
srmB_S 1051011841
yfiC_S 1195112709
nadB_S 1269414313
yfhK_S 3294934388
yfhG_S 3439735104
yfhA_S 3509136428
KP1_4132_S 3649436832
hmpA_S 3690738097
glyA_S 3842339676
suhB_S 4558246385
yfhQ_S 4650647240
iscR_S 4749347984
iscS_S 4816449378
KP1_4113_S 4940549791
iscA_S 4980950132
hscB_S 5020750722
hemF_S 153076153975
amiA_S 153975154847
KP1_4027_S 154897155037
ypeA_S 155044155484
KP1_4024_S 155471155920
KP1_4023_S 155982156557
KP1_4022_S 156652157551
312779contig_0014156717KP1_0517_S 3319233932 EMBL GBK
KP1_0516_S 3391735020
KP1_0515_S 3392935047
KP1_0514_S 3503136164
KP1_0513_S 3627836922
rplI (50S ribosomal protein L9) 8400984458
rpsR (30S ribosomal protein S18) 8450084727
priB_S 8473284899
rpsF (30S ribosomal protein S6) 8505285447
KP1_0467_S 8578986064
KP1_0446_S 102840103037
KP1_0445_S 103210103551
hflC_S 103634104638
hflK_S 104641105903
hflX_S 105969107249
hfq_S 107325107633
frdD_S 128806129195
blc_S 129309129842
sugE_S 129839130156
ecnB_S 130300130446
ecnA_S 130605130736
efp_S 130810131376
312823contig_0015124601hmsS_S 80608509 EMBL GBK
KP1_0379_S 85569389
KP1_0378_S 955110249
cbpA_S 1039511312
KP1_0375_S 1129711617
soxR 6073161189
soxS 6127461603
ssb_S 8369184218
uvrA_S 8447087295
KP1_0300_S 8729687652
KP1_0299_S 8765688072
pgi 113863114294
312791 contig_0016 100035
312777contig_001798474gyrB 3208434495 EMBL GBK
rpmH (50S ribosomal protein L34) 3887439014
atpF_S 7708877552
atpE_S 7760977848
atpB_S 7789778712
atpI_S 7872179173
gidB_S 7971880341
rbsC_S 9203192996
rbsB_S 9302493914
rbsK_S 9401894947
yieP_S 9735098051
312780contig_001895565polA_S 47907582 EMBL GBK
engB_S 79308562
KP1_0026_S 91479653
hemN_S 984211215
glnG_S 1147612885
glnL_S 1289413943
glnA_S 1413215541
bipA_S 1592017743
rhaD_S 4744148271
rhaA_S 4842349688
rhaB_S 4967951145
rhaS_S 5145652292
rhaR_S 5236653211
rhaT_S 5324454278
sodA_S 5456155187
KP1_0077_S 5526055934
cpxA_S 5599857371
cpxR_S 5736858066
cpxP_S 5821658719
rpmE (50S ribosomal protein L31) 6921969431
yijC_S 9025990891
KP1_0118_S 9090791266
trmA_S 9132092420
KP1_0120_S 9262292744
btuB_S 9278794625
KP1_0122_S 9457095421
312788contig_001994599KP1_2044_S 2313123868 EMBL GBK
ycdY_S 2389124445
ycdZ_S 2454925031
KP1_2047_S 2516625711
KP1_2048_S 2577826371
mdoC_S 2640627566
yceF_S 5296953553
KP1_2077_S 5369554216
rpmF (50S ribosomal protein L32) 5423354406
plsX_S 5461055707
fabH_S 5576256715
fabD_S 5673157660
fabG_S 5767358407
fabF_S 5894460185
pabC_S 6031161120
yceG_S 6112262144
tmk_S 6213462775
holB_S 6277263776
ycfH_S 6378764581
ptsG2_S 6487866311
KP1_2092_S 6657366929
ycfQ_S 7516175796
KP1_2104 (KP1_2104) 7604676300
ycfS_S 7643277388
mfd_S 7754680992
ycfU_S 8128882496
ycfV_S 8248983190
ycfW_S 8319084434
312814contig_002086436ilvM_S 53595616 EMBL GBK
ilvE_S 56366565
ilvD_S 66268476
ilvA_S 853610023
ilvY_S 1002010994
cyaY_S 4624946569
KP1_0167_S 4670846911
dapF_S 4694447771
KP1_0169_S 4776848475
xerC_S 4847249374
yigB_S 4937450090
rhtB_S 5979060410
pldB_S 6052061512
KP1_0183_S 6155762357
yigM_S 6244663345
metR_S 6323364186
udp_S 6782668587
yigN_S 6872370171
ubiE_S 7024270997
KP1_0193_S 7101171616
ubiB_S 7161373253
tatB_S 7363874174
tatC_S 7417774956
tatD_S 7500175792
rfaH_S 7578976277
fre_S 7798078681
fadA_S 7878679949
312800 contig_0021 66862
312778 contig_0022 63341
312816contig_002358935wzi (Wzi outer membrane protein of cps cluster) 89189364 EMBL GBK
312776 contig_0024 50792
312807contig_002548086kfuA 1135612372 EMBL GBK
kfuB 1239413968
kfuC 1397014998
312818 contig_0026 46335
312802 contig_0027 45893
312803contig_002834578zraP_S 64176854 EMBL GBK
KP1_0242_S 68587559
KP1_0241_S 75667838
KP1_0239_S 80258615
nfi_S 86589329
hemE_S 934210406
nudC_S 1044711220
rsd_S 1131411811
rpoB 2804328543
rplL (50S ribosomal protein L7/L12) 3052430889
rplJ (50S ribosomal protein L10) 3095631453
rplA (50S ribosomal protein L1) 3186732571
rplK (50S ribosomal protein L11) 3257533003
312825 contig_0029 31582
312796contig_003026370yrdA_S 399953 EMBL GBK
KP1_4999_S 9291186
aroE_S 11832001
yrdC_S 20052622
yrdD_S 25823124
KP1_5003_S 31513624
smf_S 35964720
def_S 48495358
KP1_5012_S 1031210680
rplQ (50S ribosomal protein L17) 1078911175
KP1_5015_S 1121612205
rpsD (30S ribosomal protein S4) 1223112851
rpsK (30S ribosomal protein S11) 1288513274
rpsM (30S ribosomal protein S13) 1329113647
rpmJ (50S ribosomal protein L36) 1379413910
secY_S 1394415275
rplO (50S ribosomal protein L15) 1528315717
rpmD (50S ribosomal protein L30) 1572115900
rpsE (30S ribosomal protein S5) 1590416407
rplR (50S ribosomal protein L18) 1642216775
rplF (50S ribosomal protein L6) 1678517318
rpsH (30S ribosomal protein S8) 1733117723
rpsN (30S ribosomal protein S14) 1775718062
rplE (50S ribosomal protein L5) 1807718616
rplX (50S ribosomal protein L24) 1863118945
rplN (50S ribosomal protein L14) 1895619327
rpsQ (30S ribosomal protein S17) 1949319747
rpmC (50S ribosomal protein L29) 1974719938
rplP (50S ribosomal protein L16) 1993820348
rpsC (30S ribosomal protein S3) 2036121059
rplV (50S ribosomal protein L22) 2107721409
rpsS (30S ribosomal protein S19) 2142421702
rplB (50S ribosomal protein L2) 2171922540
rplW (50S ribosomal protein L23) 2255822860
rplD (50S ribosomal protein L4) 2285723462
rplC (50S ribosomal protein L3) 2347324102
rpsJ (30S ribosomal protein S10) 2413524446
312824 contig_0031 24242
312801 contig_0032 24015
312826contig_003319447silR 1563716317 EMBL GBK
312810contig_003417982KP1_0567_S 1167112495 EMBL GBK
KP1_0568_S 1250613393
KP1_0569_S 1338314267
yjgB_S 1439815417
312817contig_003516393metA_S 7441673 EMBL GBK
aceB (KP1_0253) 19343532
aceA_S 36004919
aceK_S 50226806
iclR_S 68577783
312790 contig_0036 12223
312775 contig_0037 9262
312830 contig_0038 8756
312798 contig_0039 6479
312804 contig_0040 6182
312821 contig_0041 5004
312822 contig_0042 4518
312797 contig_0043 2933
312787 contig_0044 2742
312808 contig_0045 1996
312784 contig_0046 1953
312812 contig_0047 1728
312819 contig_0048 1373
312792 contig_0049 1025
312811 contig_0050 977
312815 contig_0051 661
312793 contig_0052 437
312783 contig_0053 304
312828 contig_0054 302
312774 contig_0055 298
312773 contig_0056 278
312799 contig_0057 278
312782 contig_0058 252