Sequence bin for T7-017

Contig summary statistics

Contigs
37
Total length
5,252,299
Minimum length
200
Maximum length
900,125
Mean length
141,955
N50
444,847
L50
5
N90
213,904
L90
11
N95
104,596
L95
13

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
15767561900125KP1_2532_S 117132117467 EMBL GBK
ydgB_S 117464118186
ydgI_S 118223119605
KP1_2535_S 119783120733
KP1_2536_S 120730120912
blaSHV (SHV beta-lactamase) 205733206590
KP1_2672_S 239793240737
KP1_2673_S 240882241364
yneJ_S 241318242196
yneI_S 242793243686
yneH_S 243767244693
KP1_2697_S 257156257827
KP1_2700_S 259430260458
KP1_2702_S 261026261337
KP1_2703_S 261514262269
gst_S 598031598636
pdxY_S 598679599539
tyrS_S 599601600875
pdxH_S 601000601656
KP1_3049_S 601714602037
anmK_S 602130603227
ydhM_S 611297611896
nemA_S 611950613047
gloA_S 613126613533
KP1_3065_S 614366614713
ydhO_S 615054615926
rplT (50S ribosomal protein L20) 813595813951
rpmI (50S ribosomal protein L35) 814002814199
KP1_3289_S 817703818461
pfkB_S 818818819750
KP1_3291_S 819845820129
tonB 821331821744
chaC_S 871362872042
chaB_S 872179872409
chaA_S 872673873773
kdsA_S 873860874714
ychQ_S 875570875962
hemK_S 875962876810
prfA_S 876810877892
15767552669050betA_S 6872370432 EMBL GBK
betB_S 7040171873
betT_S 7260374636
ykfE_S 7468275209
KP1_1607_S 152919153716
dcuC_S 153809155182
pagP_S 155521156039
cspE_S 156150156443
KP1_1612_S 156510156893
ybeM_S 156983157771
tatE_S 158014158220
lipA_S 158411159376
ybeF_S 159557160561
KP1_1623_S 167311167778
KP1_1624_S 167782168099
nadD_S 169024169677
holA_S 169667170689
rlpB_S 170698171288
nagD_S 192310193062
nagC_S 193179194399
nagA_S 194408195556
nagB_S 195670196470
nagE_S 196785198740
glnS_S 198919200586
metH_S 200640200948
KP1_1656_S 201925202425
KP1_1657_S 202473202805
fur_S 203422203874
fldA_S 204166204765
KP1_1661_S 204848205210
ybfF_S 205275206048
KP1_1663_S 206088206780
cydA_S 239554241125
cydB_S 241141242280
KP1_1696_S 242412242702
KP1_1697_S 242852243256
tolQ_S 243253243945
tolR_S 243949244377
ybhA_S 265628266446
ybhE_S 266675267670
KP1_1726_S 267781268047
KP1_1727_S 268099268404
KP1_1728_S 268532268777
KP1_1729_S 269106270317
KP1_1730_S 270473271207
KP1_1731_S 271249271803
KP1_1732_S 271885272250
KP1_1734_S 273354274277
glnH_S 337417338163
dps_S 338572339075
ybiF_S 339313340200
ompX_S 340552341067
ybiP_S 341158342747
KP1_1803_S 343007343132
mntR_S 343318343791
ybiR_S 343788344900
potH_S 396021396974
potI_S 396929397816
KP1_1853_S 397874398362
KP1_1855_S 399610400326
hcr_S 415350416318
hcp_S 416329417981
ybjE_S 418125419024
rpsA (30S ribosomal protein S1) 459672461345
ihfB_S 461497461784
msbA_S 464291466039
KP1_1916_S 467071468300
ssuC_S 497655498446
ssuD_S 498457499602
ssuA_S 499599500561
ssuE_S 500554501129
pyrD_S 501352502389
kfuA 535918536934
kfuB 536956538530
kfuC 538532539560
KP1_2044_S 597696598433
ycdY_S 598456599010
ycdZ_S 599114599596
KP1_2047_S 599728600273
KP1_2048_S 600340600933
mdoC_S 600968602128
yceF_S 627488628072
KP1_2077_S 628214628735
rpmF (50S ribosomal protein L32) 628752628925
plsX_S 629129630226
fabH_S 630280631233
fabD_S 631249632178
fabG_S 632191632925
fabF_S 633462634703
pabC_S 634829635638
yceG_S 635640636662
tmk_S 636652637293
holB_S 637290638294
ycfH_S 638305639099
ptsG2_S 639396640829
KP1_2092_S 641091641447
iutA 647248649449
ycfQ_S 649681650316
ycfS_S 650952651917
mfd_S 652075655521
ycfU_S 655817657025
ycfV_S 657018657719
ycfW_S 657719658963
15767763534099epd_S 3861414 EMBL GBK
pgk_S 14542617
fbaA_S 27153794
yggB_S 39854842
yggA_S 49945629
yggE_S 57196486
KP1_4633_S 1076611095
KP1_4632_S 1125611840
pepP_S 1186413180
KP1_4629_S 1436615568
KP1_4618_S 2669727425
KP1_4617_S 2747527786
yqfA_S 2795028609
KP1_4613_S 2998930255
KP1_4612_S 3023630646
fldB_S 3065331174
xerD_S 3127532171
dsbC_S 3219432907
kvgA 5489155514
mrkA 115558116166
mrkB 116262116963
mrkD 119452120447
mrkF 120461121096
mrkJ 121131121847
mrkI 121991122575
mrkH 122581123285
KP1_4524_S 148799150199
KP1_4523_S 150207151634
KP1_4521_S 151702152475
KP1_4520_S 152472152951
galR_S 152912153928
ygdP_S 161756162286
ptsP_S 162299164545
lgt_S 164791165666
thyA_S 165673166467
ppdA_S 166738167205
argA_S 180849182180
amiC_S 182372183661
cobD_S 183679184755
pduX_S 184759185661
pduW_S 185717186931
KP1_4457_S 211602212327
KP1_4456_S 212324213109
KP1_4455_S 213120213914
KP1_4453_S 214621215358
KP1_4452_S 215360215641
cbiQ_S 215628216305
KP1_4281_S 401531403207
emrA_S 404898406070
emrR_S 406196406696
ygaH_S 406817407152
smpB_S 507568508050
KP1_4197_S 508161508637
KP1_4196_S 508627508917
smpA_S 508984509325
ppnK_S 511221512099
grpE_S 512224512814
rpsP (30S ribosomal protein S16) 516798517046
rplS (50S ribosomal protein L19) 518452518799
15767814481590yieP_S 241942 EMBL GBK
rbsK_S 33454274
rbsB_S 43785268
rbsC_S 52966261
gidB_S 1795118574
atpI_S 1911919571
atpB_S 1957920394
atpE_S 2044420683
atpF_S 2074021204
rpmH (50S ribosomal protein L34) 4951949659
yicE_S 149355150755
gltS_S 151403152233
glpK_S 152348153859
glpF_S 153881154732
KP1_5367_S 155175155420
sbp_S 155572156561
rpmB (50S ribosomal protein L28) 186115186351
rpmG (50S ribosomal protein L33) 186372186539
KP1_5309_S 205255206202
KP1_5307_S 206206207477
yibO_S 207487209112
yibN_S 209277209708
grxC_S 209815210066
secB_S 210127210594
KP1_5262_S 261157261867
tkrA_S 261976262947
KP1_5260_S 262972264252
KP1_5259_S 264357265292
KP1_5258_S 265296266045
KP1_5213_S 320134321165
KP1_5210_S 323084323653
prlC_S 331443333485
KP1_5202_S 333436334245
yhiP_S 334389335861
uspA_S 336118336555
yhiO_S 336938337273
pitA_S 337329338825
asd_S 396993398147
glgB_S 398386400572
glgX_S 400665402545
glgC_S 402626403921
glgA_S 403921405354
aroK_S 446463446984
aroB_S 447040448134
dam_S 449584450411
rpe_S 450429451106
gph_S 451099451860
trpS_S 451853452857
cysG_S 452930454303
nirD_S 454457454783
yhfC_S 458881460068
ppiA_S 460345460914
KP1_5076_S 461021461188
KP1_5075_S 461178461780
pabA_S 461813462376
crp_S 465807466439
KP1_5070_S 466746467150
prkB_S 467205468074
KP1_5068_S 468111468329
yheT_S 468326469348
yheS_S 469552471456
rpsL (30S ribosomal protein S12) 478264478638
rpsG (30S ribosomal protein S7) 478735479205
15767855444847ung_S 87729461 EMBL GBK
yfiD_S 977410157
srmB_S 1020311534
yfiC_S 1164512403
nadB_S 1238814007
yfhK_S 3264334082
yfhG_S 3409134798
yfhA_S 3478536122
KP1_4132_S 3618836526
hmpA_S 3660137791
glyA_S 3811739370
suhB_S 5205552858
yfhQ_S 5297953713
iscR_S 5394854439
iscS_S 5461855832
KP1_4113_S 5585956245
iscA_S 5626356586
hscB_S 5666157176
hemF_S 149460150359
amiA_S 150359151231
KP1_4027_S 151281151421
ypeA_S 151428151868
KP1_4024_S 151855152304
KP1_4023_S 152366152941
KP1_4022_S 153036153935
aroC_S 206848207936
mepA_S 207939208763
yfcA_S 208763209572
yfcM_S 209572210120
KP1_3965_S 210152210433
flk_S 215334216311
KP1_3960_S 216310216438
pdxB_S 216422217558
KP1_3958_S 217622218635
truA_S 218635219447
dedA_S 219474220133
accD_S 220256221239
folX_S 232244232606
yfcG_S 232672233301
yfcF_S 233482234120
yfcD_S 234792235343
nuoA_S 247335247781
nuoB_S 247797248471
nuoC_S 248558250366
nuoE_S 250369250869
nuoF_S 250866252203
yejM_S 313650315410
KP1_3855_S 315429315656
yejK_S 315843316850
KP1_3853_S 316870317631
KP1_3852_S 317675318310
rsuA_S 322992323711
bcr_S 323708324904
KP1_3844_S 325236325580
yejE_S 327175328200
folE_S 353564354232
galS_S 355560356582
mglB_S 356879357877
mglA_S 357996359516
15767746353496ispC_S 2876529967 EMBL GBK
frr_S 3019630753
pyrH_S 3090431629
tsf_S 3177932630
rpsB (30S ribosomal protein S2) 3275033475
map_S 3379834592
sfsA_S 7777678492
dksA_S 7863779110
yadB_S 7917080051
folK_S 8150581984
KP1_0965_S 8427185518
yadI_S 8558386023
yadH_S 8614686916
yadG_S 8691387839
hpt_S 8874689294
KP1_0946_S 103743104558
KP1_0945_S 104604104888
lpdA_S 105053106480
KP1_0936_S 114393115799
KP1_0935_S 115799116749
ampE_S 116985117839
ampD_S 117836118399
nadC_S 118533119426
ppdD_S 119608120039
guaC_S 122667123710
KP1_0927_S 123767123898
coaE_S 124054124674
KP1_0925_S 124674125417
yacG_S 125427125621
mutT_S 125674126066
ftsI_S 144037145803
ftsL_S 145819146184
mraW_S 146181147122
KP1_0903_S 147125147619
fruR_S 148224149228
ilvH_S 149409149930
ilvI_S 149903151627
gudP_S 164949166259
setA_S 166293167477
KP1_0882_S 167745167903
yabN_S 167985169640
tbpA_S 169969170913
yabI_S 173171173938
araC_S 174067174912
araB_S 175250176959
araA_S 176970178472
araD_S 178610179305
pdxA_S 195199196188
ksgA_S 196185197006
apaG_S 197009197386
apaH_S 197391198239
folA_S 198492198971
kefC_S 199145201010
yabF_S 201003201536
rpsT (30S ribosomal protein S20) 217156217419
thrB_S 232858233787
thrA_S 233789236293
lasT_S 236613237299
arcA_S 237932238648
creC_S 240130241554
creB_S 241554242243
yjjK_S 247652249319
nadR_S 249413250645
sms_S 250667252049
serB_S 252059253051
smp_S 253135253782
lplA_S 253782254798
KP1_0801_S 254879255598
deoB_S 255701256924
deoA_S 256977258299
prfC_S 264166265755
yjjG_S 265846266523
rimI_S 266538266984
holD_S 266953267366
mtr_S 269010269363
ycdT_S 269514270560
fhuF_S 270667271455
KP1_0776_S 275274276155
KP1_0775_S 276172277356
yjjP_S 277636278412
yjjB_S 278388278876
dnaT_S 278979279518
dnaC_S 279521280258
yjjA_S 280324280815
15767527338155KP1_4987_S 79838213 EMBL GBK
prmA_S 81839064
KP1_4984_S 1051710759
accC_S 1087012219
accB_S 1223012697
KP1_4980_S 1272013172
KP1_4979_S 1339614004
KP1_4978_S 1400415020
KP1_4977_S 1523515426
mdh 3448834964
rplM (50S ribosomal protein L13) 4002840456
rpsI (30S ribosomal protein S9) 4047240864
ptsO_S 5864758919
KP1_4927_S 5891659770
ptsN_S 5981660304
yhbH_S 6037560662
rpoN_S 6068562118
yhbG_S 6216662891
yhbN_S 6289863443
KP1_4921_S 6341263987
yrbI_S 6398464550
rplU (50S ribosomal protein L21) 7331773628
rpmA (50S ribosomal protein L27) 7364973906
infB 9205292369
rpsO (30S ribosomal protein S15) 9501095279
yhbW_S 113360114367
yhbV_S 114511115404
yhbU_S 115395116390
KP1_4871_S 116612117136
KP1_4870_S 117130117633
KP1_4868_S 117960118403
yhbO_S 118365119030
KP1_4865_S 119753120793
yraP_S 120915121490
yraO_S 121500122126
KP1_4861_S 122116122502
KP1_4826_S 137937138233
KP1_4825_S 138230138628
KP1_4824_S 138631138936
KP1_4823_S 138982139350
KP1_4822_S 139500139883
KP1_4816_S 146623147177
ygjU_S 147193148440
ygjT_S 148707149678
ygjR_S 149950150939
KP1_4812_S 151013151513
rpsU (30S ribosomal protein S21) 230086230301
ureB_S 236842237162
ureA_S 237172237474
ureD_S 237484238308
KP1_4750_S 238706239323
folB_S 239428239814
uppP_S 240013240834
ribB_S 249734250387
ygiE_S 250449251219
ygiD_S 251406252197
ygiC_S 252242253402
KP1_4731_S 253408254079
yqgF_S 325388325804
KP1_4657_S 325804326367
gshB_S 326542327492
KP1_4654_S 327513328319
endA_S 328336329100
KP1_4652_S 329138329638
15767808335492dkgB_S 165968 EMBL GBK
yafC_S 10141919
KP1_1068_S 33084114
yafE_S 42064976
yafP_S 2565926111
pepD_S 2615427611
gpt_S 2786928327
frsA_S 2843329677
crl_S 2973530133
phoE 7041070829
KP1_1206_S 137992138894
KP1_1207_S 139161139802
KP1_1209_S 139989140534
KP1_1211_S 142486143352
KP1_1227_S 154114154479
KP1_1228_S 154504155199
tsx_S 155254156138
yajI_S 156437156976
nrdR_S 157124157573
thiJ_S 167544168143
apbA_S 168100169011
KP1_1246_S 169110169694
yajR_S 169738171102
KP1_1248_S 171261172439
KP1_1251_S 174146174964
tig_S 189417190715
clpP_S 191025191648
clpX_S 191899193173
lon_S 193249195711
hupB_S 195921196193
ppiD_S 196408198282
KP1_1275_S 198431198799
ptsG_S 227257227571
lacI_S 229250230320
rpmE2_S 230436230699
rpmE (50S ribosomal protein L31) 230436230699
rpmJ (50S ribosomal protein L36) 230699230839
adk_S 252207252851
hemH_S 252980253942
gsk_S 254006255310
ybaL_S 255346257022
fsr_S 257248258468
15767779272550celC_S 169152169499 EMBL GBK
celA_S 171059171379
osmE_S 171658171996
nadE_S 172279173106
spy_S 174158174640
KP1_2225_S 203556203900
KP1_2224_S 203995204273
yeaA_S 204317204730
gapA 205312205761
KP1_2220_S 206139207023
yeaE_S 207080207964
157676610269785KP1_3440_S 5608556531 EMBL GBK
ycgM_S 5662657285
KP1_3442_S 5730257622
minC_S 5771058408
minD_S 5843259244
minE_S 5924859517
fadD_S 6079262477
yeaY_S 6268363264
yeaZ_S 6330363998
KP1_3451_S 6618666530
KP1_3486_S 99961100344
holE_S 100448100678
exoX_S 100757101416
ptrB_S 101420103480
KP1_3490_S 103601104260
yebG_S 104400104747
purT_S 104892106070
msbB_S 113150114124
KP1_3501_S 114242115561
znuA_S 115577116647
znuC_S 116600117352
znuB_S 117352118137
ruvB_S 118201119211
ruvA_S 119220119831
ftnA_S 146448146945
KP1_3536_S 146981147220
tyrP_S 147412148623
KP1_3538_S 148648149316
dapA4_S 149415150296
KP1_3551_S 160876161307
rcsA_S 161683162306
KP1_3553_S 162339162530
KP1_3554_S 162661162885
yedI_S 164980165891
wzi (Wzi outer membrane protein of cps cluster) 263970264416
157676911213904yjgB_S 4215643175 EMBL GBK
KP1_0569_S 4330644190
KP1_0568_S 4418045067
KP1_0567_S 4507845902
KP1_0517_S 9487695616
KP1_0516_S 9560196704
KP1_0515_S 9561396731
KP1_0514_S 9671597848
KP1_0513_S 9795498598
rplI (50S ribosomal protein L9) 146465146914
rpsR (30S ribosomal protein S18) 146956147183
priB_S 147188147355
rpsF (30S ribosomal protein S6) 147508147903
KP1_0467_S 148244148519
KP1_0446_S 165282165479
KP1_0445_S 165651165992
hflC_S 166075167079
hflK_S 167082168344
hflX_S 168410169690
hfq_S 169766170074
frdD_S 191235191624
blc_S 191738192271
sugE_S 192268192585
ecnB_S 192729192875
ecnA_S 193035193166
efp_S 193240193806
157677812149043hmsS_S 2176222211 EMBL GBK
KP1_0379_S 2225723090
KP1_0378_S 2325323951
cbpA_S 2409725014
KP1_0375_S 2499925319
ssb_S 9555796081
uvrA_S 9633399158
KP1_0300_S 9915999515
KP1_0299_S 9951999935
pgi 128854129285
iclR_S 141334142260
aceK_S 142310144094
aceA_S 144197145516
metA_S 147443148372
yjaB_S 148529148990
157677113104596KP1_0122_S 3651216 EMBL GBK
btuB_S 11612999
KP1_0120_S 30423164
trmA_S 33664466
KP1_0118_S 45184877
yijC_S 48935525
rpmE (50S ribosomal protein L31) 3015230364
cpxP_S 5134351846
cpxR_S 5199652694
cpxA_S 5269154064
KP1_0077_S 5413254806
sodA_S 5487955505
rhaT_S 5578956823
rhaR_S 5685657701
rhaS_S 5777558611
rhaB_S 5892260388
rhaA_S 6037961644
rhaD_S 6179462624
bipA_S 8704288865
glnA_S 8924490653
glnL_S 9084291891
glnG_S 9190093309
hemN_S 9356694939
KP1_0026_S 9512895634
engB_S 9621896850
polA_S 9719899990
15767641486421ilvM_S 52995556 EMBL GBK
ilvE_S 55736502
ilvD_S 65638413
ilvA_S 84739960
ilvY_S 995710931
cyaY_S 4618546505
KP1_0167_S 4665246855
dapF_S 4688847715
KP1_0169_S 4771248419
xerC_S 4841649318
yigB_S 4931850034
rhtB_S 5972160341
pldB_S 6045161443
KP1_0183_S 6148862288
yigM_S 6237763276
metR_S 6316464117
udp_S 6777368534
yigN_S 6867070118
ubiE_S 7018970944
KP1_0193_S 7095871563
ubiB_S 7156073200
tatA_S 7328273581
tatB_S 7358574121
tatC_S 7412474903
tatD_S 7494875739
rfaH_S 7573676224
ubiD_S 7640377878
fre_S 7792878629
fadA_S 7873679899
15767791534239zraP_S 61886625 EMBL GBK
KP1_0242_S 66297330
KP1_0241_S 73377609
KP1_0239_S 77968386
nfi_S 84299100
hemE_S 911310177
nudC_S 1021810991
rsd_S 1108511582
rpoB 2781328313
rplL (50S ribosomal protein L7/L12) 3029430659
rplJ (50S ribosomal protein L10) 3072631223
rplA (50S ribosomal protein L1) 3163732341
rplK (50S ribosomal protein L11) 3234532773
15767591626052yrdA_S 185739 EMBL GBK
KP1_4999_S 715972
aroE_S 9691787
yrdC_S 17912408
yrdD_S 23682910
KP1_5003_S 29373410
smf_S 33824506
def_S 46355144
KP1_5012_S 1009810466
rplQ (50S ribosomal protein L17) 1057510961
KP1_5015_S 1100211991
rpsD (30S ribosomal protein S4) 1201712637
rpsK (30S ribosomal protein S11) 1267113060
rpsM (30S ribosomal protein S13) 1307713433
rpmJ (50S ribosomal protein L36) 1358013696
secY_S 1373015061
rplO (50S ribosomal protein L15) 1506915503
rpmD (50S ribosomal protein L30) 1550715686
rpsE (30S ribosomal protein S5) 1569016193
rplR (50S ribosomal protein L18) 1620816561
rplF (50S ribosomal protein L6) 1657117104
rpsH (30S ribosomal protein S8) 1711717509
rpsN (30S ribosomal protein S14) 1754317848
rplE (50S ribosomal protein L5) 1786318402
rplX (50S ribosomal protein L24) 1841718731
rplN (50S ribosomal protein L14) 1874219113
rpsQ (30S ribosomal protein S17) 1927919533
rpmC (50S ribosomal protein L29) 1953319724
rplP (50S ribosomal protein L16) 1972420134
rpsC (30S ribosomal protein S3) 2014720845
rplV (50S ribosomal protein L22) 2086321195
rpsS (30S ribosomal protein S19) 2121021488
rplB (50S ribosomal protein L2) 2150522326
rplW (50S ribosomal protein L23) 2234422646
rplD (50S ribosomal protein L4) 2264323248
rplC (50S ribosomal protein L3) 2325923888
rpsJ (30S ribosomal protein S10) 2392124232
1576754 17 20390
1576757 18 4194
1576784 19 2712
1576763 20 1953
1576751 21 1043
1576770 22 1037
1576772 23 1037
1576761 25 879
1576765 24 879
1576753 26 686
1576760 27 535
1576762 28 524
1576773 29 523
1576758 30 494
1576767 31 425
1576750 32 358
1576749 33 274
1576782 34 274
1576768 35 237
1576775 36 201
1576783 37 200