Sequence bin for SPARK_1941_C1

Contig summary statistics

Contigs
30
Total length
5,675,396
Minimum length
490
Maximum length
1,028,492
Mean length
189,180
N50
400,755
L50
5
N90
111,503
L90
13
N95
99,783
L95
15

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1512183SPARK_1941_C1_11028492dkgB_S 7311534 EMBL GBK
yafC_S 15802485
KP1_1068_S 38744680
yafE_S 47725542
yafP_S 2622526677
pepD_S 2672028177
gpt_S 2843528893
frsA_S 2899930243
crl_S 3030130699
phoE 6311763536
KP1_1206_S 129443130345
KP1_1207_S 130612131253
KP1_1209_S 131440131985
KP1_1211_S 133937134803
KP1_1227_S 145565145930
KP1_1228_S 145954146649
tsx_S 146704147588
yajI_S 147887148426
nrdR_S 148574149023
thiJ_S 158994159593
apbA_S 159550160461
KP1_1246_S 160560161144
yajR_S 161188162552
KP1_1248_S 162712163890
KP1_1251_S 165597166415
tig_S 180869182167
clpP_S 182477183100
clpX_S 183351184625
lon_S 184701187163
hupB_S 187373187645
ppiD_S 187860189734
KP1_1275_S 189883190251
ptsG_S 218798219112
lacI_S 220791221861
rpmE2_S 221977222240
rpmE (50S ribosomal protein L31) 221977222240
rpmJ (50S ribosomal protein L36) 222240222380
adk_S 243747244391
hemH_S 244520245482
gsk_S 245546246850
ybaL_S 246886248562
fsr_S 248788250008
allS 267757268680
allA 268889269371
allR 269463270281
gcl 270369272150
hyi 272164272940
glxR 273060273938
KP1_1364 273993275249
ybbW 275327276781
ybbY 278458279768
glxK 279786280931
KP1_1371 281148281930
allC 281941283176
allD 283198284247
ylbE 286239287498
ylbF 287507288310
betA_S 417078418787
betB_S 418756420228
betT_S 420958422991
ykfE_S 423037423564
KP1_1607_S 500826501623
dcuC_S 501716503089
pagP_S 503428503946
cspE_S 504057504350
KP1_1612_S 504418504801
ybeM_S 504891505679
tatE_S 505922506128
lipA_S 506319507284
ybeF_S 507465508469
KP1_1623_S 515219515686
KP1_1624_S 515690516007
nadD_S 516932517585
holA_S 517575518597
rlpB_S 518606519196
nagD_S 540211540963
nagC_S 541080542300
nagA_S 542309543457
nagB_S 543571544371
nagE_S 544686546641
glnS_S 546820548487
metH_S 548541548849
KP1_1656_S 549826550326
KP1_1657_S 550374550706
fur_S 551323551775
fldA_S 552067552666
KP1_1661_S 552749553111
ybfF_S 553176553949
KP1_1663_S 553989554681
cydA_S 587456589027
cydB_S 589043590182
KP1_1696_S 590314590604
KP1_1697_S 590754591158
tolQ_S 591155591847
tolR_S 591851592279
ybhA_S 613505614323
ybhE_S 614552615547
KP1_1726_S 615658615924
KP1_1727_S 615976616281
KP1_1728_S 616409616654
KP1_1729_S 616984618195
KP1_1730_S 618351619085
KP1_1731_S 619127619681
KP1_1732_S 619763620128
KP1_1734_S 621233622156
glnH_S 684934685680
dps_S 686089686592
ybiF_S 686830687717
ompX_S 688069688581
ybiP_S 688672690261
KP1_1803_S 690521690646
mntR_S 690832691305
ybiR_S 691302692414
potH_S 742221743174
potI_S 743129744016
KP1_1853_S 744074744562
KP1_1855_S 745810746526
hcr_S 761597762565
hcp_S 762576764228
ybjE_S 764372765271
rpsA (30S ribosomal protein S1) 805803807476
ihfB_S 807628807915
msbA_S 810422812170
KP1_1916_S 813202814431
ssuC_S 843787844578
ssuD_S 844589845734
ssuA_S 845731846693
ssuE_S 846686847261
pyrD_S 847484848521
KP1_2044_S 956781957518
ycdY_S 957541958095
ycdZ_S 958199958681
KP1_2047_S 958813959358
KP1_2048_S 959425960018
mdoC_S 960053961213
yceF_S 986578987162
KP1_2077_S 987304987825
rpmF (50S ribosomal protein L32) 987842988015
plsX_S 988219989316
fabH_S 989370990323
fabD_S 990339991268
fabG_S 991281992015
fabF_S 992552993793
pabC_S 993919994728
yceG_S 994730995752
tmk_S 995742996383
holB_S 996380997384
ycfH_S 997395998189
ptsG2_S 998486999919
KP1_2092_S 10001811000537
ycfQ_S 10087711009406
ycfS_S 10100421011001
mfd_S 10111651014611
ycfU_S 10149071016115
ycfV_S 10161081016809
ycfW_S 10168091018053
1512167SPARK_1941_C1_2722467rplS (50S ribosomal protein L19) 1545715804 EMBL GBK
rpsP (30S ribosomal protein S16) 1721017458
grpE_S 2146322053
ppnK_S 2217823056
smpA_S 2495225293
KP1_4196_S 2536025650
KP1_4197_S 2564026116
smpB_S 2622726709
KP1_4812_S 104119104619
ygjR_S 104693105682
ygjT_S 105954106925
ygjU_S 107192108439
KP1_4816_S 108455109009
KP1_4822_S 115749116132
KP1_4823_S 116282116650
KP1_4824_S 116696117001
KP1_4825_S 117004117402
KP1_4826_S 117399117695
KP1_4861_S 133243133629
yraO_S 133619134245
yraP_S 134255134830
KP1_4865_S 134952135992
yhbO_S 136715137380
KP1_4868_S 137342137785
KP1_4870_S 138112138615
KP1_4871_S 138609139133
yhbU_S 139355140350
yhbV_S 140341141234
yhbW_S 141378142385
rpsO (30S ribosomal protein S15) 149299149568
infB 152209152526
rpmA (50S ribosomal protein L27) 170672170929
rplU (50S ribosomal protein L21) 170950171261
yrbI_S 180028180594
KP1_4921_S 180591181166
yhbN_S 181135181680
yhbG_S 181687182412
rpoN_S 182460183893
yhbH_S 183916184203
ptsN_S 184274184762
KP1_4927_S 184808185662
ptsO_S 185659185931
rpsI (30S ribosomal protein S9) 203714204106
rplM (50S ribosomal protein L13) 204122204550
mdh 209614210090
KP1_4977_S 229152229343
KP1_4978_S 229557230573
KP1_4979_S 230573231181
KP1_4980_S 231405231857
accB_S 231880232347
accC_S 232358233707
KP1_4984_S 233818234060
prmA_S 235513236394
KP1_4987_S 236364236594
yieP_S 250056250757
rbsK_S 253160254089
rbsB_S 254193255083
rbsC_S 255111256076
gidB_S 267766268389
atpI_S 268934269386
atpB_S 269394270209
atpE_S 270259270498
atpF_S 270555271019
rpmH (50S ribosomal protein L34) 299271299411
yicE_S 399076400476
gltS_S 401124401954
glpK_S 402069403580
glpF_S 403602404453
KP1_5367_S 404896405141
sbp_S 405293406282
rpmB (50S ribosomal protein L28) 437030437266
rpmG (50S ribosomal protein L33) 437287437454
KP1_5309_S 456176457132
KP1_5307_S 457136458407
yibO_S 458417460042
yibN_S 460207460638
grxC_S 460743460994
secB_S 461055461522
KP1_5262_S 502372503082
tkrA_S 503190504161
KP1_5260_S 504186505466
KP1_5259_S 505571506506
KP1_5258_S 506510507259
KP1_5213_S 561535562566
KP1_5210_S 564485565054
prlC_S 572843574885
KP1_5202_S 574836575645
yhiP_S 575773577245
uspA_S 577503577940
yhiO_S 578323578658
pitA_S 578714580210
asd_S 637764638918
glgB_S 639157641343
glgX_S 641436643316
glgC_S 643397644692
glgA_S 644692646125
aroK_S 687233687754
aroB_S 687810688904
dam_S 690354691181
rpe_S 691199691876
gph_S 691869692630
trpS_S 692623693627
cysG_S 693700695073
nirD_S 695227695553
yhfC_S 699651700838
ppiA_S 701115701684
KP1_5076_S 701791701958
KP1_5075_S 701948702550
pabA_S 702583703146
crp_S 706577707209
KP1_5070_S 707516707920
prkB_S 707975708844
KP1_5068_S 708881709099
yheT_S 709096710118
yheS_S 710322712226
rpsL (30S ribosomal protein S12) 719034719408
rpsG (30S ribosomal protein S7) 719505719975
1512165SPARK_1941_C1_3605731KP1_3551_S 78858316 EMBL GBK
rcsA_S 86929315
KP1_3553_S 93489539
KP1_3554_S 96709894
yedI_S 1198912900
wzi (Wzi outer membrane protein of cps cluster) 110358110804
mglA_S 200668202188
mglB_S 202307203305
galS_S 203602204624
folE_S 205953206621
yejE_S 231987233012
KP1_3844_S 234607234951
bcr_S 235283236479
rsuA_S 236476237195
KP1_3852_S 241877242512
KP1_3853_S 242556243317
yejK_S 243337244344
KP1_3855_S 244531244758
yejM_S 244777246537
nuoF_S 307996309333
nuoE_S 309330309830
nuoC_S 309833311641
nuoB_S 311728312402
nuoA_S 312418312864
yfcD_S 324856325407
yfcF_S 326079326717
yfcG_S 326898327527
folX_S 327593327955
accD_S 338960339943
dedA_S 340066340725
truA_S 340752341564
KP1_3958_S 341564342577
pdxB_S 342641343777
KP1_3960_S 343761343889
flk_S 343888344865
KP1_3965_S 349766350047
yfcM_S 350079350627
yfcA_S 350627351436
mepA_S 351436352260
aroC_S 352263353351
KP1_4022_S 452322453221
KP1_4023_S 453316453891
KP1_4024_S 453953454402
ypeA_S 454389454829
KP1_4027_S 454836454976
amiA_S 455026455898
hemF_S 455898456797
hscB_S 548391548906
iscA_S 548981549304
KP1_4113_S 549322549708
iscS_S 549735550949
iscR_S 551128551619
yfhQ_S 551854552588
suhB_S 552709553512
glyA_S 566197567450
hmpA_S 567776568966
KP1_4132_S 569041569379
yfhA_S 569445570782
yfhG_S 570769571476
yfhK_S 571485572924
nadB_S 591561593180
yfiC_S 593165593923
srmB_S 594034595365
yfiD_S 595411595794
ung_S 596107596796
1512174SPARK_1941_C1_4445823ygaH_S 104090104425 EMBL GBK
emrR_S 104546105046
emrA_S 105172106344
KP1_4281_S 108035109711
cbiQ_S 271761272438
KP1_4452_S 272425272706
KP1_4453_S 272708273445
KP1_4455_S 274152274946
KP1_4456_S 274957275742
KP1_4457_S 275739276464
pduW_S 301135302349
pduX_S 302405303307
cobD_S 303311304387
amiC_S 304405305694
argA_S 305886307217
ppdA_S 320861321328
thyA_S 321599322393
lgt_S 322400323275
ptsP_S 323521325767
ygdP_S 325780326310
galR_S 334139335155
KP1_4520_S 335116335595
KP1_4521_S 335592336365
KP1_4523_S 336433337860
KP1_4524_S 337868339268
mrkH 364782365486
mrkI 365492366076
mrkJ 366220366936
mrkF 366971367606
mrkD 367620368615
mrkB 371104371805
mrkA 371901372509
dsbC_S 412405413118
xerD_S 413141414037
fldB_S 414138414659
KP1_4612_S 414666415076
KP1_4613_S 415057415323
yqfA_S 416703417362
KP1_4617_S 417526417837
KP1_4618_S 417887418615
KP1_4629_S 429754430956
pepP_S 432142433458
KP1_4632_S 433482434066
KP1_4633_S 434227434556
yggE_S 438836439603
yggA_S 439693440328
yggB_S 440480441337
fbaA_S 441528442607
pgk_S 442705443868
epd_S 443908444936
1512177SPARK_1941_C1_5400755prfA_S 2968630768 EMBL GBK
hemK_S 3076831616
ychQ_S 3161632008
kdsA_S 3286433718
chaA_S 3380534905
chaB_S 3516935399
chaC_S 3553636216
tonB 8568586098
KP1_3291_S 8730087584
pfkB_S 8767988611
KP1_3289_S 8896889726
rpmI (50S ribosomal protein L35) 9323093427
rplT (50S ribosomal protein L20) 9347893834
ydhO_S 281972282844
KP1_3065_S 283185283532
gloA_S 284365284772
nemA_S 284851285948
ydhM_S 286002286601
anmK_S 294671295768
KP1_3049_S 295861296184
pdxH_S 296242296898
tyrS_S 297023298297
pdxY_S 298359299219
gst_S 299262299867
1512166SPARK_1941_C1_6364962yjjA_S 8363284123 EMBL GBK
dnaC_S 8418984926
dnaT_S 8492985468
yjjB_S 8557186059
yjjP_S 8603586811
KP1_0775_S 8709188275
KP1_0776_S 8829289173
fhuF_S 9299193779
ycdT_S 9388694932
mtr_S 9508395436
holD_S 9708097493
rimI_S 9746297908
yjjG_S 9792398600
prfC_S 98691100280
deoA_S 106147107469
deoB_S 107522108745
KP1_0801_S 108848109567
lplA_S 109648110664
smp_S 110664111311
serB_S 111395112387
sms_S 112397113779
nadR_S 113801115033
yjjK_S 115127116794
creB_S 122204122893
creC_S 122893124317
arcA_S 125799126515
lasT_S 127148127834
thrA_S 128154130658
thrB_S 130660131589
rpsT (30S ribosomal protein S20) 147028147291
yabF_S 162911163444
kefC_S 163437165302
folA_S 165476165955
apaH_S 166378167226
apaG_S 167231167608
ksgA_S 167611168432
pdxA_S 168429169418
araD_S 185312186007
araA_S 186145187647
araB_S 187658189367
araC_S 189705190550
yabI_S 190679191446
tbpA_S 193704194648
yabN_S 194977196632
KP1_0882_S 196714196872
setA_S 197140198324
gudP_S 198358199668
ilvI_S 212988214712
ilvH_S 214685215206
fruR_S 215387216391
KP1_0903_S 216996217490
mraW_S 217493218434
ftsL_S 218431218796
ftsI_S 218812220578
mutT_S 238549238941
yacG_S 238994239188
KP1_0925_S 239198239941
coaE_S 239941240561
KP1_0927_S 240717240848
guaC_S 240905241948
ppdD_S 244576245007
nadC_S 245189246082
ampD_S 246216246779
ampE_S 246776247630
KP1_0935_S 247866248816
KP1_0936_S 248816250222
lpdA_S 258117259544
KP1_0945_S 259709259993
KP1_0946_S 260039260854
hpt_S 275387275935
yadG_S 276842277768
yadH_S 277765278535
yadI_S 278658279098
KP1_0965_S 279163280410
folK_S 282697283176
yadB_S 284630285511
dksA_S 285571286044
sfsA_S 286189286905
map_S 330089330883
rpsB (30S ribosomal protein S2) 331206331931
tsf_S 332051332902
pyrH_S 333053333778
frr_S 333929334486
ispC_S 334715335917
1512185SPARK_1941_C1_7363391yjaB_S 313774 EMBL GBK
metA_S 9311860
aceA_S 37875106
aceK_S 52096993
iclR_S 70447970
pgi 2001920450
KP1_0299_S 4936749783
KP1_0300_S 4978750143
uvrA_S 5014452969
ssb_S 5322153745
KP1_0375_S 116102116422
cbpA_S 116407117324
KP1_0378_S 117470118168
KP1_0379_S 118331119164
hmsS_S 119210119659
efp_S 153591154157
ecnA_S 154231154362
ecnB_S 154522154668
sugE_S 154812155129
blc_S 155126155659
frdD_S 155773156162
hfq_S 177323177631
hflX_S 177707178987
hflK_S 179053180315
hflC_S 180318181322
KP1_0445_S 181405181746
KP1_0446_S 181918182115
KP1_0467_S 198878199153
rpsF (30S ribosomal protein S6) 199494199889
priB_S 200042200209
rpsR (30S ribosomal protein S18) 200214200441
rplI (50S ribosomal protein L9) 200483200932
KP1_0513_S 240421241065
KP1_0514_S 241171242304
KP1_0515_S 242288243406
KP1_0516_S 242315243418
KP1_0517_S 243403244143
KP1_0567_S 298829299653
KP1_0568_S 299664300551
KP1_0569_S 300541301425
yjgB_S 301556302575
silR 358610359290
1512181SPARK_1941_C1_8362562KP1_2703_S 218125218880 EMBL GBK
KP1_2702_S 219057219368
KP1_2700_S 219936220964
KP1_2697_S 222567223238
yneH_S 237525238451
yneI_S 238532239425
yneJ_S 240022240900
KP1_2673_S 240854241336
KP1_2672_S 241481242425
blaSHV (SHV beta-lactamase) 274230275087
1512163SPARK_1941_C1_9269053yeaE_S 119540120424 EMBL GBK
KP1_2220_S 120481121365
gapA 121743122192
yeaA_S 122774123187
KP1_2224_S 123231123509
KP1_2225_S 123604123948
spy_S 152980153462
nadE_S 154514155341
osmE_S 155624155962
celA_S 156241156561
celC_S 158121158468
1512184SPARK_1941_C1_10259809KP1_2532_S 202783203118 EMBL GBK
ydgB_S 203115203837
ydgI_S 203874205256
KP1_2535_S 205434206384
KP1_2536_S 206381206563
1512160SPARK_1941_C1_11158532dapA4_S 39054786 EMBL GBK
KP1_3538_S 48855553
tyrP_S 55786789
KP1_3536_S 69817220
ftnA_S 72567753
ruvA_S 3437134982
ruvB_S 3499136001
znuB_S 3606536850
znuC_S 3685037602
znuA_S 3755538625
KP1_3501_S 3864139960
msbB_S 4007841052
purT_S 4813349311
yebG_S 4945649803
KP1_3490_S 4994350602
ptrB_S 5072352783
exoX_S 5278753446
holE_S 5352553755
KP1_3486_S 5385954242
KP1_3451_S 8768188025
yeaZ_S 9021390908
yeaY_S 9094791528
fadD_S 9173493419
minE_S 9469494963
minD_S 9496795779
minC_S 9580396501
KP1_3442_S 9658996909
ycgM_S 9692697585
KP1_3440_S 9768098126
1512171SPARK_1941_C1_12112544rpsU (30S ribosomal protein S21) 1242012635 EMBL GBK
ureB_S 1917619496
ureA_S 1950619808
ureD_S 1981820642
KP1_4750_S 2104021657
folB_S 2176222148
uppP_S 2234723168
ribB_S 3206832721
ygiE_S 3278333553
ygiD_S 3374034531
ygiC_S 3457635736
KP1_4731_S 3574236413
yqgF_S 9889999315
KP1_4657_S 9931599878
gshB_S 100053101003
KP1_4654_S 101024101830
endA_S 101847102611
KP1_4652_S 102649103149
1512173SPARK_1941_C1_13111503silE 2944829996 EMBL GBK
silS 3013031605
silR 3159832278
silC 3231233853
silF 3388234235
silB 3434935641
silA 3565238798
silG 3888539325
silP 3945241899
pcoE 4319743646
pcoA 4387445697
pcoB 4569446593
pcoC 4663347013
pcoD 4701847947
pcoR 4799648682
pcoS 4867950079
arsC 5920460493
arsB 5920460493
arsA 6054162292
arsD 6231062672
arsR 6272263072
1512169 SPARK_1941_C1_14 110658
1512172SPARK_1941_C1_1599783KP1_0122_S 3971248 EMBL GBK
btuB_S 11933031
KP1_0120_S 30743196
trmA_S 33984498
KP1_0118_S 45504909
yijC_S 49255557
rpmE (50S ribosomal protein L31) 3018430396
cpxP_S 4090241405
cpxR_S 4155542253
cpxA_S 4225043623
KP1_0077_S 4369144365
sodA_S 4443845064
rhaT_S 4534846382
rhaR_S 4641547260
rhaS_S 4733448170
rhaB_S 4848149947
rhaA_S 4993851203
rhaD_S 5135352183
bipA_S 8181983642
glnA_S 8402185430
glnL_S 8561986668
glnG_S 8667788086
hemN_S 8834389716
KP1_0026_S 8990590411
engB_S 9099591627
polA_S 9197594767
1512161SPARK_1941_C1_1692876fadA_S 65417704 EMBL GBK
fre_S 78128513
ubiD_S 856310038
rfaH_S 1021710705
tatD_S 1070211493
tatC_S 1153812317
tatB_S 1232012856
tatA_S 1286013159
ubiB_S 1324114881
KP1_0193_S 1487815483
ubiE_S 1549716252
yigN_S 1632317771
udp_S 1790718668
metR_S 2872729680
yigM_S 2956830467
KP1_0183_S 3055631356
pldB_S 3140132393
rhtB_S 3250333123
yigB_S 4281043526
xerC_S 4352644428
KP1_0169_S 4442545132
dapF_S 4512945956
KP1_0167_S 4598946192
cyaY_S 4633946659
ilvY_S 8182782801
ilvA_S 8279884285
ilvD_S 8434586195
ilvE_S 8625687185
ilvM_S 8720287459
1512180SPARK_1941_C1_1734830rplK (50S ribosomal protein L11) 17772205 EMBL GBK
rplA (50S ribosomal protein L1) 22092913
rplJ (50S ribosomal protein L10) 33273824
rplL (50S ribosomal protein L7/L12) 38914256
rpoB 62376737
rsd_S 2296823465
nudC_S 2355924332
hemE_S 2437325437
nfi_S 2545026121
KP1_0239_S 2616426754
KP1_0241_S 2694127213
KP1_0242_S 2722027921
zraP_S 2792528362
1512187SPARK_1941_C1_1832085rpsJ (30S ribosomal protein S10) 75897900 EMBL GBK
rplC (50S ribosomal protein L3) 79338562
rplD (50S ribosomal protein L4) 85739178
rplW (50S ribosomal protein L23) 91759477
rplB (50S ribosomal protein L2) 949510316
rpsS (30S ribosomal protein S19) 1033310611
rplV (50S ribosomal protein L22) 1062610958
rpsC (30S ribosomal protein S3) 1097611674
rplP (50S ribosomal protein L16) 1168712097
rpmC (50S ribosomal protein L29) 1209712288
rpsQ (30S ribosomal protein S17) 1228812542
rplN (50S ribosomal protein L14) 1270813079
rplX (50S ribosomal protein L24) 1309013404
rplE (50S ribosomal protein L5) 1341913958
rpsN (30S ribosomal protein S14) 1397314278
rpsH (30S ribosomal protein S8) 1431214704
rplF (50S ribosomal protein L6) 1471715250
rplR (50S ribosomal protein L18) 1526015613
rpsE (30S ribosomal protein S5) 1562816131
rpmD (50S ribosomal protein L30) 1613516314
rplO (50S ribosomal protein L15) 1631816752
secY_S 1676018091
rpmJ (50S ribosomal protein L36) 1812518241
rpsM (30S ribosomal protein S13) 1838818744
rpsK (30S ribosomal protein S11) 1876119150
rpsD (30S ribosomal protein S4) 1918419804
KP1_5015_S 1983020819
rplQ (50S ribosomal protein L17) 2086021246
KP1_5012_S 2135521723
def_S 2667727186
smf_S 2731528439
KP1_5003_S 2841128884
yrdD_S 2891129453
yrdC_S 2941330030
aroE_S 3003430852
KP1_4999_S 3084931106
yrdA_S 3108231636
1512170 SPARK_1941_C1_19 31500
1512164 SPARK_1941_C1_20 27937
1512176 SPARK_1941_C1_21 24244
1512186 SPARK_1941_C1_22 4985
1512175 SPARK_1941_C1_23 4870
1512189 SPARK_1941_C1_24 1415
1512162 SPARK_1941_C1_25 1261
1512182 SPARK_1941_C1_26 1041
1512179 SPARK_1941_C1_27 725
1512168 SPARK_1941_C1_28 557
1512178 SPARK_1941_C1_29 515
1512188 SPARK_1941_C1_30 490