Sequence bin for SPARK_2066_C1

Contig summary statistics

Contigs
13
Total length
5,115,156
Minimum length
2,682
Maximum length
1,886,776
Mean length
393,474
N50
1,055,244
L50
2
N90
345,930
L90
6
N95
100,962
L95
7

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1515409SPARK_2066_C1_11886776yeaE_S 6357664460 EMBL GBK
KP1_2220_S 6451765401
gapA 6577966228
yeaA_S 6681067223
KP1_2224_S 6726767545
KP1_2225_S 6764067984
spy_S 105959106441
nadE_S 107493108320
osmE_S 108603108941
celA_S 109220109540
celC_S 111100111447
KP1_2532_S 400174400509
ydgB_S 400506401228
ydgI_S 401265402647
KP1_2535_S 402825403775
KP1_2536_S 403772403954
blaSHV (SHV beta-lactamase) 486720487577
KP1_2672_S 520780521724
KP1_2673_S 521869522351
yneJ_S 522305523183
yneI_S 523780524673
yneH_S 524754525680
KP1_2697_S 539318539989
KP1_2700_S 541592542620
KP1_2702_S 543188543499
KP1_2703_S 543676544431
gst_S 877224877829
pdxY_S 877872878732
tyrS_S 878794880068
pdxH_S 880193880849
KP1_3049_S 880907881230
anmK_S 881323882420
ydhM_S 890491891090
nemA_S 891144892241
gloA_S 892320892727
KP1_3065_S 893560893907
ydhO_S 894248895120
rplT (50S ribosomal protein L20) 10863291086685
rpmI (50S ribosomal protein L35) 10867361086933
KP1_3289_S 10904381091196
pfkB_S 10915531092485
KP1_3291_S 10925801092864
tonB 10940661094479
chaC_S 11441091144789
chaB_S 11449261145156
chaA_S 11454201146520
kdsA_S 11466071147461
ychQ_S 11483171148709
hemK_S 11487091149557
prfA_S 11495571150639
KP1_3440_S 12287841229230
ycgM_S 12293251229984
KP1_3442_S 12300011230321
minC_S 12304091231107
minD_S 12311311231943
minE_S 12319471232216
fadD_S 12334911235176
yeaY_S 12353821235963
yeaZ_S 12360021236697
KP1_3451_S 12388851239229
KP1_3486_S 12726911273074
holE_S 12731781273408
exoX_S 12734871274146
ptrB_S 12741501276210
KP1_3490_S 12763311276990
yebG_S 12771301277477
purT_S 12776221278800
msbB_S 12858811286855
KP1_3501_S 12869731288292
znuA_S 12883081289378
znuC_S 12893311290083
znuB_S 12900831290868
ruvB_S 12909321291942
ruvA_S 12919511292562
ftnA_S 13191781319675
KP1_3536_S 13197111319950
tyrP_S 13201421321353
KP1_3538_S 13213781322046
dapA4_S 13221451323026
KP1_3551_S 13336281334059
rcsA_S 13344351335058
KP1_3553_S 13350911335282
KP1_3554_S 13354131335637
yedI_S 13377321338643
wzi (Wzi outer membrane protein of cps cluster) 14312401431686
mglA_S 15220651523585
mglB_S 15237041524702
galS_S 15249991526021
folE_S 15273501528018
yejE_S 15549221555947
KP1_3844_S 15575421557886
bcr_S 15582181559414
rsuA_S 15594111560130
KP1_3852_S 15648121565447
KP1_3853_S 15654911566252
yejK_S 15662721567279
KP1_3855_S 15674661567693
yejM_S 15677121569472
nuoF_S 16309081632245
nuoE_S 16322421632742
nuoC_S 16327451634553
nuoB_S 16346401635314
nuoA_S 16353301635776
yfcD_S 16477681648319
yfcF_S 16489911649629
yfcG_S 16498101650439
folX_S 16505051650867
accD_S 16618651662848
dedA_S 16629711663630
truA_S 16636571664469
KP1_3958_S 16644691665482
pdxB_S 16655461666682
KP1_3960_S 16666661666794
flk_S 16667931667770
KP1_3965_S 16726711672952
yfcM_S 16729841673532
yfcA_S 16735321674341
mepA_S 16743411675165
aroC_S 16751681676256
KP1_4022_S 17291501730049
KP1_4023_S 17301441730719
KP1_4024_S 17307811731230
ypeA_S 17312171731657
KP1_4027_S 17316641731804
amiA_S 17318541732726
hemF_S 17327261733625
hscB_S 18252301825745
iscA_S 18258201826143
KP1_4113_S 18261611826547
iscS_S 18265741827788
iscR_S 18279671828458
yfhQ_S 18286931829427
suhB_S 18295481830351
glyA_S 18430361844289
hmpA_S 18446151845805
KP1_4132_S 18458801846218
yfhA_S 18462841847621
yfhG_S 18476081848315
yfhK_S 18483241849763
nadB_S 18684011870020
yfiC_S 18700051870763
srmB_S 18708741872205
yfiD_S 18722511872634
ung_S 18729471873636
1515405SPARK_2066_C1_21055244ycfW_S 1021511459 EMBL GBK
ycfV_S 1145912160
ycfU_S 1215313361
mfd_S 1365717103
ycfS_S 1726718226
ycfQ_S 1886219497
iutA 1972921930
KP1_2092_S 2773128087
ptsG2_S 2834929782
ycfH_S 3007930873
holB_S 3088431888
tmk_S 3188532526
yceG_S 3251633538
pabC_S 3354034349
fabF_S 3447535716
fabG_S 3625336987
fabD_S 3700037929
fabH_S 3794538898
plsX_S 3895240049
rpmF (50S ribosomal protein L32) 4025340426
KP1_2077_S 4044340964
yceF_S 4110641690
mdoC_S 6705668216
KP1_2048_S 6825168844
KP1_2047_S 6891169456
ycdZ_S 6958870070
KP1_2044_S 7075171488
pyrD_S 148481149518
ssuE_S 149741150316
ssuA_S 150309151271
ssuD_S 151268152413
ssuC_S 152424153215
KP1_1916_S 182571183800
msbA_S 184832186580
ihfB_S 189087189374
rpsA (30S ribosomal protein S1) 189526191199
ybjE_S 231864232763
hcp_S 232907234559
hcr_S 234570235538
KP1_1855_S 250609251325
KP1_1853_S 252573253061
potI_S 253119254006
potH_S 253961254914
ybiR_S 304443305555
mntR_S 305552306025
KP1_1803_S 306211306336
ybiP_S 306596308185
ompX_S 308276308788
ybiF_S 309140310027
dps_S 310265310768
glnH_S 311177311923
KP1_1734_S 374841375764
KP1_1732_S 376870377235
KP1_1731_S 377317377871
KP1_1730_S 377913378647
KP1_1729_S 378803380014
KP1_1728_S 380344380589
KP1_1727_S 380717381022
KP1_1726_S 381074381340
ybhE_S 381451382446
ybhA_S 382675383493
tolR_S 405123405551
tolQ_S 405555406247
KP1_1697_S 406244406648
KP1_1696_S 406798407088
cydB_S 407220408359
cydA_S 408375409946
KP1_1663_S 442721443413
ybfF_S 443453444226
KP1_1661_S 444291444653
fldA_S 444736445335
fur_S 445627446079
KP1_1657_S 446695447027
KP1_1656_S 447075447575
metH_S 448552448860
glnS_S 448914450581
nagE_S 450760452715
nagB_S 453030453830
nagA_S 453944455092
nagC_S 455101456321
nagD_S 456438457190
rlpB_S 478205478795
holA_S 478804479826
nadD_S 479816480469
KP1_1624_S 481394481711
KP1_1623_S 481715482182
ybeF_S 488932489936
lipA_S 490117491082
tatE_S 491273491479
ybeM_S 491722492510
KP1_1612_S 492600492983
cspE_S 493051493344
pagP_S 493455493973
dcuC_S 494312495685
KP1_1607_S 495778496575
ykfE_S 584216584743
betT_S 584789586822
betB_S 587552589024
betA_S 588993590702
fsr_S 786617787837
ybaL_S 788063789739
gsk_S 789775791079
hemH_S 791143792105
adk_S 792234792878
rpmJ (50S ribosomal protein L36) 814234814374
rpmE2_S 814374814637
rpmE (50S ribosomal protein L31) 814374814637
lacI_S 814753815823
ptsG_S 817502817816
KP1_1275_S 846310846678
ppiD_S 846827848701
hupB_S 848916849188
lon_S 849398851860
clpX_S 851936853210
clpP_S 853461854084
tig_S 854394855692
KP1_1251_S 870147870965
KP1_1248_S 872672873850
yajR_S 874010875374
KP1_1246_S 875419876003
apbA_S 876102877013
thiJ_S 876970877569
nrdR_S 887540887989
yajI_S 888137888676
tsx_S 888975889859
KP1_1228_S 889914890609
KP1_1227_S 890633890998
KP1_1211_S 901760902626
KP1_1209_S 904578905123
KP1_1207_S 905310905951
KP1_1206_S 906218907120
phoE 974236974655
crl_S 10245951024993
frsA_S 10250511026295
gpt_S 10264011026859
pepD_S 10271171028574
yafP_S 10286171029069
yafE_S 10497521050522
KP1_1068_S 10506141051420
yafC_S 10528091053714
dkgB_S 10537601054563
1515414SPARK_2066_C1_3722910rplS (50S ribosomal protein L19) 1548615833 EMBL GBK
rpsP (30S ribosomal protein S16) 1723917487
grpE_S 2149222082
ppnK_S 2220723085
smpA_S 2498125322
KP1_4196_S 2538925679
KP1_4197_S 2566926145
smpB_S 2625626738
ygaH_S 8437084705
emrR_S 8482685326
emrA_S 8545286624
KP1_4281_S 8831589991
cbiQ_S 251978252655
KP1_4452_S 252642252923
KP1_4453_S 252925253662
KP1_4455_S 254369255163
KP1_4456_S 255174255959
KP1_4457_S 255956256681
pduW_S 281352282566
pduX_S 282622283524
cobD_S 283528284604
amiC_S 284622285911
argA_S 286103287434
ppdA_S 301078301545
thyA_S 301815302609
lgt_S 302616303491
ptsP_S 303737305983
ygdP_S 305996306526
galR_S 314354315370
KP1_4520_S 315331315810
KP1_4521_S 315807316580
KP1_4523_S 316648318075
KP1_4524_S 318083319483
mrkH 344998345702
mrkI 345708346292
mrkJ 346436347152
mrkF 347187347822
mrkD 347836348831
mrkC 348822351308
mrkB 351320352021
mrkA 352117352725
dsbC_S 392631393344
xerD_S 393367394263
fldB_S 394364394885
KP1_4612_S 394892395302
KP1_4613_S 395283395549
yqfA_S 396929397588
KP1_4617_S 397752398063
KP1_4618_S 398113398841
KP1_4629_S 409980411182
pepP_S 412368413684
KP1_4632_S 413708414292
KP1_4633_S 414453414782
yggE_S 419062419829
yggA_S 419919420554
yggB_S 420706421563
fbaA_S 421754422833
pgk_S 422931424094
epd_S 424134425162
KP1_4652_S 436017436517
endA_S 436555437319
KP1_4654_S 437336438142
gshB_S 438163439113
KP1_4657_S 439288439851
yqgF_S 439851440267
KP1_4731_S 499463500134
ygiC_S 500140501300
ygiD_S 501345502136
ygiE_S 502323503093
ribB_S 503155503808
uppP_S 512708513529
folB_S 513728514114
KP1_4750_S 514219514836
ureD_S 515234516058
ureA_S 516068516370
ureB_S 516380516700
rpsU (30S ribosomal protein S21) 523241523456
KP1_4812_S 569289569789
ygjR_S 569863570852
ygjT_S 571124572095
ygjU_S 572362573609
KP1_4816_S 573625574179
KP1_4822_S 580919581302
KP1_4823_S 581452581820
KP1_4824_S 581866582171
KP1_4825_S 582174582572
KP1_4826_S 582569582865
KP1_4861_S 611057611443
yraO_S 611433612059
yraP_S 612069612644
KP1_4865_S 612766613806
yhbO_S 614529615194
KP1_4868_S 615156615599
KP1_4870_S 615926616429
KP1_4871_S 616423616947
yhbU_S 617169618164
yhbV_S 618155619048
yhbW_S 619192620199
rpsO (30S ribosomal protein S15) 627113627382
infB 630023630340
rpmA (50S ribosomal protein L27) 648486648743
rplU (50S ribosomal protein L21) 648764649075
yrbI_S 657842658408
KP1_4921_S 658405658980
yhbN_S 658949659494
yhbG_S 659501660226
rpoN_S 660274661707
yhbH_S 661730662017
ptsN_S 662088662576
KP1_4927_S 662622663476
ptsO_S 663473663745
rpsI (30S ribosomal protein S9) 681528681920
rplM (50S ribosomal protein L13) 681936682364
mdh 687428687904
KP1_4977_S 706966707157
KP1_4978_S 707372708388
KP1_4979_S 708388708996
KP1_4980_S 709220709672
accB_S 709695710162
accC_S 710173711522
KP1_4984_S 711633711875
prmA_S 713328714209
KP1_4987_S 714179714409
1515404SPARK_2066_C1_4377799rpsG (30S ribosomal protein S7) 25453015 EMBL GBK
rpsL (30S ribosomal protein S12) 31123486
yheS_S 1030012204
yheT_S 1240813430
KP1_5068_S 1342713645
prkB_S 1368214551
KP1_5070_S 1460615010
crp_S 1531715949
pabA_S 1938019943
KP1_5075_S 1997620578
KP1_5076_S 2056820735
ppiA_S 2084221411
yhfC_S 2168822875
nirD_S 2697227298
cysG_S 2745228825
trpS_S 2889829902
gph_S 2989530656
rpe_S 3064931326
dam_S 3134432171
aroB_S 3362134715
aroK_S 3477135292
glgA_S 7641277845
glgC_S 7784579140
glgX_S 7922181101
glgB_S 8119483380
asd_S 8361884772
pitA_S 142798144294
yhiO_S 144350144685
uspA_S 145068145505
yhiP_S 145762147234
prlC_S 148140150182
KP1_5210_S 157972158541
KP1_5213_S 160460161491
KP1_5258_S 215909216658
KP1_5259_S 216662217597
KP1_5260_S 217702218982
tkrA_S 219007219978
KP1_5262_S 220087220797
secB_S 262823263290
grxC_S 263351263602
yibN_S 263707264138
yibO_S 264303265928
KP1_5307_S 265938267209
KP1_5309_S 267213268160
rpmG (50S ribosomal protein L33) 286882287049
rpmB (50S ribosomal protein L28) 287070287306
sbp_S 318053319042
KP1_5367_S 319194319439
glpF_S 319882320733
glpK_S 320755322266
gltS_S 322381323211
yicE_S 323859325259
1515403SPARK_2066_C1_5369891ispC_S 2906030262 EMBL GBK
frr_S 3049131048
pyrH_S 3119931924
tsf_S 3207532926
rpsB (30S ribosomal protein S2) 3304633771
map_S 3409434888
sfsA_S 7807478790
dksA_S 7893579408
yadB_S 7946880349
folK_S 8180382282
KP1_0965_S 8456985816
yadI_S 8588186321
yadH_S 8644487214
yadG_S 8721188137
hpt_S 8904489592
KP1_0946_S 104568105383
KP1_0945_S 105429105713
lpdA_S 105878107305
KP1_0936_S 115200116606
KP1_0935_S 116606117556
ampE_S 117792118646
ampD_S 118643119206
nadC_S 119340120233
ppdD_S 120415120846
guaC_S 123474124517
KP1_0927_S 124574124705
coaE_S 124861125481
KP1_0925_S 125481126224
yacG_S 126234126428
mutT_S 126481126873
ftsI_S 144844146610
ftsL_S 146626146991
mraW_S 146988147929
KP1_0903_S 147932148426
fruR_S 149031150035
ilvH_S 150216150737
ilvI_S 150710152434
gudP_S 165755167065
setA_S 167099168283
KP1_0882_S 168551168709
yabN_S 168791170446
tbpA_S 170775171719
yabI_S 173977174744
araC_S 174873175718
araB_S 176056177765
araA_S 177776179278
araD_S 179416180111
pdxA_S 196005196994
ksgA_S 196991197812
apaG_S 197815198192
apaH_S 198197199045
folA_S 199297199776
kefC_S 199950201815
yabF_S 201808202341
rpsT (30S ribosomal protein S20) 230212230475
thrB_S 245915246844
thrA_S 246846249350
lasT_S 249670250356
arcA_S 250989251705
creC_S 253187254611
creB_S 254611255300
yjjK_S 260709262376
nadR_S 262470263702
sms_S 263724265106
serB_S 265116266108
smp_S 266192266839
lplA_S 266839267855
KP1_0801_S 267936268655
deoB_S 268758269981
deoA_S 270034271356
prfC_S 277223278812
yjjG_S 278903279580
rimI_S 279595280041
holD_S 280010280423
mtr_S 282067282420
ycdT_S 282570283616
fhuF_S 283723284511
KP1_0776_S 288330289211
KP1_0775_S 289228290412
yjjP_S 290692291468
yjjB_S 291444291932
dnaT_S 292035292574
dnaC_S 292577293314
yjjA_S 293380293871
1515413SPARK_2066_C1_6345930silR 40794759 EMBL GBK
yjgB_S 3756238581
KP1_0569_S 3871239596
KP1_0568_S 3958640473
KP1_0567_S 4048441308
KP1_0517_S 9101091750
KP1_0516_S 9173592838
KP1_0515_S 9174792865
KP1_0514_S 9284993982
rplI (50S ribosomal protein L9) 136464136913
rpsR (30S ribosomal protein S18) 136955137182
priB_S 137187137354
rpsF (30S ribosomal protein S6) 137507137902
KP1_0467_S 138243138518
KP1_0446_S 155282155479
KP1_0445_S 155651155992
hflC_S 156075157079
hflK_S 157082158344
hflX_S 158410159690
hfq_S 159766160074
frdD_S 181235181624
blc_S 181738182271
sugE_S 182268182585
ecnB_S 182729182875
ecnA_S 183035183166
efp_S 183240183806
hmsS_S 218259218708
KP1_0379_S 218754219587
KP1_0378_S 219750220448
cbpA_S 220594221511
KP1_0375_S 221496221816
ssb_S 292180292704
uvrA_S 292956295781
KP1_0300_S 295782296138
KP1_0299_S 296142296558
pgi 325475325906
iclR_S 337955338881
aceK_S 338932340716
aceA_S 340819342138
metA_S 344065344994
yjaB_S 345151345612
1515411SPARK_2066_C1_7100962rpmH (50S ribosomal protein L34) 5105151191 EMBL GBK
atpF_S 7951579979
atpE_S 8003680275
atpB_S 8032581140
atpI_S 8114881600
gidB_S 8214582768
rbsC_S 9445895423
rbsB_S 9545196341
rbsK_S 9644597374
yieP_S 99777100478
1515407SPARK_2066_C1_893331KP1_0122_S 4051256 EMBL GBK
btuB_S 12013039
KP1_0120_S 30823204
trmA_S 34064506
KP1_0118_S 45584917
yijC_S 49335565
rpmE (50S ribosomal protein L31) 2919829410
cpxP_S 3991540418
cpxR_S 4056841266
cpxA_S 4126342636
KP1_0077_S 4270443378
sodA_S 4345144077
rhaT_S 4436145395
rhaR_S 4542846273
rhaS_S 4634747183
rhaB_S 4749448960
rhaA_S 4895150216
rhaD_S 5036651196
bipA_S 7561477437
glnA_S 7781679225
glnL_S 7941480463
glnG_S 8047281881
hemN_S 8213883511
KP1_0026_S 8370084206
engB_S 8479085422
polA_S 8577088571
1515406SPARK_2066_C1_993122ilvM_S 54465703 EMBL GBK
ilvE_S 57206649
ilvD_S 67108560
ilvA_S 862010107
ilvY_S 1010411078
cyaY_S 4633146651
KP1_0167_S 4679847001
dapF_S 4703447861
KP1_0169_S 4785848565
xerC_S 4856249464
yigB_S 4946450180
rhtB_S 5987960499
pldB_S 6060961601
KP1_0183_S 6164662446
yigM_S 6253563434
metR_S 6332264275
udp_S 7433475095
yigN_S 7523176679
ubiE_S 7675077505
KP1_0193_S 7751978124
ubiB_S 7812179761
tatA_S 7984380142
tatB_S 8014680682
tatC_S 8068581464
tatD_S 8150982300
rfaH_S 8229782785
ubiD_S 8296484439
fre_S 8448985190
fadA_S 8529786460
1515410SPARK_2066_C1_1034658rplK (50S ribosomal protein L11) 16052033 EMBL GBK
rplA (50S ribosomal protein L1) 20372741
rplJ (50S ribosomal protein L10) 31553652
rplL (50S ribosomal protein L7/L12) 37194084
rpoB 60656565
rsd_S 2279623293
nudC_S 2338724160
hemE_S 2420125265
nfi_S 2527825949
KP1_0239_S 2599226582
KP1_0241_S 2676927041
KP1_0242_S 2704827749
zraP_S 2775328190
1515415SPARK_2066_C1_1126445rpsJ (30S ribosomal protein S10) 19482259 EMBL GBK
rplC (50S ribosomal protein L3) 22922921
rplD (50S ribosomal protein L4) 29323537
rplW (50S ribosomal protein L23) 35343836
rplB (50S ribosomal protein L2) 38544675
rpsS (30S ribosomal protein S19) 46924970
rplV (50S ribosomal protein L22) 49855317
rpsC (30S ribosomal protein S3) 53356033
rplP (50S ribosomal protein L16) 60466456
rpmC (50S ribosomal protein L29) 64566647
rpsQ (30S ribosomal protein S17) 66476901
rplN (50S ribosomal protein L14) 70677438
rplX (50S ribosomal protein L24) 74497763
rplE (50S ribosomal protein L5) 77788317
rpsN (30S ribosomal protein S14) 83328637
rpsH (30S ribosomal protein S8) 86719063
rplF (50S ribosomal protein L6) 90769609
rplR (50S ribosomal protein L18) 96199972
rpsE (30S ribosomal protein S5) 998710490
rpmD (50S ribosomal protein L30) 1049410673
rplO (50S ribosomal protein L15) 1067711111
secY_S 1111912450
rpmJ (50S ribosomal protein L36) 1248412600
rpsM (30S ribosomal protein S13) 1274713103
rpsK (30S ribosomal protein S11) 1312013509
rpsD (30S ribosomal protein S4) 1354314163
KP1_5015_S 1418915178
rplQ (50S ribosomal protein L17) 1521915605
KP1_5012_S 1571416082
def_S 2103621545
smf_S 2167422798
KP1_5003_S 2277023243
yrdD_S 2327023812
yrdC_S 2377224389
aroE_S 2439325211
KP1_4999_S 2520825465
yrdA_S 2544125995
1515412 SPARK_2066_C1_12 5406
1515408 SPARK_2066_C1_13 2682