Sequence bin for T7-405

Contig summary statistics

Contigs
79
Total length
5,720,272
Minimum length
204
Maximum length
708,039
Mean length
72,409
N50
419,865
L50
6
N90
86,820
L90
16
N95
34,261
L95
21

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
16028561708039blaSHV (SHV beta-lactamase) 2785328710 EMBL GBK
KP1_2672_S 6051561459
KP1_2673_S 6160462086
yneJ_S 6204062918
yneI_S 6351564408
yneH_S 6448965415
KP1_2697_S 7970280373
KP1_2700_S 8197683004
KP1_2702_S 8357283883
KP1_2703_S 8406084815
gst_S 410494411099
pdxY_S 411142412002
tyrS_S 412064413338
pdxH_S 413463414119
KP1_3049_S 414177414500
anmK_S 414593415690
ydhM_S 423760424359
nemA_S 424413425510
gloA_S 425589425996
KP1_3065_S 426829427176
ydhO_S 427517428389
rplT (50S ribosomal protein L20) 616222616578
rpmI (50S ribosomal protein L35) 616629616826
KP1_3289_S 620330621088
pfkB_S 621445622377
KP1_3291_S 622472622756
tonB 623958624371
chaC_S 673840674520
chaB_S 674657674887
chaA_S 675151676251
kdsA_S 676338677192
ychQ_S 678048678440
hemK_S 678440679288
prfA_S 679288680370
16028542530013betA_S 154945156654 EMBL GBK
betB_S 156623158095
betT_S 158825160858
ykfE_S 160904161431
KP1_1607_S 238693239490
dcuC_S 239583240956
pagP_S 241295241813
cspE_S 241924242217
KP1_1612_S 242285242668
ybeM_S 242758243546
tatE_S 243789243995
lipA_S 244186245151
ybeF_S 245332246336
KP1_1623_S 253086253553
KP1_1624_S 253557253874
nadD_S 254799255452
holA_S 255442256464
rlpB_S 256473257063
nagD_S 278077278829
nagC_S 278946280166
nagA_S 280175281323
nagB_S 281437282237
nagE_S 282552284507
glnS_S 284686286353
metH_S 286407286715
KP1_1656_S 287692288192
KP1_1657_S 288240288572
fur_S 289189289641
fldA_S 289933290532
KP1_1661_S 290615290977
ybfF_S 291042291815
KP1_1663_S 291855292547
cydA_S 325322326893
cydB_S 326909328048
KP1_1696_S 328180328470
KP1_1697_S 328620329024
tolQ_S 329021329713
tolR_S 329717330145
ybhA_S 351371352189
ybhE_S 352418353413
KP1_1726_S 353524353790
KP1_1727_S 353842354147
KP1_1728_S 354275354520
KP1_1729_S 354851356062
KP1_1730_S 356218356952
KP1_1731_S 356994357548
KP1_1732_S 357630357995
KP1_1734_S 359100360023
glnH_S 422802423548
dps_S 423957424460
ybiF_S 424698425585
ompX_S 425937426449
ybiP_S 426540428129
KP1_1803_S 428389428514
mntR_S 428700429173
ybiR_S 429170430282
potH_S 480089481042
potI_S 480997481884
KP1_1853_S 481942482430
KP1_1855_S 483678484394
hcr_S 499465500433
hcp_S 500444502096
ybjE_S 502240503139
16028753472294rpsG (30S ribosomal protein S7) 23682838 EMBL GBK
rpsL (30S ribosomal protein S12) 29353309
yheS_S 1011712021
yheT_S 1222513247
KP1_5068_S 1324413462
prkB_S 1349914368
KP1_5070_S 1442314827
crp_S 1513415766
pabA_S 1919719760
KP1_5075_S 1979320395
KP1_5076_S 2038520552
ppiA_S 2065921228
yhfC_S 2150522692
nirD_S 2679027116
cysG_S 2727028643
trpS_S 2871629720
gph_S 2971330474
rpe_S 3046731144
dam_S 3116231989
aroB_S 3343934533
aroK_S 3458935110
glgA_S 7621877651
glgC_S 7765178946
glgX_S 7902780907
glgB_S 8100083186
asd_S 8342584579
pitA_S 142007143503
yhiO_S 143559143894
uspA_S 144277144714
yhiP_S 144972146444
KP1_5202_S 146572147381
prlC_S 147332149374
KP1_5210_S 157163157732
KP1_5213_S 159651160682
KP1_5258_S 214958215707
KP1_5259_S 215711216646
KP1_5260_S 216751218031
tkrA_S 218056219027
KP1_5262_S 219135219845
secB_S 260695261162
grxC_S 261223261474
yibN_S 261579262010
yibO_S 262175263800
KP1_5307_S 263810265081
KP1_5309_S 265085266041
rpmG (50S ribosomal protein L33) 284763284930
rpmB (50S ribosomal protein L28) 284951285187
sbp_S 315935316924
KP1_5367_S 317076317321
glpF_S 317764318615
glpK_S 318637320148
gltS_S 320263321093
yicE_S 321741323141
rpmH (50S ribosomal protein L34) 422806422946
atpF_S 451198451662
atpE_S 451719451958
atpB_S 452008452823
atpI_S 452831453283
gidB_S 453828454451
rbsC_S 466141467106
rbsB_S 467134468024
rbsK_S 468128469057
yieP_S 471460472161
16028824455701wzi (Wzi outer membrane protein of cps cluster) 62286674 EMBL GBK
mglA_S 9692398443
mglB_S 9856299560
galS_S 99857100879
folE_S 102208102876
yejE_S 128242129267
KP1_3844_S 130862131206
bcr_S 131538132734
rsuA_S 132731133450
KP1_3852_S 138132138767
KP1_3853_S 138811139572
yejK_S 139592140599
KP1_3855_S 140786141013
yejM_S 141032142792
nuoF_S 204251205588
nuoE_S 205585206085
nuoC_S 206088207896
nuoB_S 207983208657
nuoA_S 208673209119
yfcD_S 221111221662
yfcF_S 222334222972
yfcG_S 223153223782
folX_S 223848224210
accD_S 235215236198
dedA_S 236321236980
truA_S 237007237819
KP1_3958_S 237819238832
pdxB_S 238896240032
KP1_3960_S 240016240144
flk_S 240143241120
KP1_3965_S 246021246302
yfcM_S 246334246882
yfcA_S 246882247691
mepA_S 247691248515
aroC_S 248518249606
KP1_4022_S 302525303424
KP1_4023_S 303519304094
KP1_4024_S 304156304605
ypeA_S 304592305032
KP1_4027_S 305039305179
amiA_S 305229306101
hemF_S 306101307000
hscB_S 398594399109
iscA_S 399184399507
KP1_4113_S 399525399911
iscS_S 399938401152
iscR_S 401331401822
yfhQ_S 402057402791
suhB_S 402912403715
glyA_S 416400417653
hmpA_S 417979419169
KP1_4132_S 419244419582
yfhA_S 419648420985
yfhG_S 420972421679
yfhK_S 421688423127
nadB_S 441764443383
yfiC_S 443368444126
srmB_S 444237445568
yfiD_S 445614445997
ung_S 446310446999
16028865449095rplS (50S ribosomal protein L19) 1533215679 EMBL GBK
rpsP (30S ribosomal protein S16) 1708517333
grpE_S 2133821928
ppnK_S 2205322931
smpA_S 2482725168
KP1_4196_S 2523525525
KP1_4197_S 2551525991
smpB_S 2610226584
ygaH_S 107757108092
emrR_S 108213108713
emrA_S 108839110011
KP1_4281_S 111702113378
cbiQ_S 275428276105
KP1_4452_S 276092276373
KP1_4453_S 276375277112
KP1_4455_S 277819278613
KP1_4456_S 278624279409
KP1_4457_S 279406280131
pduW_S 304802306016
pduX_S 306072306974
cobD_S 306978308054
amiC_S 308072309361
argA_S 309553310884
ppdA_S 324528324995
thyA_S 325266326060
lgt_S 326067326942
ptsP_S 327188329434
ygdP_S 329447329977
galR_S 337806338822
KP1_4520_S 338783339262
KP1_4521_S 339259340032
KP1_4523_S 340100341527
KP1_4524_S 341535342935
mrkH 368449369153
mrkI 369159369743
mrkJ 369887370603
mrkF 370638371273
mrkD 371287372282
mrkB 374771375472
mrkA 375568376176
dsbC_S 416072416785
xerD_S 416808417704
fldB_S 417805418326
KP1_4612_S 418333418743
KP1_4613_S 418724418990
yqfA_S 420370421029
KP1_4617_S 421193421504
KP1_4618_S 421554422282
KP1_4629_S 433421434623
pepP_S 435809437125
KP1_4632_S 437149437733
KP1_4633_S 437894438223
yggE_S 442503443270
yggA_S 443360443995
yggB_S 444147445004
fbaA_S 445195446274
pgk_S 446372447535
epd_S 447575448603
16028746419865KP1_2536_S 80168198 EMBL GBK
KP1_2535_S 81959145
ydgI_S 932310705
ydgB_S 1074211464
KP1_2532_S 1146111796
celC_S 262410262757
celA_S 264317264637
osmE_S 264916265254
nadE_S 265537266364
spy_S 267416267898
KP1_2225_S 296930297274
KP1_2224_S 297369297647
yeaA_S 297691298104
gapA 298686299135
KP1_2220_S 299513300397
yeaE_S 300454301338
16028137364308yjaB_S 112573 EMBL GBK
metA_S 7301659
aceA_S 35864905
aceK_S 50086792
iclR_S 68437769
pgi 1981820249
KP1_0299_S 4916649582
KP1_0300_S 4958649942
uvrA_S 4994352768
ssb_S 5302053544
KP1_0375_S 115901116221
cbpA_S 116206117123
KP1_0378_S 117269117967
KP1_0379_S 118130118963
hmsS_S 119009119458
efp_S 153553154119
ecnA_S 154193154324
ecnB_S 154484154630
sugE_S 154774155091
blc_S 155088155621
frdD_S 155735156124
hfq_S 177285177593
hflX_S 177669178949
hflK_S 179015180277
hflC_S 180280181284
KP1_0445_S 181367181708
KP1_0446_S 181880182077
KP1_0467_S 198840199115
rpsF (30S ribosomal protein S6) 199456199851
priB_S 200004200171
rpsR (30S ribosomal protein S18) 200176200403
rplI (50S ribosomal protein L9) 200445200894
KP1_0513_S 240383241027
KP1_0514_S 241133242266
KP1_0515_S 242250243368
KP1_0516_S 242277243380
KP1_0517_S 243365244105
KP1_0567_S 300028300852
KP1_0568_S 300863301750
KP1_0569_S 301740302624
yjgB_S 302755303774
silR 359809360489
16028808363422yjjA_S 8225082741 EMBL GBK
dnaC_S 8280783544
dnaT_S 8354784086
yjjB_S 8418984677
yjjP_S 8465385429
KP1_0775_S 8570986893
KP1_0776_S 8691087791
fhuF_S 9160992397
ycdT_S 9250493550
mtr_S 9370194054
holD_S 9569896111
rimI_S 9608096526
yjjG_S 9654197218
prfC_S 9730998898
deoA_S 104765106087
deoB_S 106140107363
KP1_0801_S 107466108185
lplA_S 108266109282
smp_S 109282109929
serB_S 110013111005
sms_S 111015112397
nadR_S 112419113651
yjjK_S 113745115412
creB_S 120822121511
creC_S 121511122935
arcA_S 124417125133
lasT_S 125766126452
thrA_S 126772129276
thrB_S 129278130207
rpsT (30S ribosomal protein S20) 145646145909
yabF_S 161529162062
kefC_S 162055163920
folA_S 164094164573
apaH_S 164996165844
apaG_S 165849166226
ksgA_S 166229167050
pdxA_S 167047168036
araD_S 183930184625
araA_S 184763186265
araB_S 186276187985
araC_S 188323189168
yabI_S 189297190064
tbpA_S 192322193266
yabN_S 193595195250
KP1_0882_S 195332195490
setA_S 195758196942
gudP_S 196976198286
ilvI_S 211607213331
ilvH_S 213304213825
fruR_S 214006215010
KP1_0903_S 215615216109
mraW_S 216112217053
ftsL_S 217050217415
ftsI_S 217431219197
mutT_S 237168237560
yacG_S 237613237807
KP1_0925_S 237817238560
coaE_S 238560239180
KP1_0927_S 239336239467
guaC_S 239524240567
ppdD_S 243195243626
nadC_S 243808244701
ampD_S 244835245398
ampE_S 245395246249
KP1_0935_S 246485247435
KP1_0936_S 247435248841
lpdA_S 256736258163
KP1_0945_S 258328258612
KP1_0946_S 258658259473
hpt_S 274006274554
yadG_S 275461276387
yadH_S 276384277154
yadI_S 277277277717
KP1_0965_S 277782279029
folK_S 281316281795
yadB_S 283249284130
dksA_S 284190284663
sfsA_S 284808285524
map_S 328717329511
rpsB (30S ribosomal protein S2) 329834330559
tsf_S 330679331530
pyrH_S 331681332406
frr_S 332557333114
ispC_S 333343334545
16028779320256KP1_4652_S 87379237 EMBL GBK
endA_S 927510039
KP1_4654_S 1005610862
gshB_S 1088311833
KP1_4657_S 1200812571
yqgF_S 1257112987
KP1_4731_S 7547376144
ygiC_S 7615077310
ygiD_S 7735578146
ygiE_S 7833379103
ribB_S 7916579818
uppP_S 8871889539
folB_S 8973890124
KP1_4750_S 9022990846
ureD_S 9124492068
ureA_S 9207892380
ureB_S 9239092710
rpsU (30S ribosomal protein S21) 9925199466
KP1_4812_S 179801180301
ygjR_S 180375181364
ygjT_S 181636182607
ygjU_S 182874184121
KP1_4816_S 184137184691
KP1_4822_S 191431191814
KP1_4823_S 191964192332
KP1_4824_S 192378192683
KP1_4825_S 192686193084
KP1_4826_S 193081193377
KP1_4861_S 208923209309
yraO_S 209299209925
yraP_S 209935210510
KP1_4865_S 210632211672
yhbO_S 212395213060
KP1_4868_S 213022213465
KP1_4870_S 213792214295
KP1_4871_S 214289214813
yhbU_S 215035216030
yhbV_S 216021216914
yhbW_S 217058218065
rpsO (30S ribosomal protein S15) 224979225248
infB 227889228206
rpmA (50S ribosomal protein L27) 246352246609
rplU (50S ribosomal protein L21) 246630246941
yrbI_S 255708256274
KP1_4921_S 256271256846
yhbN_S 256815257360
yhbG_S 257367258092
rpoN_S 258140259573
yhbH_S 259596259883
ptsN_S 259954260442
KP1_4927_S 260488261342
ptsO_S 261339261611
rpsI (30S ribosomal protein S9) 279394279786
rplM (50S ribosomal protein L13) 279802280230
mdh 285294285770
KP1_4977_S 304832305023
KP1_4978_S 305237306253
KP1_4979_S 306253306861
KP1_4980_S 307085307537
accB_S 307560308027
accC_S 308038309387
KP1_4984_S 309498309740
prmA_S 311193312074
KP1_4987_S 312044312274
160282510308338ylbF 2060021403 EMBL GBK
ylbE 2141222671
allD 2466325712
allC 2573426969
KP1_1371 2698027762
glxK 2797929124
ybbY 2914230452
allB 3063831999
KP1_1364 3366134917
glxR 3497235850
hyi 3597036746
gcl 3676038541
allR 3862939447
allA 3953940021
allS 4023041153
fsr_S 5890260122
ybaL_S 6034862024
gsk_S 6206063364
hemH_S 6342864390
adk_S 6451965163
rpmJ (50S ribosomal protein L36) 8653086670
rpmE (50S ribosomal protein L31) 8667086933
rpmE2_S 8667086933
lacI_S 8704988119
ptsG_S 8979890112
KP1_1275_S 118659119027
ppiD_S 119176121050
hupB_S 121265121537
lon_S 121747124209
clpX_S 124285125559
clpP_S 125810126433
tig_S 126743128041
KP1_1251_S 142495143313
KP1_1248_S 145020146198
yajR_S 146358147722
KP1_1246_S 147766148350
apbA_S 148449149360
thiJ_S 149317149916
nrdR_S 159887160336
yajI_S 160484161023
tsx_S 161324162208
KP1_1228_S 162263162958
KP1_1227_S 162982163347
KP1_1211_S 174109174975
KP1_1209_S 176927177472
KP1_1207_S 177659178300
KP1_1206_S 178567179469
phoE 245376245795
crl_S 278212278610
frsA_S 278668279912
gpt_S 280018280476
pepD_S 280734282191
yafP_S 282234282686
yafE_S 303369304139
KP1_1068_S 304231305037
yafC_S 306426307331
dkgB_S 307377308180
160282811278481KP1_3440_S 5268253128 EMBL GBK
ycgM_S 5322353882
KP1_3442_S 5389954219
minC_S 5430755005
minD_S 5502955841
minE_S 5584556114
fadD_S 5738959074
yeaY_S 5928059861
yeaZ_S 5990060595
KP1_3451_S 6278363127
KP1_3486_S 9657296955
holE_S 9705997289
exoX_S 9736898027
ptrB_S 98031100091
KP1_3490_S 100212100871
yebG_S 101011101358
purT_S 101503102681
msbB_S 109761110735
KP1_3501_S 110853112172
znuA_S 112188113258
znuC_S 113211113963
znuB_S 113963114748
ruvB_S 114812115822
ruvA_S 115831116442
ftnA_S 143060143557
KP1_3536_S 143593143832
tyrP_S 144024145235
KP1_3538_S 145260145928
dapA4_S 146027146908
KP1_3551_S 192960193391
rcsA_S 193767194390
KP1_3553_S 194423194614
KP1_3554_S 194745194969
yedI_S 197064197975
160283912157750pyrD_S 101863102900 EMBL GBK
ssuE_S 103123103698
ssuA_S 103691104653
ssuD_S 104650105795
ssuC_S 105806106597
KP1_1916_S 135953137182
msbA_S 138214139962
ihfB_S 142469142756
rpsA (30S ribosomal protein S1) 142908144581
1602873 13 111170
16028621499296KP1_0122_S 2511102 EMBL GBK
btuB_S 10472885
KP1_0120_S 29283050
trmA_S 32524352
KP1_0118_S 44044763
yijC_S 47795411
rpmE (50S ribosomal protein L31) 3003830250
cpxP_S 4075641259
cpxR_S 4140942107
cpxA_S 4210443477
KP1_0077_S 4354544219
sodA_S 4429244918
rhaT_S 4520246236
rhaR_S 4626947114
rhaS_S 4718848024
rhaB_S 4833549801
rhaA_S 4979251057
rhaD_S 5120752037
bipA_S 8167383496
glnA_S 8387585284
glnL_S 8547386522
glnG_S 8653187940
hemN_S 8819789570
KP1_0026_S 8975990265
engB_S 9084991481
polA_S 9182994621
16028401592626fadA_S 64167579 EMBL GBK
fre_S 76878388
ubiD_S 84389913
rfaH_S 1009210580
tatD_S 1057711368
tatC_S 1141312192
tatB_S 1219512731
tatA_S 1273513034
ubiB_S 1311614756
KP1_0193_S 1475315358
ubiE_S 1537216127
yigN_S 1619817646
udp_S 1778218543
metR_S 2860229555
yigM_S 2944330342
KP1_0183_S 3043131231
pldB_S 3127632268
rhtB_S 3237832998
yigB_S 4268543401
xerC_S 4340144303
KP1_0169_S 4430045007
dapF_S 4500445831
KP1_0167_S 4586446067
cyaY_S 4621446534
ilvY_S 8170282676
ilvA_S 8267384160
ilvD_S 8422086070
ilvE_S 8613187060
ilvM_S 8707787334
1602817 16 86820
16028551772861ycfW_S 1030411548 EMBL GBK
ycfV_S 1154812249
ycfU_S 1224213450
mfd_S 1374617192
ycfS_S 1735618315
ycfQ_S 1895119586
KP1_2092_S 2782028176
ptsG2_S 2843829871
ycfH_S 3016830962
holB_S 3097331977
tmk_S 3197432615
yceG_S 3260533627
pabC_S 3362934438
fabF_S 3456435805
fabG_S 3634237076
fabD_S 3708938018
fabH_S 3803438987
plsX_S 3904140138
rpmF (50S ribosomal protein L32) 4034240515
KP1_2077_S 4053241053
yceF_S 4119541779
mdoC_S 6714468304
KP1_2048_S 6833968932
KP1_2047_S 6899969544
ycdZ_S 6967670158
ycdY_S 7026270816
KP1_2044_S 7083971576
16028151851921terY 2893029568 EMBL GBK
terW 3004730505
terZ 3706937653
terB 3882439279
terC 3930340343
terD 4038240960
terE 4104741622
16028481945240fyuA 1336915390 EMBL GBK
ybtE 1552117098
ybtT 1710217905
ybtU 1790219002
irp1 1899928490
irp2 2857834685
ybtA 3487635835
ybtP 3609237804
ybtQ 3779139593
ybtX 3958640866
ybtS 4089442198
1602824 20 37717
16028112134261rplK (50S ribosomal protein L11) 14671895 EMBL GBK
rplA (50S ribosomal protein L1) 18992603
rplJ (50S ribosomal protein L10) 30173514
rplL (50S ribosomal protein L7/L12) 35813946
rpoB 59276427
rsd_S 2265823155
nudC_S 2324924022
hemE_S 2406325127
nfi_S 2514025811
KP1_0239_S 2585426444
KP1_0241_S 2663126903
KP1_0242_S 2691027611
zraP_S 2761528052
1602869 22 33866
1602872 23 31228
1602866 24 27772
16028582526067yrdA_S 200754 EMBL GBK
KP1_4999_S 730987
aroE_S 9841802
yrdC_S 18062423
yrdD_S 23832925
KP1_5003_S 29523425
smf_S 33974521
def_S 46505159
KP1_5012_S 1011310481
rplQ (50S ribosomal protein L17) 1059010976
KP1_5015_S 1101712006
rpsD (30S ribosomal protein S4) 1203212652
rpsK (30S ribosomal protein S11) 1268613075
rpsM (30S ribosomal protein S13) 1309213448
rpmJ (50S ribosomal protein L36) 1359513711
secY_S 1374515076
rplO (50S ribosomal protein L15) 1508415518
rpmD (50S ribosomal protein L30) 1552215701
rpsE (30S ribosomal protein S5) 1570516208
rplR (50S ribosomal protein L18) 1622316576
rplF (50S ribosomal protein L6) 1658617119
rpsH (30S ribosomal protein S8) 1713217524
rpsN (30S ribosomal protein S14) 1755817863
rplE (50S ribosomal protein L5) 1787818417
rplX (50S ribosomal protein L24) 1843218746
rplN (50S ribosomal protein L14) 1875719128
rpsQ (30S ribosomal protein S17) 1929419548
rpmC (50S ribosomal protein L29) 1954819739
rplP (50S ribosomal protein L16) 1973920149
rpsC (30S ribosomal protein S3) 2016220860
rplV (50S ribosomal protein L22) 2087821210
rpsS (30S ribosomal protein S19) 2122521503
rplB (50S ribosomal protein L2) 2152022341
rplW (50S ribosomal protein L23) 2235922661
rplD (50S ribosomal protein L4) 2265823263
rplC (50S ribosomal protein L3) 2327423903
rpsJ (30S ribosomal protein S10) 2393624247
1602814 26 16829
1602821 27 12418
1602859 28 10740
1602833 29 10012
1602857 30 9415
1602826 31 8009
1602809 32 7841
1602808 33 6405
1602883 34 5408
1602827 35 4668
1602876 36 4590
1602884 37 4279
1602881 38 3690
1602835 39 2945
1602861 40 2802
1602838 41 2672
1602870 42 2054
1602885 43 1897
1602818 44 1688
1602846 45 1279
1602871 46 1270
1602879 47 1230
1602830 48 1221
1602865 49 1150
1602834 50 1072
1602878 51 1055
1602841 52 1050
1602867 53 1049
1602850 54 1020
1602819 55 994
1602843 56 984
1602822 57 917
1602837 58 821
1602864 59 769
1602842 60 725
1602823 61 707
1602849 62 659
1602810 63 585
1602836 64 488
1602832 65 460
1602845 66 449
1602851 67 426
1602853 68 401
1602863 69 373
1602852 70 272
1602812 71 270
1602816 72 262
1602844 73 262
1602820 74 240
1602860 75 215
1602847 76 212
1602831 77 206
1602829 78 206
1602868 79 204