Sequence bin for SB6655

Contig summary statistics

Contigs
48
Total length
5,307,090
Minimum length
241
Maximum length
630,205
Mean length
110,565
N50
271,378
L50
7
N90
72,168
L90
21
N95
43,866
L95
25

FASTAEMBLGBKGFF3

SequenceSequencing methodOriginal designationLengthCommentsLocusStartEndDirectionAnnotation
1418301contig_0001630205yedI_S 1202812939 EMBL GBK
KP1_3554_S 1503415258
KP1_3553_S 1539015581
rcsA_S 1561416237
KP1_3551_S 1661317044
dapA4_S 2764228523
KP1_3538_S 2862229290
tyrP_S 2931530526
KP1_3536_S 3071830957
ftnA_S 3099331490
ruvA_S 5810858719
ruvB_S 5872859738
znuB_S 5980260587
znuC_S 6058761339
znuA_S 6129262362
KP1_3501_S 6237863697
msbB_S 6381564789
purT_S 7186973047
yebG_S 7319273539
KP1_3490_S 7367974338
ptrB_S 7445976519
exoX_S 7652377182
holE_S 7726177491
KP1_3486_S 7759577978
KP1_3451_S 111416111760
yeaZ_S 113948114643
yeaY_S 114682115263
fadD_S 115469117154
minE_S 118428118697
minD_S 118701119513
minC_S 119537120235
KP1_3442_S 120323120643
ycgM_S 120660121319
KP1_3440_S 121414121860
prfA_S 201308202390
hemK_S 202390203238
ychQ_S 203238203630
kdsA_S 204486205340
chaA_S 205427206527
chaB_S 206791207021
chaC_S 207158207838
tonB 257287257700
KP1_3291_S 258902259186
pfkB_S 259281260213
KP1_3289_S 260570261328
rpmI (50S ribosomal protein L35) 264833265030
rplT (50S ribosomal protein L20) 265081265437
ydhO_S 448177449049
KP1_3065_S 449390449737
gloA_S 450570450977
nemA_S 451056452153
ydhM_S 452207452806
anmK_S 460877461974
KP1_3049_S 462067462390
pdxH_S 462448463104
tyrS_S 463229464503
pdxY_S 464565465425
gst_S 465468466073
1418284contig_0002477639KP1_2536_S 1930719489 EMBL GBK
KP1_2535_S 1948620436
ydgI_S 2061421996
ydgB_S 2203322755
KP1_2532_S 2275223087
celC_S 319158319505
celA_S 321065321385
osmE_S 321664322002
nadE_S 322285323112
spy_S 324165324647
KP1_2225_S 353677354021
KP1_2224_S 354116354394
yeaA_S 354438354851
gapA 355433355882
KP1_2220_S 356260357144
yeaE_S 357201358085
1418310contig_0003474102yieP_S 4081109 EMBL GBK
rbsK_S 35124441
rbsB_S 45455435
rbsC_S 54636428
gidB_S 1811818741
atpI_S 1928619738
atpB_S 1974620561
atpE_S 2061120850
atpF_S 2090721371
rpmH (50S ribosomal protein L34) 4969549835
yicE_S 149741151141
gltS_S 151789152619
glpK_S 152734154245
glpF_S 154267155118
KP1_5367_S 155561155806
sbp_S 155958156947
rpmB (50S ribosomal protein L28) 187696187932
rpmG (50S ribosomal protein L33) 187953188120
KP1_5309_S 206836207783
KP1_5307_S 207787209058
yibO_S 209068210693
yibN_S 210859211290
grxC_S 211395211646
secB_S 211707212174
KP1_5262_S 254197254907
tkrA_S 255016255987
KP1_5260_S 256012257292
KP1_5259_S 257397258332
KP1_5258_S 258336259085
KP1_5213_S 313176314207
KP1_5210_S 316126316695
prlC_S 324485326527
yhiP_S 327415328887
uspA_S 329144329581
yhiO_S 329964330299
pitA_S 330355331851
asd_S 389403390557
glgB_S 390796392982
glgX_S 393075394955
glgC_S 395036396331
glgA_S 396331397764
aroK_S 438883439404
aroB_S 439460440554
dam_S 442004442831
rpe_S 442849443526
gph_S 443519444280
trpS_S 444273445277
cysG_S 445350446723
nirD_S 446877447203
yhfC_S 451301452488
ppiA_S 452765453334
KP1_5075_S 453598454200
pabA_S 454233454796
crp_S 458227458859
KP1_5070_S 459166459570
prkB_S 459625460494
KP1_5068_S 460531460749
yheT_S 460746461768
yheS_S 461972463876
rpsL (30S ribosomal protein S12) 470684471058
rpsG (30S ribosomal protein S7) 471155471625
1418297contig_0007376894yjjA_S 8386784358 EMBL GBK
dnaC_S 8442485161
dnaT_S 8516485703
yjjB_S 8580686294
yjjP_S 8627087046
KP1_0775_S 8732688510
KP1_0776_S 8852789408
fhuF_S 9322694014
ycdT_S 9412195167
mtr_S 9531895671
holD_S 9708297495
rimI_S 9746497910
yjjG_S 9792598602
prfC_S 98693100282
deoA_S 106149107471
deoB_S 107524108747
KP1_0801_S 108850109569
lplA_S 109650110666
smp_S 110666111313
serB_S 111397112389
sms_S 112399113781
nadR_S 113803115035
yjjK_S 115129116796
creB_S 122205122894
creC_S 122894124318
arcA_S 125800126516
lasT_S 127149127835
thrA_S 128155130659
thrB_S 130661131590
rpsT (30S ribosomal protein S20) 147029147292
yabF_S 175125175658
kefC_S 175651177516
folA_S 177690178169
apaH_S 178422179270
apaG_S 179275179652
ksgA_S 179655180476
pdxA_S 180473181462
araD_S 197357198052
araA_S 198190199692
araB_S 199703201412
araC_S 201750202595
yabI_S 202724203491
tbpA_S 205749206693
yabN_S 207022208677
KP1_0882_S 208759208917
setA_S 209185210369
gudP_S 210403211713
ilvI_S 225034226758
ilvH_S 226731227252
fruR_S 227433228437
KP1_0903_S 229042229536
mraW_S 229539230480
ftsL_S 230477230842
ftsI_S 230858232624
mutT_S 250595250987
yacG_S 251040251234
KP1_0925_S 251244251987
coaE_S 251987252607
KP1_0927_S 252763252894
guaC_S 252951253994
ppdD_S 256622257053
nadC_S 257235258128
ampD_S 258262258825
ampE_S 258822259676
KP1_0935_S 259912260862
KP1_0936_S 260862262268
lpdA_S 270163271590
KP1_0945_S 271755272039
KP1_0946_S 272085272900
hpt_S 287346287894
yadG_S 288801289727
yadH_S 289724290494
yadI_S 290617291057
KP1_0965_S 291122292369
folK_S 294656295135
yadB_S 296589297470
dksA_S 297530298003
sfsA_S 298148298864
map_S 342069342863
rpsB (30S ribosomal protein S2) 343186343911
tsf_S 344031344882
pyrH_S 345033345758
frr_S 345909346466
ispC_S 346695347897
1418281contig_0006297567cbiQ_S 154841155518 EMBL GBK
KP1_4452_S 155505155786
KP1_4453_S 155788156525
KP1_4455_S 157232158026
KP1_4456_S 158037158822
KP1_4457_S 158819159544
pduW_S 184215185429
pduX_S 185485186387
cobD_S 186391187467
amiC_S 187485188774
argA_S 188966190297
ppdA_S 203941204408
thyA_S 204679205473
lgt_S 205480206355
ptsP_S 206601208847
ygdP_S 208860209390
galR_S 217217218233
KP1_4520_S 218194218673
KP1_4521_S 218670219443
KP1_4523_S 219511220938
KP1_4524_S 220946222346
mrkH 247860248564
mrkI 248570249154
mrkJ 249298250014
mrkF 250049250684
mrkD 250698251693
mrkC 251684254170
mrkB 254182254883
mrkA 254979255587
1418280contig_0010285837blaSHV (SHV beta-lactamase) 6610466961 EMBL GBK
KP1_2672_S 100163101107
KP1_2673_S 101252101734
yneJ_S 101688102566
yneI_S 103163104056
yneH_S 104137105063
KP1_2697_S 119349120020
KP1_2700_S 121623122651
KP1_2702_S 123219123530
KP1_2703_S 123707124462
1418287contig_0008271378ycfW_S 1016511409 EMBL GBK
ycfV_S 1140912110
ycfU_S 1210313311
mfd_S 1360717053
ycfS_S 1721718176
ycfQ_S 1881219447
KP1_2092_S 2768128037
ptsG2_S 2829929732
ycfH_S 3002930823
holB_S 3083431838
tmk_S 3183532476
yceG_S 3246633488
pabC_S 3349034299
fabF_S 3442535666
fabG_S 3620336937
fabD_S 3695037879
fabH_S 3789538848
plsX_S 3890239999
rpmF (50S ribosomal protein L32) 4020340376
KP1_2077_S 4039340914
yceF_S 4105641640
mdoC_S 6700468164
KP1_2048_S 6819968792
KP1_2047_S 6885969404
ycdZ_S 6953670018
ycdY_S 7012270676
KP1_2044_S 7069971436
pyrD_S 147813148850
ssuE_S 149073149648
ssuA_S 149641150603
ssuD_S 150600151745
ssuC_S 151756152547
KP1_1916_S 181903183132
msbA_S 184164185912
ihfB_S 188419188706
rpsA (30S ribosomal protein S1) 188858190531
ybjE_S 231206232105
hcp_S 232249233901
hcr_S 233912234880
KP1_1855_S 249950250666
KP1_1853_S 251914252402
potI_S 252460253347
potH_S 253302254255
1418298contig_0011254602tolR_S 44494877 EMBL GBK
tolQ_S 48815573
KP1_1697_S 55705974
KP1_1696_S 61246414
cydB_S 65467685
cydA_S 77019272
KP1_1663_S 4204742739
ybfF_S 4277943552
KP1_1661_S 4361743979
fldA_S 4406244661
fur_S 4495345405
KP1_1657_S 4602146353
KP1_1656_S 4640146901
metH_S 4787848186
glnS_S 4824049907
nagE_S 5008652041
nagB_S 5235653156
nagA_S 5326654414
nagC_S 5442355643
nagD_S 5576056512
rlpB_S 7752778117
holA_S 7812679148
nadD_S 7913879791
KP1_1624_S 8071681033
KP1_1623_S 8103781504
ybeF_S 8824889252
lipA_S 8943390398
tatE_S 9058990795
ybeM_S 9103891826
KP1_1612_S 9191692299
cspE_S 9236792660
pagP_S 9277193289
dcuC_S 9362895001
KP1_1607_S 9509495891
ykfE_S 173135173662
betT_S 173708175741
betB_S 176471177943
betA_S 177912179621
1418318contig_0012251673fsr_S 6781969039 EMBL GBK
ybaL_S 6926570941
gsk_S 7097772281
hemH_S 7234573307
adk_S 7343674080
rpmJ (50S ribosomal protein L36) 9543695576
rpmE2_S 9557695839
rpmE (50S ribosomal protein L31) 9557695839
lacI_S 9595597025
ptsG_S 9870499018
KP1_1275_S 127529127897
ppiD_S 128046129920
hupB_S 130135130407
lon_S 130617133079
clpX_S 133155134429
clpP_S 134680135303
tig_S 135613136911
KP1_1251_S 151365152183
KP1_1248_S 153890155068
yajR_S 155228156592
KP1_1246_S 156636157220
apbA_S 157319158230
thiJ_S 158187158786
nrdR_S 168757169206
yajI_S 169354169893
tsx_S 170192171076
KP1_1228_S 171131171826
KP1_1227_S 171850172215
KP1_1211_S 182977183843
KP1_1209_S 185795186340
KP1_1207_S 186527187168
KP1_1206_S 187435188337
1418313contig_0015179080KP1_4652_S 2440724907 EMBL GBK
endA_S 2494525709
KP1_4654_S 2572626532
gshB_S 2655327503
KP1_4657_S 2767828241
yqgF_S 2824128657
KP1_4731_S 9082091491
ygiC_S 9149792657
ygiD_S 9270293493
ygiE_S 9368094450
ribB_S 9451295165
uppP_S 104065104886
folB_S 105085105471
KP1_4750_S 105576106193
ureD_S 106591107415
ureA_S 107425107727
ureB_S 107737108057
rpsU (30S ribosomal protein S21) 114598114813
KP1_4812_S 160658161158
ygjR_S 161232162221
ygjT_S 162493163464
ygjU_S 163731164978
KP1_4816_S 164994165548
KP1_4822_S 172289172672
KP1_4823_S 172822173190
KP1_4824_S 173236173541
KP1_4825_S 173544173942
KP1_4826_S 173939174235
1418286contig_0016175253ung_S 88529541 EMBL GBK
yfiD_S 985410237
srmB_S 1028311614
yfiC_S 1172512483
nadB_S 1246814087
yfhK_S 3272534164
yfhG_S 3417334880
yfhA_S 3486736204
KP1_4132_S 3627036608
hmpA_S 3668337873
glyA_S 3819939452
suhB_S 5213752940
yfhQ_S 5306153795
iscR_S 5403054521
iscS_S 5470055914
KP1_4113_S 5594156327
iscA_S 5634556668
hscB_S 5674357258
hemF_S 151373152272
amiA_S 152272153144
KP1_4027_S 153194153334
ypeA_S 153341153781
KP1_4024_S 153768154217
KP1_4023_S 154279154854
KP1_4022_S 154949155848
1418274contig_0017172829yejM_S 2756529325 EMBL GBK
KP1_3855_S 2934429571
yejK_S 2975830765
KP1_3853_S 3078531546
KP1_3852_S 3159032225
rsuA_S 3690737626
bcr_S 3762338819
KP1_3844_S 3915139495
yejE_S 4109042115
folE_S 6901869686
galS_S 7101572037
mglB_S 7233473332
mglA_S 7345174971
wzi (Wzi outer membrane protein of cps cluster) 165363165809
1418277contig_0018148759ybhA_S 1590716725 EMBL GBK
ybhE_S 1695317948
KP1_1726_S 1805918325
KP1_1727_S 1837718682
KP1_1728_S 1881019055
KP1_1729_S 1938520596
KP1_1730_S 2075221486
KP1_1731_S 2152822082
KP1_1732_S 2216422529
KP1_1734_S 2363524558
glnH_S 8698587731
dps_S 8814088643
ybiF_S 8888189768
ompX_S 9012090632
ybiP_S 9072392312
KP1_1803_S 9257292697
mntR_S 9288393356
ybiR_S 9335394465
1418292contig_0021138781KP1_4861_S 2347623862 EMBL GBK
yraO_S 2385224478
yraP_S 2448825063
KP1_4865_S 2518526225
yhbO_S 2694827613
KP1_4868_S 2757528018
KP1_4870_S 2834528848
KP1_4871_S 2884229366
yhbU_S 2958830583
yhbV_S 3057431467
yhbW_S 3161132618
rpsO (30S ribosomal protein S15) 3953239801
infB 4244242759
rpmA (50S ribosomal protein L27) 6090661163
rplU (50S ribosomal protein L21) 6118461495
yrbI_S 7026470830
KP1_4921_S 7082771402
yhbN_S 7137171916
yhbG_S 7192372648
rpoN_S 7269674129
yhbH_S 7415274439
ptsN_S 7451074998
KP1_4927_S 7504475898
ptsO_S 7589576167
rpsI (30S ribosomal protein S9) 9395094342
rplM (50S ribosomal protein L13) 9435894786
mdh 99850100326
KP1_4977_S 119387119578
KP1_4978_S 119792120808
KP1_4979_S 120808121416
KP1_4980_S 121640122092
accB_S 122115122582
accC_S 122593123942
KP1_4984_S 124053124295
prmA_S 125748126629
KP1_4987_S 126599126829
1418288contig_0013132083yjgB_S 25123531 EMBL GBK
KP1_0569_S 36624546
KP1_0568_S 45365423
KP1_0567_S 54346258
KP1_0517_S 5515955899
KP1_0516_S 5588456987
KP1_0515_S 5589657014
KP1_0514_S 5699858131
KP1_0513_S 5823758881
rplI (50S ribosomal protein L9) 100737101186
rpsR (30S ribosomal protein S18) 101228101455
priB_S 101460101627
rpsF (30S ribosomal protein S6) 101780102175
KP1_0467_S 102516102791
KP1_0446_S 119553119750
KP1_0445_S 119922120263
hflC_S 120346121350
hflK_S 121353122615
hflX_S 122681123961
hfq_S 124037124345
1418283contig_0019129695yjaB_S 170631 EMBL GBK
metA_S 7881717
aceA_S 36444963
aceK_S 50666850
iclR_S 69017827
pgi 2585426285
KP1_0299_S 5520455620
KP1_0300_S 5562455980
uvrA_S 5598158806
ssb_S 5905859582
1418306contig_0023109747aroC_S 3052831616 EMBL GBK
mepA_S 3161932443
yfcA_S 3244333252
yfcM_S 3325233800
KP1_3965_S 3383234113
flk_S 3901439991
KP1_3960_S 3999040118
pdxB_S 4010241238
KP1_3958_S 4130242315
truA_S 4231543127
dedA_S 4315443813
accD_S 4393644919
folX_S 5592456286
yfcG_S 5635256981
yfcF_S 5716257800
yfcD_S 5847259023
nuoA_S 7101571461
nuoB_S 7147772151
nuoC_S 7223874046
nuoE_S 7404974549
nuoF_S 7454675883
1418273contig_002494218KP1_0122_S 3251176 EMBL GBK
btuB_S 11212977
KP1_0120_S 30203142
trmA_S 33444444
KP1_0118_S 44964855
yijC_S 48715503
rpmE (50S ribosomal protein L31) 3013430346
cpxP_S 4086941372
cpxR_S 4152242220
cpxA_S 4221743590
KP1_0077_S 4365744331
sodA_S 4440445030
rhaT_S 4531346347
rhaR_S 4638047225
rhaS_S 4729948135
rhaB_S 4844649912
rhaA_S 4990351168
rhaD_S 5131852148
bipA_S 7656678389
glnA_S 7876880177
glnL_S 8036681415
glnG_S 8142482833
hemN_S 8309084463
KP1_0026_S 8465285158
engB_S 8574286374
polA_S 8672289514
1418299contig_002586478fadA_S 64937656 EMBL GBK
fre_S 77638464
ubiD_S 85149989
rfaH_S 1016810656
tatD_S 1065311444
tatC_S 1148912268
tatB_S 1227112807
tatA_S 1281113110
ubiB_S 1319214832
KP1_0193_S 1482915434
ubiE_S 1544816203
yigN_S 1627417722
udp_S 1785818619
metR_S 2227523228
yigM_S 2311624015
KP1_0183_S 2410424904
pldB_S 2494925941
rhtB_S 2605126671
yigB_S 3637137087
xerC_S 3708737989
KP1_0169_S 3798638693
dapF_S 3869039517
KP1_0167_S 3955039753
cyaY_S 3990040220
ilvY_S 7547376447
ilvA_S 7644477931
ilvD_S 7799179841
ilvE_S 7990280831
ilvM_S 8084881105
1418304contig_000583237ygaH_S 7266172996 EMBL GBK
emrR_S 7311773617
emrA_S 7374374915
KP1_4281_S 7660678282
1418308contig_002672168silR 39064586 EMBL GBK
silA 782510971
1418294contig_002768313phoE 31223541 EMBL GBK
crl_S 3802038418
frsA_S 3847639720
gpt_S 3982640284
pepD_S 4054241999
yafP_S 4204242494
yafE_S 6326764037
KP1_1068_S 6412964935
yafC_S 6632467229
dkgB_S 6727568078
1418295 contig_0028 59629
1418276contig_001453721frdD_S 1335813747 EMBL GBK
blc_S 1386114394
sugE_S 1439114708
ecnB_S 1485214998
ecnA_S 1515815289
efp_S 1536315929
1418289contig_003043866dsbC_S 1083711550 EMBL GBK
xerD_S 1157312469
fldB_S 1257013091
KP1_4612_S 1309813508
KP1_4613_S 1348913755
yqfA_S 1513515794
KP1_4617_S 1595816269
KP1_4618_S 1631917047
KP1_4629_S 2818629388
pepP_S 3057431890
KP1_4632_S 3191432498
KP1_4633_S 3265932988
yggE_S 3726838035
yggA_S 3812538760
yggB_S 3891239769
fbaA_S 3996041039
pgk_S 4113742300
epd_S 4234043368
1418314 contig_0031 36614
1418293contig_003234547zraP_S 62876724 EMBL GBK
KP1_0242_S 67287429
KP1_0241_S 74367708
KP1_0239_S 78958485
nfi_S 85289199
hemE_S 921210276
nudC_S 1031711090
rsd_S 1118411681
rpoB 2791228412
rplL (50S ribosomal protein L7/L12) 3039330758
rplJ (50S ribosomal protein L10) 3082531322
rplA (50S ribosomal protein L1) 3167032374
rplK (50S ribosomal protein L11) 3237832806
1418278contig_000433927rplS (50S ribosomal protein L19) 1537815725 EMBL GBK
rpsP (30S ribosomal protein S16) 1713117379
grpE_S 2138421974
ppnK_S 2209922977
smpA_S 2487325214
KP1_4196_S 2528025570
KP1_4197_S 2556026036
smpB_S 2614726629
1418316contig_003330124ybtS 7282032 EMBL GBK
ybtX 20603340
ybtQ 33335135
ybtP 51226834
ybtA 70918050
ybtU 2392425024
ybtT 2502125824
1418302contig_003426247yrdA_S 303857 EMBL GBK
KP1_4999_S 8331090
aroE_S 10871905
yrdC_S 19092526
yrdD_S 24863028
KP1_5003_S 30553528
smf_S 35004624
def_S 47535262
KP1_5012_S 1021610584
rplQ (50S ribosomal protein L17) 1069311079
KP1_5015_S 1112012109
rpsD (30S ribosomal protein S4) 1213512755
rpsK (30S ribosomal protein S11) 1278913178
rpsM (30S ribosomal protein S13) 1319513551
rpmJ (50S ribosomal protein L36) 1369813814
secY_S 1384815179
rplO (50S ribosomal protein L15) 1518715621
rpmD (50S ribosomal protein L30) 1562515804
rpsE (30S ribosomal protein S5) 1580816311
rplR (50S ribosomal protein L18) 1632616679
rplF (50S ribosomal protein L6) 1668917222
rpsH (30S ribosomal protein S8) 1723517627
rpsN (30S ribosomal protein S14) 1766117966
rplE (50S ribosomal protein L5) 1798118520
rplX (50S ribosomal protein L24) 1853518849
rplN (50S ribosomal protein L14) 1886019231
rpsQ (30S ribosomal protein S17) 1939719651
rpmC (50S ribosomal protein L29) 1965119842
rplP (50S ribosomal protein L16) 1984220252
rpsC (30S ribosomal protein S3) 2026520963
rplV (50S ribosomal protein L22) 2098121313
rpsS (30S ribosomal protein S19) 2132821606
rplB (50S ribosomal protein L2) 2162322444
rplW (50S ribosomal protein L23) 2246222764
rplD (50S ribosomal protein L4) 2276123366
rplC (50S ribosomal protein L3) 2337724006
rpsJ (30S ribosomal protein S10) 2403924350
1418307 contig_0035 19672
1418305contig_002016564KP1_0375_S 128448 EMBL GBK
cbpA_S 4331350
KP1_0378_S 14962194
KP1_0379_S 23573190
hmsS_S 32363685
1418317 contig_0009 14843
1418285 contig_0036 8024
1418315 contig_0029 5315
1418275 contig_0022 3087
1418272 contig_0037 2984
1418319 contig_0038 1736
1418291 contig_0039 1601
1418296 contig_0040 824
1418311 contig_0041 595
1418312 contig_0042 525
1418290 contig_0043 475
1418282 contig_0044 389
1418300 contig_0045 386
1418279 contig_0046 363
1418303 contig_0047 253
1418309 contig_0048 241