Sequence bin for ERR314466

Contig summary statistics

Contigs
30
Total length
5,244,261
Minimum length
533
Maximum length
624,947
Mean length
174,809
N50
485,446
L50
5
N90
142,202
L90
13
N95
66,473
L95
16

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
3139471NODE_1_length_624947_cov_20.834161624947KP1_2672_S 2949830442 EMBL GBK
KP1_2673_S 3058731069
yneJ_S 3102331901
yneI_S 3249833391
yneH_S 3347234398
KP1_2697_S 4859849269
KP1_2700_S 5087251900
KP1_2702_S 5246852779
KP1_2703_S 5295653711
gst_S 381906382511
pdxY_S 382554383414
tyrS_S 383476384750
pdxH_S 384875385531
KP1_3049_S 385589385912
anmK_S 386005387102
ydhM_S 395173395772
nemA_S 395826396923
gloA_S 397002397409
KP1_3065_S 398242398589
ydhO_S 398930399802
rplT (50S ribosomal protein L20) 594161594517
rpmI (50S ribosomal protein L35) 594568594765
KP1_3289_S 598269599027
pfkB_S 599384600316
KP1_3291_S 600411600695
tonB 601897602310
3139475NODE_2_length_581298_cov_26.632506581298tolR_S 46365064 EMBL GBK
tolQ_S 50685760
KP1_1697_S 57576161
KP1_1696_S 63116601
cydB_S 67337872
cydA_S 78889459
KP1_1663_S 4223242924
ybfF_S 4296443737
KP1_1661_S 4380244164
fldA_S 4424744846
fur_S 4513845590
KP1_1657_S 4620746539
KP1_1656_S 4658747087
metH_S 4806448372
glnS_S 4842750094
nagE_S 5027352228
nagB_S 5254353343
nagA_S 5345754605
nagC_S 5461455834
nagD_S 5595156703
rlpB_S 7791878508
holA_S 7851779539
nadD_S 7952980182
KP1_1624_S 8110781424
KP1_1623_S 8142881895
ybeF_S 8864589649
lipA_S 8983090795
tatE_S 9098691192
ybeM_S 9143592223
KP1_1612_S 9231392696
cspE_S 9276493057
pagP_S 9316893686
dcuC_S 9402595398
KP1_1607_S 9549196288
ykfE_S 173662174189
betT_S 174235176268
betB_S 176998178470
betA_S 178439180148
fsr_S 332354333574
ybaL_S 333800335476
gsk_S 335512336816
hemH_S 336880337842
adk_S 337971338615
rpmJ (50S ribosomal protein L36) 359983360123
rpmE2_S 360123360386
rpmE (50S ribosomal protein L31) 360123360386
lacI_S 360502361572
ptsG_S 363251363565
KP1_1275_S 392059392427
ppiD_S 392576394450
hupB_S 394665394937
lon_S 395147397609
clpX_S 397685398959
clpP_S 399210399833
tig_S 400143401441
KP1_1251_S 415893416711
KP1_1248_S 418418419596
yajR_S 419756421120
KP1_1246_S 421163421747
apbA_S 421846422757
thiJ_S 422714423313
nrdR_S 433284433733
yajI_S 433881434420
tsx_S 434719435603
KP1_1228_S 435658436353
KP1_1227_S 436377436742
KP1_1211_S 447504448370
KP1_1209_S 450322450867
KP1_1207_S 451054451695
KP1_1206_S 451962452864
phoE 518902519321
crl_S 550772551170
frsA_S 551228552472
gpt_S 552578553036
pepD_S 553294554751
yafP_S 554794555246
yafE_S 575929576699
KP1_1068_S 576791577597
yafC_S 578986579891
dkgB_S 579937580740
3139483NODE_3_length_541935_cov_23.120446541935folX_S 79378299 EMBL GBK
yfcG_S 83658994
yfcF_S 91759813
yfcD_S 1048511036
nuoA_S 2302823474
nuoB_S 2349024164
nuoC_S 2425126059
nuoE_S 2606226562
nuoF_S 2655927896
yejM_S 8935891118
KP1_3855_S 9113791364
yejK_S 9155192558
KP1_3853_S 9257893339
KP1_3852_S 9338394018
rsuA_S 9870099419
bcr_S 99416100612
KP1_3844_S 100944101288
yejE_S 102883103908
folE_S 129272129940
galS_S 131269132291
mglB_S 132588133586
mglA_S 133705135225
wzi (Wzi outer membrane protein of cps cluster) 227183227629
fyuA 331590333611
ybtE 333742335319
ybtT 335323336126
ybtU 336123337223
irp1 337220346711
irp2 346799352906
ybtA 353097354056
ybtA 353192354056
ybtP 354313356025
ybtQ 356012357814
ybtX 357807359087
ybtS 359115360419
yedI_S 385198386109
KP1_3554_S 388204388428
KP1_3553_S 388560388751
rcsA_S 388784389407
KP1_3551_S 389783390214
dapA4_S 400812401693
KP1_3538_S 401792402460
tyrP_S 402485403696
KP1_3536_S 403888404127
ftnA_S 404163404660
ruvA_S 431277431888
ruvB_S 431897432907
znuB_S 432971433756
znuC_S 433756434508
znuA_S 434461435531
KP1_3501_S 435547436866
msbB_S 436984437958
purT_S 445038446216
yebG_S 446361446708
KP1_3490_S 446848447507
ptrB_S 447628449688
exoX_S 449692450351
holE_S 450430450660
KP1_3486_S 450764451147
KP1_3451_S 485779486123
yeaZ_S 488311489006
yeaY_S 489045489626
fadD_S 489832491517
minE_S 492792493061
minD_S 493065493877
minC_S 493901494599
KP1_3442_S 494687495007
ycgM_S 495024495683
KP1_3440_S 495778496224
3139487NODE_4_length_501579_cov_29.183807501579yieP_S 4061107 EMBL GBK
rbsK_S 35104439
rbsB_S 45435433
rbsC_S 54616426
gidB_S 1811618739
atpI_S 1928419736
atpB_S 1974420559
atpE_S 2060920848
atpF_S 2090521369
rpmH (50S ribosomal protein L34) 7694077080
yicE_S 176686178086
gltS_S 178734179564
glpK_S 179679181190
glpF_S 181212182063
KP1_5367_S 182506182751
sbp_S 182903183892
rpmB (50S ribosomal protein L28) 214640214876
rpmG (50S ribosomal protein L33) 214897215064
KP1_5309_S 233788234744
KP1_5307_S 234748236019
yibO_S 236029237654
yibN_S 237819238250
grxC_S 238355238606
secB_S 238667239134
KP1_5262_S 281180281890
tkrA_S 281999282970
KP1_5260_S 282995284275
KP1_5259_S 284380285315
KP1_5258_S 285319286068
KP1_5213_S 340425341456
KP1_5210_S 343375343944
prlC_S 351734353776
yhiP_S 354664356136
uspA_S 356393356830
yhiO_S 357213357548
pitA_S 357604359100
asd_S 416875418029
glgB_S 418268420454
glgX_S 420547422427
glgC_S 422508423803
glgA_S 423803425236
aroK_S 466353466874
aroB_S 466930468024
dam_S 469474470301
rpe_S 470319470996
gph_S 470989471750
trpS_S 471743472747
cysG_S 472820474193
nirD_S 474347474673
yhfC_S 478771479958
ppiA_S 480235480804
KP1_5076_S 480911481078
KP1_5075_S 481068481670
pabA_S 481703482266
crp_S 485697486329
KP1_5070_S 486636487040
prkB_S 487095487964
KP1_5068_S 488001488219
yheT_S 488216489238
yheS_S 489442491346
rpsL (30S ribosomal protein S12) 498154498528
rpsG (30S ribosomal protein S7) 498625499095
3139477NODE_5_length_485446_cov_27.007864485446KP1_4987_S 79738203 EMBL GBK
prmA_S 81739054
KP1_4984_S 1050710749
accC_S 1086012209
accB_S 1222012687
KP1_4980_S 1271013162
KP1_4979_S 1338613994
KP1_4978_S 1399415010
KP1_4977_S 1522415415
mdh 3447734953
rplM (50S ribosomal protein L13) 4001740445
rpsI (30S ribosomal protein S9) 4046140853
ptsO_S 5863658908
KP1_4927_S 5890559759
ptsN_S 5980560293
yhbH_S 6036460651
rpoN_S 6067462107
yhbG_S 6215562880
yhbN_S 6288763432
KP1_4921_S 6340163976
yrbI_S 6397364539
rplU (50S ribosomal protein L21) 7330673617
rpmA (50S ribosomal protein L27) 7363873895
infB 9204292359
rpsO (30S ribosomal protein S15) 9500095269
yhbW_S 113365114372
yhbV_S 114516115409
yhbU_S 115400116395
KP1_4871_S 116617117141
KP1_4870_S 117135117638
KP1_4868_S 117965118408
yhbO_S 118370119035
KP1_4865_S 119758120798
yraP_S 120920121495
yraO_S 121505122131
KP1_4861_S 122121122507
KP1_4826_S 138059138355
KP1_4825_S 138352138750
KP1_4824_S 138753139058
KP1_4823_S 139104139472
KP1_4822_S 139622140005
KP1_4816_S 146745147299
ygjU_S 147315148562
ygjT_S 148829149800
ygjR_S 150072151061
KP1_4812_S 151135151635
rpsU (30S ribosomal protein S21) 197465197680
ureB_S 204221204541
ureA_S 204551204853
ureD_S 204863205687
KP1_4750_S 206085206702
folB_S 206807207193
uppP_S 207392208213
ribB_S 217113217766
ygiE_S 217828218598
ygiD_S 218785219576
ygiC_S 219621220781
KP1_4731_S 220787221458
yqgF_S 277184277600
KP1_4657_S 277600278163
gshB_S 278338279288
KP1_4654_S 279309280115
endA_S 280132280896
KP1_4652_S 280934281434
epd_S 308101309129
pgk_S 309169310332
fbaA_S 310430311509
yggB_S 311700312557
yggA_S 312709313344
yggE_S 313434314201
KP1_4633_S 318481318810
KP1_4632_S 318971319555
pepP_S 319579320895
KP1_4629_S 322081323283
KP1_4618_S 334422335150
KP1_4617_S 335200335511
yqfA_S 335675336334
KP1_4613_S 337714337980
KP1_4612_S 337961338371
fldB_S 338378338899
xerD_S 339000339896
dsbC_S 339919340632
KP1_4524_S 413779415179
KP1_4523_S 415187416614
KP1_4521_S 416682417455
KP1_4520_S 417452417931
galR_S 417892418908
ygdP_S 426737427267
ptsP_S 427280429526
lgt_S 429772430647
thyA_S 430654431448
ppdA_S 431719432186
argA_S 445829447160
amiC_S 447352448641
cobD_S 448659449735
pduX_S 449739450641
pduW_S 450697451911
KP1_4457_S 476583477308
KP1_4456_S 477305478090
KP1_4455_S 478101478895
KP1_4453_S 479602480339
KP1_4452_S 480341480622
cbiQ_S 480609481286
3139470NODE_6_length_450281_cov_21.754861450281ybhA_S 1609616914 EMBL GBK
ybhE_S 1714318138
KP1_1726_S 1824918515
KP1_1727_S 1856718872
KP1_1728_S 1900019245
KP1_1729_S 1957520786
KP1_1730_S 2094221676
KP1_1731_S 2171822272
KP1_1732_S 2235422719
KP1_1734_S 2382424747
glnH_S 8744588191
dps_S 8860089103
ybiF_S 8934190228
ompX_S 9058091092
ybiP_S 9118392772
KP1_1803_S 9303293157
mntR_S 9334393816
ybiR_S 9381394925
potH_S 144215145168
potI_S 145123146010
KP1_1853_S 146068146556
KP1_1855_S 147804148520
hcr_S 163590164558
hcp_S 164569166221
ybjE_S 166365167264
rpsA (30S ribosomal protein S1) 207847209520
ihfB_S 209672209959
msbA_S 212466214214
KP1_1916_S 215246216475
ssuC_S 245831246622
ssuD_S 246633247778
ssuA_S 247775248737
ssuE_S 248730249305
pyrD_S 249528250565
KP1_2044_S 328164328901
ycdY_S 328924329478
ycdZ_S 329582330064
KP1_2047_S 330196330741
KP1_2048_S 330808331401
mdoC_S 331436332596
yceF_S 357961358545
KP1_2077_S 358687359208
rpmF (50S ribosomal protein L32) 359225359398
plsX_S 359602360699
fabH_S 360753361706
fabD_S 361722362651
fabG_S 362664363398
fabF_S 363935365176
pabC_S 365302366111
yceG_S 366113367135
tmk_S 367125367766
holB_S 367763368767
ycfH_S 368778369572
ptsG2_S 369869371302
KP1_2092_S 371564371920
ycfQ_S 380154380789
ycfS_S 381425382384
mfd_S 382548385994
ycfU_S 386290387498
ycfV_S 387491388192
ycfW_S 388192389436
3139497NODE_7_length_348327_cov_26.366370348327ispC_S 2889830100 EMBL GBK
frr_S 3032930886
pyrH_S 3103731762
tsf_S 3191332764
rpsB (30S ribosomal protein S2) 3288433609
map_S 3393234726
sfsA_S 7793178647
dksA_S 7879279265
yadB_S 7932580206
folK_S 8166082139
KP1_0965_S 8442685673
yadI_S 8573886178
yadH_S 8630187071
yadG_S 8706887994
hpt_S 8890189449
KP1_0946_S 103979104794
KP1_0945_S 104840105124
lpdA_S 105289106716
KP1_0936_S 114611116017
KP1_0935_S 116017116967
ampE_S 117203118057
ampD_S 118054118617
nadC_S 118751119644
ppdD_S 119826120257
guaC_S 122885123928
KP1_0927_S 123985124116
coaE_S 124272124892
KP1_0925_S 124892125635
yacG_S 125645125839
mutT_S 125892126284
ftsI_S 144255146021
ftsL_S 146037146402
mraW_S 146399147340
KP1_0903_S 147343147837
fruR_S 148442149446
ilvH_S 149627150148
ilvI_S 150121151845
gudP_S 165166166476
setA_S 166510167694
KP1_0882_S 167962168120
yabN_S 168202169857
tbpA_S 170186171130
yabI_S 173388174155
araC_S 174284175129
araB_S 175466177175
araA_S 177186178688
araD_S 178826179521
pdxA_S 195415196404
ksgA_S 196401197222
apaG_S 197225197602
apaH_S 197607198455
folA_S 198708199187
kefC_S 199361201226
yabF_S 201219201752
rpsT (30S ribosomal protein S20) 217519217782
thrB_S 233221234150
thrA_S 234152236656
lasT_S 236976237662
arcA_S 238293239009
creC_S 240491241915
creB_S 241915242604
yjjK_S 248013249680
nadR_S 249774251006
sms_S 251028252410
serB_S 252420253412
smp_S 253496254143
lplA_S 254143255159
KP1_0801_S 255240255959
deoB_S 256062257285
deoA_S 257338258660
prfC_S 264527266116
yjjG_S 266207266884
rimI_S 266899267345
holD_S 267314267727
mtr_S 269299269652
ycdT_S 269803270849
fhuF_S 270956271744
KP1_0776_S 275562276443
KP1_0775_S 276460277644
yjjP_S 277924278700
yjjB_S 278676279164
dnaT_S 279267279806
dnaC_S 279809280546
yjjA_S 280612281103
3139491NODE_8_length_310709_cov_25.414581310709KP1_4281_S 170393172069 EMBL GBK
emrA_S 173760174932
emrR_S 175058175558
ygaH_S 175679176014
smpB_S 284082284564
KP1_4197_S 284675285151
KP1_4196_S 285141285431
smpA_S 285498285839
ppnK_S 287735288613
grpE_S 288738289328
rpsP (30S ribosomal protein S16) 293333293581
rplS (50S ribosomal protein L19) 294987295334
3139469NODE_9_length_237450_cov_20.070222237450KP1_2536_S 109423109605 EMBL GBK
KP1_2535_S 109602110552
ydgI_S 110730112112
ydgB_S 112149112871
KP1_2532_S 112868113203
3139476NODE_10_length_182243_cov_28.732598182243yjgB_S 5043751456 EMBL GBK
KP1_0569_S 5158752471
KP1_0568_S 5246153348
KP1_0567_S 5335954183
KP1_0517_S 109093109833
KP1_0516_S 109818110921
KP1_0515_S 109830110948
KP1_0514_S 110932112065
KP1_0513_S 112171112815
rplI (50S ribosomal protein L9) 150894151343
rpsR (30S ribosomal protein S18) 151385151612
priB_S 151617151784
rpsF (30S ribosomal protein S6) 151937152332
KP1_0467_S 152673152948
KP1_0446_S 169712169909
KP1_0445_S 170081170422
hflC_S 170505171509
hflK_S 171512172774
hflX_S 172840174120
hfq_S 174196174504
3139494NODE_11_length_172463_cov_22.772502172463ung_S 88809569 EMBL GBK
yfiD_S 988210265
srmB_S 1031111636
yfiC_S 1174712505
nadB_S 1249014109
yfhK_S 3274634185
yfhG_S 3419434901
yfhA_S 3488836225
KP1_4132_S 3629136629
hmpA_S 3670437894
glyA_S 3822039473
suhB_S 5215852961
yfhQ_S 5308253816
iscR_S 5405154542
iscS_S 5472155935
KP1_4113_S 5596256348
iscA_S 5636656689
hscB_S 5676457279
hemF_S 148731149630
amiA_S 149630150502
KP1_4027_S 150552150692
ypeA_S 150699151139
KP1_4024_S 151126151575
KP1_4023_S 151637152212
KP1_4022_S 152307153206
3139485NODE_12_length_169014_cov_20.719301169014yeaE_S 2001920903 EMBL GBK
KP1_2220_S 2096021844
gapA 2222222671
yeaA_S 2325323666
KP1_2224_S 2371023988
KP1_2225_S 2408324427
spy_S 5345653938
nadE_S 5499055817
osmE_S 5610056438
celA_S 5671757037
celC_S 5859758944
3139478NODE_13_length_142202_cov_28.703779142202yjaB_S 232693 EMBL GBK
metA_S 8501779
aceA_S 37065025
aceK_S 51286912
iclR_S 69637889
pgi 2591626347
KP1_0299_S 5527155687
KP1_0300_S 5569156047
uvrA_S 5604858873
ssb_S 5912559649
KP1_0375_S 130402130722
cbpA_S 130707131624
KP1_0378_S 131770132468
KP1_0379_S 132631133464
hmsS_S 133510133959
3139498NODE_14_length_94153_cov_28.31472894153polA_S 46817473 EMBL GBK
engB_S 78218453
KP1_0026_S 90379543
hemN_S 973211105
glnG_S 1136212771
glnL_S 1278013829
glnA_S 1401815427
bipA_S 1580617629
rhaD_S 4204642876
rhaA_S 4302644291
rhaB_S 4428245748
rhaS_S 4605946895
rhaR_S 4696947814
rhaT_S 4784748881
sodA_S 4916549791
KP1_0077_S 4986450538
cpxA_S 5060651979
cpxR_S 5197652674
cpxP_S 5282453327
rpmE (50S ribosomal protein L31) 6383264044
yijC_S 8867189303
KP1_0118_S 8931989678
trmA_S 8973090830
KP1_0120_S 9103291154
btuB_S 9119793035
KP1_0122_S 9298093831
3139488NODE_15_length_86457_cov_27.58829486457fadA_S 64917654 EMBL GBK
fre_S 77618462
ubiD_S 85129987
rfaH_S 1016610654
tatD_S 1065111442
tatC_S 1148712266
tatB_S 1226912805
tatA_S 1280913108
ubiB_S 1319014830
KP1_0193_S 1482715432
ubiE_S 1544616201
yigN_S 1627217720
udp_S 1785618617
metR_S 2227323226
yigM_S 2311424013
KP1_0183_S 2410224902
pldB_S 2494725939
rhtB_S 2604926669
yigB_S 3635637072
xerC_S 3707237974
KP1_0169_S 3797138678
dapF_S 3867539502
KP1_0167_S 3953539738
cyaY_S 3988540205
ilvY_S 7545876432
ilvA_S 7642977916
ilvD_S 7797679826
ilvE_S 7988780816
ilvM_S 8083381090
3139489NODE_16_length_66473_cov_21.27696666473chaC_S 2668827368 EMBL GBK
chaB_S 2750527735
chaA_S 2799929099
kdsA_S 2918630040
ychQ_S 3089631288
hemK_S 3128832136
prfA_S 3213633218
3139481 NODE_17_length_63717_cov_16.719352 63717
3139486NODE_18_length_55576_cov_23.92128155576accD_S 75908573 EMBL GBK
dedA_S 86969355
truA_S 938210194
KP1_3958_S 1019411207
pdxB_S 1127112407
KP1_3960_S 1239112519
flk_S 1251813495
KP1_3965_S 1839618677
yfcM_S 1870919257
yfcA_S 1925720066
mepA_S 2006620890
aroC_S 2089321981
3139482NODE_19_length_44414_cov_28.14132044414frdD_S 1320213591 EMBL GBK
blc_S 1370514238
sugE_S 1423514552
ecnB_S 1469614842
ecnA_S 1500215133
efp_S 1520715773
3139496NODE_20_length_35018_cov_28.50831435018rplK (50S ribosomal protein L11) 21812609 EMBL GBK
rplA (50S ribosomal protein L1) 26133317
rplJ (50S ribosomal protein L10) 36654162
rplL (50S ribosomal protein L7/L12) 42294594
rpoB 65757075
rsd_S 2330623803
nudC_S 2389724670
hemE_S 2471125775
nfi_S 2578826459
KP1_0239_S 2650227092
KP1_0241_S 2727927551
KP1_0242_S 2755828259
zraP_S 2826328700
3139484NODE_21_length_26274_cov_28.00190826274yrdA_S 275829 EMBL GBK
KP1_4999_S 8051062
aroE_S 10591877
yrdC_S 18812498
yrdD_S 24583000
KP1_5003_S 30273500
smf_S 34724596
def_S 47255234
KP1_5012_S 1018810556
rplQ (50S ribosomal protein L17) 1066511051
KP1_5015_S 1109212081
rpsD (30S ribosomal protein S4) 1210712727
rpsK (30S ribosomal protein S11) 1276113150
rpsM (30S ribosomal protein S13) 1316713523
rpmJ (50S ribosomal protein L36) 1367013786
secY_S 1382015151
rplO (50S ribosomal protein L15) 1515915593
rpmD (50S ribosomal protein L30) 1559715776
rpsE (30S ribosomal protein S5) 1578016283
rplR (50S ribosomal protein L18) 1629816651
rplF (50S ribosomal protein L6) 1666117194
rpsH (30S ribosomal protein S8) 1720717599
rpsN (30S ribosomal protein S14) 1763317938
rplE (50S ribosomal protein L5) 1795318492
rplX (50S ribosomal protein L24) 1850718821
rplN (50S ribosomal protein L14) 1883219203
rpsQ (30S ribosomal protein S17) 1936919623
rpmC (50S ribosomal protein L29) 1962319814
rplP (50S ribosomal protein L16) 1981420224
rpsC (30S ribosomal protein S3) 2023720935
rplV (50S ribosomal protein L22) 2095321285
rpsS (30S ribosomal protein S19) 2130021578
rplB (50S ribosomal protein L2) 2159522416
rplW (50S ribosomal protein L23) 2243422736
rplD (50S ribosomal protein L4) 2273323338
rplC (50S ribosomal protein L3) 2334923978
rpsJ (30S ribosomal protein S10) 2401124322
3139480 NODE_22_length_6275_cov_86.497903 6275
3139492 NODE_23_length_4895_cov_16.090456 4895
3139473 NODE_24_length_4128_cov_29.261535 4128
3139490 NODE_25_length_3554_cov_106.983329 3554
3139472 NODE_26_length_2572_cov_230.698438 2572
3139493 NODE_27_length_1189_cov_25.938061 1189
3139495 NODE_28_length_600_cov_230.426667 600
3139479 NODE_29_length_539_cov_89.099138 539
3139474 NODE_30_length_533_cov_216.174672 533