Sequence bin for SB6662

Contig summary statistics

Contigs
53
Total length
5,257,224
Minimum length
338
Maximum length
550,533
Mean length
99,193
N50
293,981
L50
7
N90
61,556
L90
21
N95
43,102
L95
26

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1418715contig_0001550533yedI_S 43235234 EMBL GBK
KP1_3554_S 73297553
KP1_3553_S 76857876
rcsA_S 79098532
KP1_3551_S 89089339
dapA4_S 1993720818
KP1_3538_S 2091721585
tyrP_S 2161022821
KP1_3536_S 2301323252
ftnA_S 2328823785
ruvA_S 5040351014
ruvB_S 5102352033
znuB_S 5209752882
znuC_S 5288253634
znuA_S 5358754657
KP1_3501_S 5467355992
msbB_S 5611057084
purT_S 6416465342
yebG_S 6548765834
KP1_3490_S 6597466633
ptrB_S 6675468814
exoX_S 6881869477
holE_S 6955669786
KP1_3486_S 6989070273
KP1_3451_S 103711104055
yeaZ_S 106243106938
yeaY_S 106977107558
fadD_S 107764109449
minE_S 110723110992
minD_S 110996111808
minC_S 111832112530
KP1_3442_S 112618112938
ycgM_S 112955113614
KP1_3440_S 113709114155
prfA_S 193603194685
hemK_S 194685195533
ychQ_S 195533195925
kdsA_S 196781197635
chaA_S 197722198822
chaB_S 199086199316
chaC_S 199453200133
tonB 249582249995
KP1_3291_S 251197251481
pfkB_S 251576252508
KP1_3289_S 252865253623
rpmI (50S ribosomal protein L35) 257128257325
rplT (50S ribosomal protein L20) 257376257732
ydhO_S 440472441344
KP1_3065_S 441685442032
gloA_S 442865443272
nemA_S 443351444448
ydhM_S 444502445101
anmK_S 453172454269
KP1_3049_S 454362454685
pdxH_S 454743455399
tyrS_S 455524456798
pdxY_S 456860457720
gst_S 457763458368
1418726contig_0003483326KP1_2536_S 2499425176 EMBL GBK
KP1_2535_S 2517326123
ydgI_S 2630127683
ydgB_S 2772028442
KP1_2532_S 2843928774
celC_S 324845325192
celA_S 326752327072
osmE_S 327351327689
nadE_S 327972328799
spy_S 329852330334
KP1_2225_S 359364359708
KP1_2224_S 359803360081
yeaA_S 360125360538
gapA 361120361569
KP1_2220_S 361947362831
yeaE_S 362888363772
1418689contig_0004454777rpsG (30S ribosomal protein S7) 25893059 EMBL GBK
rpsL (30S ribosomal protein S12) 31563530
yheS_S 1033812242
yheT_S 1244613468
KP1_5068_S 1346513683
prkB_S 1372014589
KP1_5070_S 1464415048
crp_S 1535515987
pabA_S 1941819981
KP1_5075_S 2001420616
ppiA_S 2088021449
yhfC_S 2172622913
nirD_S 2701127337
cysG_S 2749128864
trpS_S 2893729941
gph_S 2993430695
rpe_S 3068831365
dam_S 3138332210
aroB_S 3366034754
aroK_S 3481035331
glgA_S 7645077883
glgC_S 7788379178
glgX_S 7925981139
glgB_S 8123283418
asd_S 8365784811
pitA_S 142363143859
yhiO_S 143915144250
uspA_S 144633145070
yhiP_S 145327146799
prlC_S 147687149729
KP1_5210_S 157519158088
KP1_5213_S 160007161038
KP1_5258_S 214679215428
KP1_5259_S 215432216367
KP1_5260_S 216472217752
tkrA_S 217777218748
KP1_5262_S 218857219567
secB_S 261590262057
grxC_S 262118262369
yibN_S 262474262905
yibO_S 263071264696
KP1_5307_S 264706265977
KP1_5309_S 265981266928
rpmG (50S ribosomal protein L33) 285644285811
rpmB (50S ribosomal protein L28) 285832286068
sbp_S 316817317806
KP1_5367_S 317958318203
glpF_S 318646319497
glpK_S 319519321030
gltS_S 321145321975
yicE_S 322623324023
rpmH (50S ribosomal protein L34) 423929424069
atpF_S 452393452857
atpE_S 452914453153
atpB_S 453203454018
atpI_S 454026454478
1418696contig_0002352167KP1_2703_S 233453234208 EMBL GBK
KP1_2702_S 234385234696
KP1_2700_S 235264236292
KP1_2697_S 237895238566
yneH_S 252852253778
yneI_S 253859254752
yneJ_S 255349256227
KP1_2673_S 256181256663
KP1_2672_S 256808257752
blaSHV (SHV beta-lactamase) 290954291811
1418701contig_0008315160yjjA_S 2213322624 EMBL GBK
dnaC_S 2269023427
dnaT_S 2343023969
yjjB_S 2407224560
yjjP_S 2453625312
KP1_0775_S 2559226776
KP1_0776_S 2679327674
fhuF_S 3149232280
ycdT_S 3238733433
mtr_S 3358433937
holD_S 3534835761
rimI_S 3573036176
yjjG_S 3619136868
prfC_S 3695938548
deoA_S 4441545737
deoB_S 4579047013
KP1_0801_S 4711647835
lplA_S 4791648932
smp_S 4893249579
serB_S 4966350655
sms_S 5066552047
nadR_S 5206953301
yjjK_S 5339555062
creB_S 6047161160
creC_S 6116062584
arcA_S 6406664782
lasT_S 6541566101
thrA_S 6642168925
thrB_S 6892769856
rpsT (30S ribosomal protein S20) 8529585558
yabF_S 113391113924
kefC_S 113917115782
folA_S 115956116435
apaH_S 116688117536
apaG_S 117541117918
ksgA_S 117921118742
pdxA_S 118739119728
araD_S 135623136318
araA_S 136456137958
araB_S 137969139678
araC_S 140016140861
yabI_S 140990141757
tbpA_S 144015144959
yabN_S 145288146943
KP1_0882_S 147025147183
setA_S 147451148635
gudP_S 148669149979
ilvI_S 163300165024
ilvH_S 164997165518
fruR_S 165699166703
KP1_0903_S 167308167802
mraW_S 167805168746
ftsL_S 168743169108
ftsI_S 169124170890
mutT_S 188861189253
yacG_S 189306189500
KP1_0925_S 189510190253
coaE_S 190253190873
KP1_0927_S 191029191160
guaC_S 191217192260
ppdD_S 194888195319
nadC_S 195501196394
ampD_S 196528197091
ampE_S 197088197942
KP1_0935_S 198178199128
KP1_0936_S 199128200534
lpdA_S 208429209856
KP1_0945_S 210021210305
KP1_0946_S 210351211166
hpt_S 225612226160
yadG_S 227067227993
yadH_S 227990228760
yadI_S 228883229323
KP1_0965_S 229388230635
folK_S 232922233401
yadB_S 234855235736
dksA_S 235796236269
sfsA_S 236414237130
map_S 280335281129
rpsB (30S ribosomal protein S2) 281452282177
tsf_S 282297283148
pyrH_S 283299284024
frr_S 284175284732
ispC_S 284961286163
1418733contig_0009313872KP1_4652_S 2440724907 EMBL GBK
endA_S 2494525709
KP1_4654_S 2572626532
gshB_S 2655327503
KP1_4657_S 2767828241
yqgF_S 2824128657
KP1_4731_S 9082091491
ygiC_S 9149792657
ygiD_S 9270293493
ygiE_S 9368094450
ribB_S 9451295165
uppP_S 104065104886
folB_S 105085105471
KP1_4750_S 105576106193
ureD_S 106591107415
ureA_S 107425107727
ureB_S 107737108057
rpsU (30S ribosomal protein S21) 114598114813
KP1_4812_S 160658161158
ygjR_S 161232162221
ygjT_S 162493163464
ygjU_S 163731164978
KP1_4816_S 164994165548
KP1_4822_S 172289172672
KP1_4823_S 172822173190
KP1_4824_S 173236173541
KP1_4825_S 173544173942
KP1_4826_S 173939174235
KP1_4861_S 202546202932
yraO_S 202922203548
yraP_S 203558204133
KP1_4865_S 204255205295
yhbO_S 206018206683
KP1_4868_S 206645207088
KP1_4870_S 207415207918
KP1_4871_S 207912208436
yhbU_S 208658209653
yhbV_S 209644210537
yhbW_S 210681211688
rpsO (30S ribosomal protein S15) 218602218871
infB 221512221829
rpmA (50S ribosomal protein L27) 239976240233
rplU (50S ribosomal protein L21) 240254240565
yrbI_S 249334249900
KP1_4921_S 249897250472
yhbN_S 250441250986
yhbG_S 250993251718
rpoN_S 251766253199
yhbH_S 253222253509
ptsN_S 253580254068
KP1_4927_S 254114254968
ptsO_S 254965255237
rpsI (30S ribosomal protein S9) 273020273412
rplM (50S ribosomal protein L13) 273428273856
mdh 278920279396
KP1_4977_S 298457298648
KP1_4978_S 298862299878
KP1_4979_S 299878300486
KP1_4980_S 300710301162
accB_S 301185301652
accC_S 301663303012
KP1_4984_S 303123303365
prmA_S 304818305699
KP1_4987_S 305669305899
1418711contig_0007293981cbiQ_S 154842155519 EMBL GBK
KP1_4452_S 155506155787
KP1_4453_S 155789156526
KP1_4455_S 157233158027
KP1_4456_S 158038158823
KP1_4457_S 158820159545
pduW_S 184216185430
pduX_S 185486186388
cobD_S 186392187468
amiC_S 187486188775
argA_S 188967190298
ppdA_S 203942204409
thyA_S 204680205474
lgt_S 205481206356
ptsP_S 206602208848
ygdP_S 208861209391
galR_S 217218218234
KP1_4520_S 218195218674
KP1_4521_S 218671219444
KP1_4523_S 219512220939
KP1_4524_S 220947222347
mrkH 247861248565
mrkI 248571249155
mrkJ 249299250015
mrkF 250050250685
mrkD 250699251694
mrkC 251685254171
mrkB 254183254884
mrkA 254980255588
1418692contig_0010286182ycfW_S 1016511409 EMBL GBK
ycfV_S 1140912110
ycfU_S 1210313311
mfd_S 1360717053
ycfS_S 1721718176
ycfQ_S 1881219447
KP1_2092_S 2768128037
ptsG2_S 2829929732
ycfH_S 3002930823
holB_S 3083431838
tmk_S 3183532476
yceG_S 3246633488
pabC_S 3349034299
fabF_S 3442535666
fabG_S 3620336937
fabD_S 3695037879
fabH_S 3789538848
plsX_S 3890239999
rpmF (50S ribosomal protein L32) 4020340376
KP1_2077_S 4039340914
yceF_S 4105641640
mdoC_S 6700468164
KP1_2048_S 6819968792
KP1_2047_S 6885969404
ycdZ_S 6953670018
ycdY_S 7012270676
KP1_2044_S 7069971436
pyrD_S 147813148850
ssuE_S 149073149648
ssuA_S 149641150603
ssuD_S 150600151745
ssuC_S 151756152547
KP1_1916_S 181903183132
msbA_S 184164185912
ihfB_S 188419188706
rpsA (30S ribosomal protein S1) 188858190531
ybjE_S 231206232105
hcp_S 232249233901
hcr_S 233912234880
KP1_1855_S 249950250666
KP1_1853_S 251914252402
potI_S 252460253347
potH_S 253302254255
1418712contig_0011264731fsr_S 6782169041 EMBL GBK
ybaL_S 6926770943
gsk_S 7097972283
hemH_S 7234773309
adk_S 7343874082
rpmJ (50S ribosomal protein L36) 9543895578
rpmE2_S 9557895841
rpmE (50S ribosomal protein L31) 9557895841
lacI_S 9595797027
ptsG_S 9870699020
KP1_1275_S 127531127899
ppiD_S 128048129922
hupB_S 130137130409
lon_S 130619133081
clpX_S 133157134431
clpP_S 134682135305
tig_S 135615136913
KP1_1251_S 151367152185
KP1_1248_S 153892155070
yajR_S 155230156594
KP1_1246_S 156638157222
apbA_S 157321158232
thiJ_S 158189158788
nrdR_S 168759169208
yajI_S 169356169895
tsx_S 170194171078
KP1_1228_S 171133171828
KP1_1227_S 171852172217
KP1_1211_S 182979183845
KP1_1209_S 185797186342
KP1_1207_S 186529187170
KP1_1206_S 187437188339
phoE 254867255286
1418734contig_0012262921tolR_S 44494877 EMBL GBK
tolQ_S 48815573
KP1_1697_S 55705974
KP1_1696_S 61246414
cydB_S 65467685
cydA_S 77019272
KP1_1663_S 4204742739
ybfF_S 4277943552
KP1_1661_S 4361743979
fldA_S 4406244661
fur_S 4495345405
KP1_1657_S 4602146353
KP1_1656_S 4640146901
metH_S 4787848186
glnS_S 4824049907
nagE_S 5008652041
nagB_S 5235653156
nagA_S 5326654414
nagC_S 5442355643
nagD_S 5576056512
rlpB_S 7752778117
holA_S 7812679148
nadD_S 7913879791
KP1_1624_S 8071681033
KP1_1623_S 8103781504
ybeF_S 8824889252
lipA_S 8943390398
tatE_S 9058990795
ybeM_S 9103891826
KP1_1612_S 9191692299
cspE_S 9236792660
pagP_S 9277193289
dcuC_S 9362895001
KP1_1607_S 9509495891
ykfE_S 173135173662
betT_S 173708175741
betB_S 176471177943
betA_S 177912179621
1418729contig_0015175253KP1_4022_S 1940620305 EMBL GBK
KP1_4023_S 2040020975
KP1_4024_S 2103721486
ypeA_S 2147321913
KP1_4027_S 2192022060
amiA_S 2211022982
hemF_S 2298223881
hscB_S 117996118511
iscA_S 118586118909
KP1_4113_S 118927119313
iscS_S 119340120554
iscR_S 120733121224
yfhQ_S 121459122193
suhB_S 122314123117
glyA_S 135802137055
hmpA_S 137381138571
KP1_4132_S 138646138984
yfhA_S 139050140387
yfhG_S 140374141081
yfhK_S 141090142529
nadB_S 161167162786
yfiC_S 162771163529
srmB_S 163640164971
yfiD_S 165017165400
ung_S 165713166402
1418698contig_0016165177nuoA_S 19642410 EMBL GBK
nuoB_S 24263100
nuoC_S 31874995
nuoE_S 49985498
nuoF_S 54956832
yejM_S 6828370043
KP1_3855_S 7006270289
yejK_S 7047671483
KP1_3853_S 7150372264
KP1_3852_S 7230872943
rsuA_S 7762578344
bcr_S 7834179537
KP1_3844_S 7986980213
yejE_S 8180882833
folE_S 109736110404
galS_S 111733112755
mglB_S 113052114050
mglA_S 114169115689
1418685contig_0017147903ybhA_S 1590716725 EMBL GBK
ybhE_S 1695317948
KP1_1726_S 1805918325
KP1_1727_S 1837718682
KP1_1728_S 1881019055
KP1_1729_S 1938520596
KP1_1730_S 2075221486
KP1_1731_S 2152822082
KP1_1732_S 2216422529
KP1_1734_S 2363524558
glnH_S 8698587731
dps_S 8814088643
ybiF_S 8888189768
ompX_S 9012090632
ybiP_S 9072392312
KP1_1803_S 9257292697
mntR_S 9288393356
ybiR_S 9335394465
1418687contig_0014132170hfq_S 78798187 EMBL GBK
hflX_S 82639543
hflK_S 960910871
hflC_S 1087411878
KP1_0445_S 1196112302
KP1_0446_S 1247412671
KP1_0467_S 2943329708
rpsF (30S ribosomal protein S6) 3004930444
priB_S 3059730764
rpsR (30S ribosomal protein S18) 3076930996
rplI (50S ribosomal protein L9) 3103831487
KP1_0513_S 7334373987
KP1_0514_S 7409375226
KP1_0515_S 7521076328
KP1_0516_S 7523776340
KP1_0517_S 7632577065
KP1_0567_S 125966126790
KP1_0568_S 126801127688
KP1_0569_S 127678128562
yjgB_S 128693129712
1418688contig_001894218KP1_0122_S 3251176 EMBL GBK
btuB_S 11212977
KP1_0120_S 30203142
trmA_S 33444444
KP1_0118_S 44964855
yijC_S 48715503
rpmE (50S ribosomal protein L31) 3013430346
cpxP_S 4086941372
cpxR_S 4152242220
cpxA_S 4221743590
KP1_0077_S 4365744331
sodA_S 4440445030
rhaT_S 4531346347
rhaR_S 4638047225
rhaS_S 4729948135
rhaB_S 4844649912
rhaA_S 4990351168
rhaD_S 5131852148
bipA_S 7656678389
glnA_S 7876880177
glnL_S 8036681415
glnG_S 8142482833
hemN_S 8309084463
KP1_0026_S 8465285158
engB_S 8574286374
polA_S 8672289514
1418695contig_001987543yjaB_S 170631 EMBL GBK
metA_S 7881717
aceA_S 36444963
aceK_S 50666850
iclR_S 69017827
pgi 2585426285
KP1_0299_S 5520455620
KP1_0300_S 5562455980
uvrA_S 5598158806
ssb_S 5905859582
1418720contig_002086675ilvM_S 53745631 EMBL GBK
ilvE_S 56486577
ilvD_S 66388488
ilvA_S 854810035
ilvY_S 1003211006
cyaY_S 4625946579
KP1_0167_S 4672646929
dapF_S 4696247789
KP1_0169_S 4778648493
xerC_S 4849049392
yigB_S 4939250108
rhtB_S 5980860428
pldB_S 6053861530
KP1_0183_S 6157562375
yigM_S 6246463363
metR_S 6325164204
udp_S 6786068621
yigN_S 6875770205
ubiE_S 7027671031
KP1_0193_S 7104571650
ubiB_S 7164773287
tatA_S 7336973668
tatB_S 7367274208
tatC_S 7421174990
tatD_S 7503575826
rfaH_S 7582376311
ubiD_S 7649077965
fre_S 7801578716
fadA_S 7882379986
1418693contig_000683156ygaH_S 7257872913 EMBL GBK
emrR_S 7303473534
emrA_S 7366074832
KP1_4281_S 7652378199
1418706contig_002172166silR 39064586 EMBL GBK
silA 782510971
1418722contig_002369032aroC_S 3052831616 EMBL GBK
mepA_S 3161932443
yfcA_S 3244333252
yfcM_S 3325233800
KP1_3965_S 3383234113
flk_S 3901439991
KP1_3960_S 3999040118
pdxB_S 4010241238
KP1_3958_S 4130242315
truA_S 4231543127
dedA_S 4315443813
accD_S 4393644919
folX_S 5592456286
yfcG_S 5635256981
yfcF_S 5716257800
yfcD_S 5847259023
1418684 contig_0024 61556
1418708 contig_0027 56257
1418709contig_002855319crl_S 2502625424 EMBL GBK
frsA_S 2548226726
gpt_S 2683227290
pepD_S 2754829005
yafP_S 2904829500
yafE_S 5027351043
KP1_1068_S 5113551941
yafC_S 5333054235
dkgB_S 5428155084
1418731contig_002951168ybtT 2534526148 EMBL GBK
ybtU 2614527245
ybtA 4311944078
ybtP 4433546047
ybtQ 4603447836
ybtX 4782949109
ybtS 4913750441
1418703contig_003046009wzi (Wzi outer membrane protein of cps cluster) 46705116 EMBL GBK
1418702contig_001343102efp_S 2732827894 EMBL GBK
ecnA_S 2796828099
ecnB_S 2825928405
sugE_S 2854928866
blc_S 2886329396
frdD_S 2951029899
1418730contig_003142867epd_S 4991527 EMBL GBK
pgk_S 15672730
fbaA_S 28283907
yggB_S 40984955
yggA_S 51075742
yggE_S 58326599
KP1_4633_S 1087911208
KP1_4632_S 1136911953
pepP_S 1197713293
KP1_4629_S 1447915681
KP1_4618_S 2682027548
KP1_4617_S 2759827909
yqfA_S 2807328732
KP1_4613_S 3011230378
KP1_4612_S 3035930769
fldB_S 3077631297
xerD_S 3139832294
dsbC_S 3231733030
1418713 contig_0025 42167
1418707contig_003234547zraP_S 62876724 EMBL GBK
KP1_0242_S 67287429
KP1_0241_S 74367708
KP1_0239_S 78958485
nfi_S 85289199
hemE_S 921210276
nudC_S 1031711090
rsd_S 1118411681
rpoB 2791228412
rplL (50S ribosomal protein L7/L12) 3039330758
rplJ (50S ribosomal protein L10) 3082531322
rplA (50S ribosomal protein L1) 3167032374
rplK (50S ribosomal protein L11) 3237832806
1418732contig_003329729rplS (50S ribosomal protein L19) 1537815725 EMBL GBK
rpsP (30S ribosomal protein S16) 1713117379
grpE_S 2138421974
ppnK_S 2209922977
smpA_S 2487325214
KP1_4196_S 2528025570
KP1_4197_S 2556026036
smpB_S 2614726629
1418716contig_003426247rpsJ (30S ribosomal protein S10) 18982209 EMBL GBK
rplC (50S ribosomal protein L3) 22422871
rplD (50S ribosomal protein L4) 28823487
rplW (50S ribosomal protein L23) 34843786
rplB (50S ribosomal protein L2) 38044625
rpsS (30S ribosomal protein S19) 46424920
rplV (50S ribosomal protein L22) 49355267
rpsC (30S ribosomal protein S3) 52855983
rplP (50S ribosomal protein L16) 59966406
rpmC (50S ribosomal protein L29) 64066597
rpsQ (30S ribosomal protein S17) 65976851
rplN (50S ribosomal protein L14) 70177388
rplX (50S ribosomal protein L24) 73997713
rplE (50S ribosomal protein L5) 77288267
rpsN (30S ribosomal protein S14) 82828587
rpsH (30S ribosomal protein S8) 86219013
rplF (50S ribosomal protein L6) 90269559
rplR (50S ribosomal protein L18) 95699922
rpsE (30S ribosomal protein S5) 993710440
rpmD (50S ribosomal protein L30) 1044410623
rplO (50S ribosomal protein L15) 1062711061
secY_S 1106912400
rpmJ (50S ribosomal protein L36) 1243412550
rpsM (30S ribosomal protein S13) 1269713053
rpsK (30S ribosomal protein S11) 1307013459
rpsD (30S ribosomal protein S4) 1349314113
KP1_5015_S 1413915128
rplQ (50S ribosomal protein L17) 1516915555
KP1_5012_S 1566416032
def_S 2098621495
smf_S 2162422748
KP1_5003_S 2272023193
yrdD_S 2322023762
yrdC_S 2372224339
aroE_S 2434325161
KP1_4999_S 2515825415
yrdA_S 2539125945
1418723contig_003518799yieP_S 211912 EMBL GBK
rbsK_S 33154244
rbsB_S 43485238
rbsC_S 52666231
gidB_S 1792118544
1418724contig_002616554KP1_0375_S 128448 EMBL GBK
cbpA_S 4331350
KP1_0378_S 14962194
KP1_0379_S 23573190
hmsS_S 32363685
1418697 contig_0036 7537
1418683 contig_0037 5663
1418735 contig_0038 5315
1418719 contig_0005 4213
1418727 contig_0041 4051
1418705 contig_0039 2986
1418686 contig_0022 2971
1418710 contig_0040 1734
1418728 contig_0042 1601
1418704 contig_0043 1254
1418694 contig_0044 713
1418714 contig_0045 595
1418691 contig_0046 525
1418718 contig_0047 524
1418725 contig_0048 475
1418699 contig_0049 386
1418717 contig_0050 363
1418721 contig_0051 361
1418700 contig_0052 355
1418690 contig_0053 338