Search or browse database

Restricted view: Note that you are currently restricted to viewing or downloading data that was submitted on or prior to 2024-12-31. Please log in to access the full dataset.

Enter search criteria or leave blank to browse all records. Modify form parameters to filter or enter a list of values.

Isolate provenance/primary metadata fields

Display/sort options

Order by:
Display: records per page

Action Reset

Modify form parameters

Click to add or remove additional query terms:

Provenance fields
Allele designations/scheme field values
Allele designation counts
Allele designation status
Annotation status
Sequence bin
Assembly checks
Tagged sequence counts
Tagged sequence status
Attribute values list
Filters

528 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		NativeBetaLactamases				RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	blaLEN (LEN beta-lactamase)	blaOKP_A (OKP-A beta-lactamase)	blaOKP_B (OKP-B beta-lactamase)	blaSHV (SHV beta-lactamase)	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
2894	08-058D		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Sputum	Human_infection		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	12965	0_0_88_0_0_3_0_0_1_0	Kp1	SL231	CG231	23	iuc 3						1
2896	08-1177m		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Human_invasive		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	9727	0_0_88_0_0_3_0_0_1_0	Kp1	SL231	CG231								1					230	ybt 15; ICEKp11
2898	09-0079m		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Human_invasive		2	6	1	3	26	1	77	231			9729	0_0_88_0_0_3_2_0_0_0	Kp1	SL231	CG231								1					230	ybt 15; ICEKp11
3150	UI_3324		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Human_invasive		2	6	1	3	26	1	56	1190	19179	Klebsiella pneumoniae	13021	0_0_88_2_0_1_0_0_0_0	Kp1	SL231	CG14380								2A
8693	M2		K. pneumoniae		0000	Human	Human	Urine	UTI		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	9986	0_0_88_0_0_0_0_13_0_0	Kp1	SL231	CG231								1					376	ybt 14; ICEKp5
8694	M6		K. pneumoniae		0000	Human	Human	Urine	UTI		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	11933 [+1 more] 204	0_0_88_0_0_0_0_11_0_0	Kp1	SL231	CG231								11
10164	KP_NORM_BLD_53804	KP_NORM_BLD_2008_53804	K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	14973 [+1 more] 13401	0_0_88_0_0_0_16_0_0_0	Kp1	SL231	CG231													183	ybt 9; ICEKp3
10166	KP_NORM_BLD_54367	KP_NORM_BLD_2008_54367	K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	13401	0_0_88_0_0_0_16_0_0_0	Kp1	SL231	CG231													183	ybt 9; ICEKp3
10209	KP_NORM_BLD_61044		K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	26	1	56	1190			15010	0_0_88_2_0_0_0_0_0_0	Kp1	SL231	CG14380								1
10258	KP_NORM_BLD_62172	KP_NORM_BLD_2009_62172	K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	293	1	77	2947	18944	Klebsiella pneumoniae	13413	0_0_88_0_0_0_17_0_0_0	Kp1	SL231	CG231								1					437	ybt 14; ICEKp5
10384	KP_NORM_BLD_85462	KP_NORM_BLD_2012_85462	K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	293	1	77	2947	18944	Klebsiella pneumoniae	13457	0_0_88_0_0_0_17_1_0_0	Kp1	SL231	CG231								1					437	ybt 14; ICEKp5
10397	KP_NORM_BLD_91198	KP_NORM_BLD_2013_91198	K. pneumoniae		0000		Homo sapiens	Blood			2	6	1	3	293	1	77	2947	18944	Klebsiella pneumoniae	13468	0_0_88_0_0_0_17_0_1_0	Kp1	SL231	CG231								1					437	ybt 14; ICEKp5
10414	KP_NORM_URN_100386	KP_NORM_URN_2014_100386	K. pneumoniae		0000		Homo sapiens	Urine			2	6	1	3	293	1	77	2947	18944	Klebsiella pneumoniae	13618	0_0_88_0_0_0_17_0_2_0	Kp1	SL231	CG231								1					437	ybt 14; ICEKp5
10415	KP_NORM_URN_100419	KP_NORM_URN_2014_100419	K. pneumoniae		0000		Homo sapiens	Urine			2	6	1	3	293	1	77	2947	18944	Klebsiella pneumoniae	13618	0_0_88_0_0_0_17_0_2_0	Kp1	SL231	CG231								1					437	ybt 14; ICEKp5
10973	OM715		K. pneumoniae		0000	Human	Human	Unknown			2	6	1	3	26	1	77	231	139191	Klebsiella pneumoniae	14144 [+3 more] 14527, 14544, 14569	0_0_88_0_0_0_0_16_0_0	Kp1	SL231	CG231								1					376	ybt 14; ICEKp5
13440	SPARK_1881_C1		K. pneumoniae		0000	Human	Human	Urine			2	6	1	3	26	1	56	1190	139449	Klebsiella pneumoniae	10506	0_0_88_1_1_0_0_0_0_0	Kp1	SL231	CG14238								1
14259	SPARK_683_C1		K. pneumoniae		0000	Human	Human	Blood			2	6	1	3	26	1	56	1190	139449	Klebsiella pneumoniae	10506	0_0_88_1_1_0_0_0_0_0	Kp1	SL231	CG14238								1
14270	SPARK_696_C1		K. pneumoniae		0000	Human	Human	Urine			2	6	1	3	26	1	56	1190	139449	Klebsiella pneumoniae	10506	0_0_88_1_1_0_0_0_0_0	Kp1	SL231	CG14238								1
14280	SPARK_705_C1		K. pneumoniae		0000	Human	Human	Blood			2	6	1	3	26	1	56	1190	139449	Klebsiella pneumoniae	10506	0_0_88_1_1_0_0_0_0_0	Kp1	SL231	CG14238								1
16056	G18253166		K. pneumoniae			Human	Human	Blood	colonization	Other	2	6	1	3	26	1	758	5602	18944	Klebsiella pneumoniae	11669 [+1 more] 11190	0_0_88_0_0_0_0_0_2_0	Kp1	SL231	CG231								1					376	ybt 14; ICEKp5
18357	NK_H8_120		K. pneumoniae		0000	Human	human	blood	bacteraemia		2	6	1	3	26	1	77	231	200712	Klebsiella pneumoniae	16118 [+1 more] 42316	0_0_88_0_4_0_0_0_0_0	Kp1	SL231	CG231								1
21764	KH-03150		K. pneumoniae		0000	Human	Human	Anus			2	6	1	392	26	1	77	5970	18944	Klebsiella pneumoniae	11758	0_0_88_0_2_0_0_0_0_0	Kp1	SL231	CG231								1
21938	FMUL5		K. pneumoniae		0000	Human	Human	Biopsy			2	6	1	3	26	1	77	231	44154	Klebsiella pneumoniae	11817	0_0_88_0_0_0_15_1_1_0	Kp1	SL231	CG231													584	ybt 9; ICEKp?
22011	FMUL680		K. pneumoniae		0000	Human	Human	Purulent exudate			2	6	1	3	26	1	77	231	44154	Klebsiella pneumoniae	11823	0_0_88_0_0_0_15_2_0_0	Kp1	SL231	CG231													584	ybt 9; ICEKp?
22404	G20252107	P-1721	K. pneumoniae		0000	Human	Human	Pus swab		Full sequencing of CPS cluster	2	6	462	3	26	1	77	6259	18944	Klebsiella pneumoniae	16482	0_0_88_0_0_0_18_0_0_0	Kp1	SL231	CG231								1					376	ybt 14; ICEKp5

Analysis tools

Breakdown:

Analysis:

Export:

Third party:

Search or browse database

Modify form parameters

Analysis tools

Dashboard settings