Sequence bin for SPARK_1980_C1

Contig summary statistics

Contigs
13
Total length
5,113,460
Minimum length
437
Maximum length
1,883,773
Mean length
393,344
N50
1,045,274
L50
2
N90
324,433
L90
6
N95
93,367
L95
7

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1513029SPARK_1980_C1_11883773yeaE_S 114336115220 EMBL GBK
KP1_2220_S 115277116161
gapA 116539116988
yeaA_S 117570117983
KP1_2224_S 118027118305
KP1_2225_S 118400118744
spy_S 156719157201
nadE_S 158253159080
osmE_S 159363159701
celA_S 159980160300
celC_S 161860162207
KP1_2532_S 396383396718
ydgB_S 396715397437
ydgI_S 397474398856
KP1_2535_S 399034399984
KP1_2536_S 399981400163
blaSHV (SHV beta-lactamase) 482929483786
KP1_2672_S 516989517933
KP1_2673_S 518078518560
yneJ_S 518514519392
yneI_S 519989520882
yneH_S 520963521889
KP1_2697_S 535527536198
KP1_2700_S 537801538829
KP1_2702_S 539397539708
KP1_2703_S 539885540640
gst_S 873445874050
pdxY_S 874093874953
tyrS_S 875015876289
pdxH_S 876414877070
KP1_3049_S 877128877451
anmK_S 877544878641
ydhM_S 886712887311
nemA_S 887365888462
gloA_S 888541888948
KP1_3065_S 889781890128
ydhO_S 890469891341
rplT (50S ribosomal protein L20) 10825551082911
rpmI (50S ribosomal protein L35) 10829621083159
KP1_3289_S 10866641087422
pfkB_S 10877791088711
KP1_3291_S 10888061089090
tonB 10902921090705
chaC_S 11401601140840
chaB_S 11409771141207
chaA_S 11414711142571
kdsA_S 11426581143512
ychQ_S 11443681144760
hemK_S 11447601145608
prfA_S 11456081146690
KP1_3440_S 12248351225281
ycgM_S 12253761226035
KP1_3442_S 12260521226372
minC_S 12264601227158
minD_S 12271821227994
minE_S 12279981228267
fadD_S 12295421231227
yeaY_S 12314331232014
yeaZ_S 12320531232748
KP1_3451_S 12349361235280
KP1_3486_S 12687241269107
holE_S 12692111269441
exoX_S 12695201270179
ptrB_S 12701831272243
KP1_3490_S 12723641273023
yebG_S 12731631273510
purT_S 12736551274833
msbB_S 12819141282888
KP1_3501_S 12830061284325
znuA_S 12843411285411
znuC_S 12853641286116
znuB_S 12861161286901
ruvB_S 12869651287975
ruvA_S 12879841288595
ftnA_S 13152111315708
KP1_3536_S 13157441315983
tyrP_S 13161751317386
KP1_3538_S 13174111318079
dapA4_S 13181781319059
KP1_3551_S 13296571330088
rcsA_S 13304641331087
KP1_3553_S 13311201331311
KP1_3554_S 13314421331666
yedI_S 13337611334672
wzi (Wzi outer membrane protein of cps cluster) 14272691427715
mglA_S 15180941519614
mglB_S 15197331520731
galS_S 15210281522050
folE_S 15233791524047
yejE_S 15509511551976
KP1_3844_S 15535711553915
bcr_S 15542471555443
rsuA_S 15554401556159
KP1_3852_S 15608411561476
KP1_3853_S 15615201562281
yejK_S 15623011563308
KP1_3855_S 15634951563722
yejM_S 15637411565501
nuoF_S 16269371628274
nuoE_S 16282711628771
nuoC_S 16287741630582
nuoB_S 16306691631343
nuoA_S 16313591631805
yfcD_S 16437971644348
yfcF_S 16450201645658
yfcG_S 16458391646468
folX_S 16465341646896
accD_S 16578941658877
dedA_S 16590001659659
truA_S 16596861660498
KP1_3958_S 16604981661511
pdxB_S 16615751662711
KP1_3960_S 16626951662823
flk_S 16628221663799
KP1_3965_S 16687001668981
yfcM_S 16690131669561
yfcA_S 16695611670370
mepA_S 16703701671194
aroC_S 16711971672285
KP1_4022_S 17251761726075
KP1_4023_S 17261701726745
KP1_4024_S 17268071727256
ypeA_S 17272431727683
KP1_4027_S 17276901727830
amiA_S 17278801728752
hemF_S 17287521729651
hscB_S 18212561821771
iscA_S 18218461822169
KP1_4113_S 18221871822573
iscS_S 18226001823814
iscR_S 18239931824484
yfhQ_S 18247191825453
suhB_S 18255741826377
glyA_S 18390621840315
hmpA_S 18406411841831
KP1_4132_S 18419061842244
yfhA_S 18423101843647
yfhG_S 18436341844341
yfhK_S 18443501845789
nadB_S 18644271866046
yfiC_S 18660311866789
srmB_S 18669001868231
yfiD_S 18682771868660
ung_S 18689731869662
1513032SPARK_1980_C1_21045274dkgB_S 15892392 EMBL GBK
yafC_S 24383343
KP1_1068_S 47325538
yafE_S 56306400
yafP_S 2708327535
pepD_S 2757829035
gpt_S 2929329751
frsA_S 2985731101
crl_S 3115931557
phoE 7221372632
KP1_1206_S 139748140650
KP1_1207_S 140917141558
KP1_1209_S 141745142290
KP1_1211_S 144242145108
KP1_1227_S 155870156235
KP1_1228_S 156259156954
tsx_S 157009157893
yajI_S 158192158731
nrdR_S 158879159328
thiJ_S 169299169898
apbA_S 169855170766
KP1_1246_S 170865171449
yajR_S 171494172858
KP1_1248_S 173018174196
KP1_1251_S 175903176721
tig_S 191174192472
clpP_S 192782193405
clpX_S 193656194930
lon_S 195006197468
hupB_S 197678197950
ppiD_S 198165200039
KP1_1275_S 200188200556
ptsG_S 229050229364
lacI_S 231043232113
rpmE (50S ribosomal protein L31) 232229232492
rpmE2_S 232229232492
rpmJ (50S ribosomal protein L36) 232492232632
adk_S 253988254632
hemH_S 254761255723
gsk_S 255787257091
ybaL_S 257127258803
fsr_S 259029260249
betA_S 454937456646
betB_S 456615458087
betT_S 458817460850
ykfE_S 460896461423
KP1_1607_S 549064549861
dcuC_S 549954551327
pagP_S 551666552184
cspE_S 552295552588
KP1_1612_S 552656553039
ybeM_S 553129553917
tatE_S 554160554366
lipA_S 554557555522
ybeF_S 555703556707
KP1_1623_S 563457563924
KP1_1624_S 563928564245
nadD_S 565170565823
holA_S 565813566835
rlpB_S 566844567434
nagD_S 588449589201
nagC_S 589318590538
nagA_S 590547591695
nagB_S 591809592609
nagE_S 592924594879
glnS_S 595058596725
metH_S 596779597087
KP1_1656_S 598064598564
KP1_1657_S 598612598944
fur_S 599560600012
fldA_S 600304600903
KP1_1661_S 600986601348
ybfF_S 601413602186
KP1_1663_S 602226602918
cydA_S 635693637264
cydB_S 637280638419
KP1_1696_S 638551638841
KP1_1697_S 638991639395
tolQ_S 639392640084
tolR_S 640088640516
ybhA_S 662146662964
ybhE_S 663193664188
KP1_1726_S 664299664565
KP1_1727_S 664617664922
KP1_1728_S 665050665295
KP1_1729_S 665625666836
KP1_1730_S 666992667726
KP1_1731_S 667768668322
KP1_1732_S 668404668769
KP1_1734_S 669875670798
glnH_S 733716734462
dps_S 734871735374
ybiF_S 735612736499
ompX_S 736851737363
ybiP_S 737454739043
KP1_1803_S 739303739428
mntR_S 739614740087
ybiR_S 740084741196
potH_S 790725791678
potI_S 791633792520
KP1_1853_S 792578793066
KP1_1855_S 794314795030
hcr_S 810101811069
hcp_S 811080812732
ybjE_S 812876813775
rpsA (30S ribosomal protein S1) 854440856113
ihfB_S 856265856552
msbA_S 859059860807
KP1_1916_S 861839863068
ssuC_S 892424893215
ssuD_S 893226894371
ssuA_S 894368895330
ssuE_S 895323895898
pyrD_S 896121897158
KP1_2044_S 973789974526
ycdZ_S 975207975689
KP1_2047_S 975821976366
KP1_2048_S 976433977026
mdoC_S 977061978221
yceF_S 10035861004170
KP1_2077_S 10043121004833
rpmF (50S ribosomal protein L32) 10048501005023
plsX_S 10052271006324
fabH_S 10063781007331
fabD_S 10073471008276
fabG_S 10082891009023
fabF_S 10095601010801
pabC_S 10109271011736
yceG_S 10117381012760
tmk_S 10127501013391
holB_S 10133881014392
ycfH_S 10144031015197
ptsG2_S 10154941016927
KP1_2092_S 10171891017545
iutA 10233461025547
ycfQ_S 10257791026414
ycfS_S 10270501028009
mfd_S 10281731031619
ycfU_S 10319151033123
ycfV_S 10331161033817
ycfW_S 10338171035061
1513024SPARK_1980_C1_3735939rplS (50S ribosomal protein L19) 1547715824 EMBL GBK
rpsP (30S ribosomal protein S16) 1723017478
grpE_S 2148322073
ppnK_S 2219823076
smpA_S 2497225313
KP1_4196_S 2538025670
KP1_4197_S 2566026136
smpB_S 2624726729
ygaH_S 8437984714
emrR_S 8483585335
emrA_S 8546186633
KP1_4281_S 8832490000
cbiQ_S 252214252891
KP1_4452_S 252878253159
KP1_4453_S 253161253898
KP1_4455_S 254605255399
KP1_4456_S 255410256195
KP1_4457_S 256192256917
pduW_S 281588282802
pduX_S 282858283760
cobD_S 283764284840
amiC_S 284858286147
argA_S 286339287670
ppdA_S 301314301781
thyA_S 302051302845
lgt_S 302852303727
ptsP_S 303973306219
ygdP_S 306232306762
galR_S 314590315606
KP1_4520_S 315567316046
KP1_4521_S 316043316816
KP1_4523_S 316884318311
KP1_4524_S 318319319719
mrkH 345234345938
mrkI 345944346528
mrkJ 346672347388
mrkF 347423348058
mrkD 348072349067
mrkC 349058351544
mrkB 351556352257
mrkA 352353352961
dsbC_S 392867393580
xerD_S 393603394499
fldB_S 394600395121
KP1_4612_S 395128395538
KP1_4613_S 395519395785
yqfA_S 397165397824
KP1_4617_S 397988398299
KP1_4618_S 398349399077
KP1_4629_S 410216411418
pepP_S 412604413920
KP1_4632_S 413944414528
KP1_4633_S 414689415018
yggE_S 419298420065
yggA_S 420155420790
yggB_S 420942421799
fbaA_S 421990423069
pgk_S 423167424330
epd_S 424370425398
KP1_4652_S 436253436753
endA_S 436791437555
KP1_4654_S 437572438378
gshB_S 438399439349
KP1_4657_S 439524440087
yqgF_S 440087440503
KP1_4731_S 499699500370
ygiC_S 500376501536
ygiD_S 501581502372
ygiE_S 502559503329
ribB_S 503391504044
uppP_S 512944513765
folB_S 513964514350
KP1_4750_S 514455515072
ureD_S 515470516294
ureA_S 516304516606
ureB_S 516616516936
rpsU (30S ribosomal protein S21) 523477523692
KP1_4812_S 569525570025
ygjR_S 570099571088
ygjT_S 571360572331
ygjU_S 572598573845
KP1_4816_S 573861574415
KP1_4822_S 581155581538
KP1_4823_S 581688582056
KP1_4824_S 582102582407
KP1_4825_S 582410582808
KP1_4826_S 582805583101
KP1_4861_S 624150624536
yraO_S 624526625152
yraP_S 625162625737
KP1_4865_S 625859626899
yhbO_S 627622628287
KP1_4868_S 628249628692
KP1_4870_S 629019629522
KP1_4871_S 629516630040
yhbU_S 630262631257
yhbV_S 631248632141
yhbW_S 632285633292
rpsO (30S ribosomal protein S15) 640206640475
infB 643116643433
rpmA (50S ribosomal protein L27) 661579661836
rplU (50S ribosomal protein L21) 661857662168
yrbI_S 670935671501
KP1_4921_S 671498672073
yhbN_S 672042672587
yhbG_S 672594673319
rpoN_S 673367674800
yhbH_S 674823675110
ptsN_S 675181675669
KP1_4927_S 675715676569
ptsO_S 676566676838
rpsI (30S ribosomal protein S9) 694621695013
rplM (50S ribosomal protein L13) 695029695457
mdh 700521700997
KP1_4977_S 720059720250
KP1_4978_S 720465721481
KP1_4979_S 721481722089
KP1_4980_S 722313722765
accB_S 722788723255
accC_S 723266724615
KP1_4984_S 724726724968
prmA_S 726421727302
KP1_4987_S 727272727502
1513026SPARK_1980_C1_4479089rpsG (30S ribosomal protein S7) 25353005 EMBL GBK
rpsL (30S ribosomal protein S12) 31023476
yheS_S 1029012194
yheT_S 1239813420
KP1_5068_S 1341713635
prkB_S 1367214541
KP1_5070_S 1459615000
crp_S 1530715939
pabA_S 1937019933
KP1_5075_S 1996620568
KP1_5076_S 2055820725
ppiA_S 2083221401
yhfC_S 2167822865
nirD_S 2696227288
cysG_S 2744228815
trpS_S 2888829892
gph_S 2988530646
rpe_S 3063931316
dam_S 3133432161
aroB_S 3361134705
aroK_S 3476135282
glgA_S 7640177834
glgC_S 7783479129
glgX_S 7921081090
glgB_S 8118383369
asd_S 8360784761
pitA_S 142787144283
yhiO_S 144339144674
uspA_S 145057145494
yhiP_S 145751147223
prlC_S 148129150171
KP1_5210_S 157961158530
KP1_5213_S 160449161480
KP1_5258_S 215733216482
KP1_5259_S 216486217421
KP1_5260_S 217526218806
tkrA_S 218831219802
KP1_5262_S 219911220621
secB_S 262647263114
grxC_S 263175263426
yibN_S 263531263962
yibO_S 264127265752
KP1_5307_S 265762267033
KP1_5309_S 267037267984
rpmG (50S ribosomal protein L33) 286706286873
rpmB (50S ribosomal protein L28) 286894287130
sbp_S 317877318866
KP1_5367_S 319018319263
glpF_S 319706320557
glpK_S 320579322090
gltS_S 322205323035
yicE_S 323683325083
rpmH (50S ribosomal protein L34) 429192429332
atpF_S 457656458120
atpE_S 458177458416
atpB_S 458466459281
atpI_S 459289459741
gidB_S 460286460909
rbsC_S 472599473564
rbsB_S 473592474482
rbsK_S 474586475515
yieP_S 477918478619
1513030SPARK_1980_C1_5370212ispC_S 2904330245 EMBL GBK
frr_S 3047431031
pyrH_S 3118231907
tsf_S 3205832909
rpsB (30S ribosomal protein S2) 3302933754
map_S 3407734871
sfsA_S 7805778773
dksA_S 7891879391
yadB_S 7945180332
folK_S 8178682265
KP1_0965_S 8455285799
yadI_S 8586486304
yadH_S 8642787197
yadG_S 8719488120
hpt_S 8902789575
KP1_0946_S 104887105702
KP1_0945_S 105748106032
lpdA_S 106197107624
KP1_0936_S 115519116925
KP1_0935_S 116925117875
ampE_S 118111118965
ampD_S 118962119525
nadC_S 119659120552
ppdD_S 120734121165
guaC_S 123793124836
KP1_0927_S 124893125024
coaE_S 125180125800
KP1_0925_S 125800126543
yacG_S 126553126747
mutT_S 126800127192
ftsI_S 145163146929
ftsL_S 146945147310
mraW_S 147307148248
KP1_0903_S 148251148745
fruR_S 149350150354
ilvH_S 150535151056
ilvI_S 151029152753
gudP_S 166074167384
setA_S 167418168602
KP1_0882_S 168870169028
yabN_S 169110170765
tbpA_S 171094172038
yabI_S 174296175063
araC_S 175192176037
araB_S 176375178084
araA_S 178095179597
araD_S 179735180430
pdxA_S 196324197313
ksgA_S 197310198131
apaG_S 198134198511
apaH_S 198516199364
folA_S 199616200095
kefC_S 200269202134
yabF_S 202127202660
rpsT (30S ribosomal protein S20) 230531230794
thrB_S 246234247163
thrA_S 247165249669
lasT_S 249989250675
arcA_S 251308252024
creC_S 253506254930
creB_S 254930255619
yjjK_S 261028262695
nadR_S 262789264021
sms_S 264043265425
serB_S 265435266427
smp_S 266511267158
lplA_S 267158268174
KP1_0801_S 268255268974
deoB_S 269077270300
deoA_S 270353271675
prfC_S 277542279131
yjjG_S 279222279899
rimI_S 279914280360
holD_S 280329280742
mtr_S 282386282739
ycdT_S 282889283935
fhuF_S 284042284830
KP1_0776_S 288649289530
KP1_0775_S 289547290731
yjjP_S 291011291787
yjjB_S 291763292251
dnaT_S 292354292893
dnaC_S 292896293633
yjjA_S 293699294190
1513027SPARK_1980_C1_6324433yjgB_S 1610317122 EMBL GBK
KP1_0569_S 1725318137
KP1_0568_S 1812719014
KP1_0567_S 1902519849
KP1_0517_S 6952970269
KP1_0516_S 7025471357
KP1_0515_S 7026671384
KP1_0514_S 7136872501
rplI (50S ribosomal protein L9) 114983115432
rpsR (30S ribosomal protein S18) 115474115701
priB_S 115706115873
rpsF (30S ribosomal protein S6) 116026116421
KP1_0467_S 116762117037
KP1_0446_S 133801133998
KP1_0445_S 134170134511
hflC_S 134594135598
hflK_S 135601136863
hflX_S 136929138209
hfq_S 138285138593
frdD_S 159754160143
blc_S 160257160790
sugE_S 160787161104
ecnB_S 161248161394
ecnA_S 161554161685
efp_S 161759162325
hmsS_S 196762197211
KP1_0379_S 197257198090
KP1_0378_S 198253198951
cbpA_S 199097200014
KP1_0375_S 199999200319
ssb_S 270683271207
uvrA_S 271459274284
KP1_0300_S 274285274641
KP1_0299_S 274645275061
pgi 303978304409
iclR_S 316458317384
aceK_S 317435319219
aceA_S 319322320641
metA_S 322568323497
yjaB_S 323654324115
1513023SPARK_1980_C1_793367KP1_0122_S 3901241 EMBL GBK
btuB_S 11863024
KP1_0120_S 30673189
trmA_S 33914491
KP1_0118_S 45434902
yijC_S 49185550
rpmE (50S ribosomal protein L31) 2918329395
cpxP_S 3990040403
cpxR_S 4055341251
cpxA_S 4124842621
KP1_0077_S 4268943363
sodA_S 4343644062
rhaT_S 4434645380
rhaR_S 4541346258
rhaS_S 4633247168
rhaB_S 4747948945
rhaA_S 4893650201
rhaD_S 5035151181
bipA_S 7559977422
glnA_S 7780179210
glnL_S 7939980448
glnG_S 8045781866
hemN_S 8212383496
KP1_0026_S 8368584191
engB_S 8477585407
polA_S 8575588547
1513033SPARK_1980_C1_893109ilvM_S 54485705 EMBL GBK
ilvE_S 57226651
ilvD_S 67128562
ilvA_S 862210109
ilvY_S 1010611080
cyaY_S 4633346653
KP1_0167_S 4680047003
dapF_S 4703647863
KP1_0169_S 4786048567
xerC_S 4856449466
yigB_S 4946650182
rhtB_S 5988160501
pldB_S 6061161603
KP1_0183_S 6164862448
yigM_S 6253763436
metR_S 6332464277
udp_S 7433675097
yigN_S 7523376681
ubiE_S 7675277507
KP1_0193_S 7752178126
ubiB_S 7812379763
tatA_S 7984580144
tatB_S 8014880684
tatC_S 8068781466
tatD_S 8151182302
rfaH_S 8229982787
ubiD_S 8296684441
fre_S 8449185192
fadA_S 8529986462
1513031SPARK_1980_C1_934645rplK (50S ribosomal protein L11) 15922020 EMBL GBK
rplA (50S ribosomal protein L1) 20242728
rplJ (50S ribosomal protein L10) 31423639
rplL (50S ribosomal protein L7/L12) 37064071
rpoB 60526552
rsd_S 2278323280
nudC_S 2337424147
hemE_S 2418825252
nfi_S 2526525936
KP1_0239_S 2597926569
KP1_0241_S 2675627028
KP1_0242_S 2703527736
zraP_S 2774028177
1513022SPARK_1980_C1_1031910rpsJ (30S ribosomal protein S10) 72127523 EMBL GBK
rplC (50S ribosomal protein L3) 75568185
rplD (50S ribosomal protein L4) 81968801
rplW (50S ribosomal protein L23) 87989100
rplB (50S ribosomal protein L2) 91189939
rpsS (30S ribosomal protein S19) 995610234
rplV (50S ribosomal protein L22) 1024910581
rpsC (30S ribosomal protein S3) 1059911297
rplP (50S ribosomal protein L16) 1131011720
rpmC (50S ribosomal protein L29) 1172011911
rpsQ (30S ribosomal protein S17) 1191112165
rplN (50S ribosomal protein L14) 1233112702
rplX (50S ribosomal protein L24) 1271313027
rplE (50S ribosomal protein L5) 1304213581
rpsN (30S ribosomal protein S14) 1359613901
rpsH (30S ribosomal protein S8) 1393514327
rplF (50S ribosomal protein L6) 1434014873
rplR (50S ribosomal protein L18) 1488315236
rpsE (30S ribosomal protein S5) 1525115754
rpmD (50S ribosomal protein L30) 1575815937
rplO (50S ribosomal protein L15) 1594116375
secY_S 1638317714
rpmJ (50S ribosomal protein L36) 1774817864
rpsM (30S ribosomal protein S13) 1801118367
rpsK (30S ribosomal protein S11) 1838418773
rpsD (30S ribosomal protein S4) 1880719427
KP1_5015_S 1945320442
rplQ (50S ribosomal protein L17) 2048320869
KP1_5012_S 2097821346
def_S 2630026809
smf_S 2693828062
KP1_5003_S 2803428507
yrdD_S 2853429076
yrdC_S 2903629653
aroE_S 2965730475
KP1_4999_S 3047230729
yrdA_S 3070531259
1513028SPARK_1980_C1_1120787silR 40794759 EMBL GBK
1513021 SPARK_1980_C1_12 485
1513025 SPARK_1980_C1_13 437