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13 records returned. Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
4053	997	58837	K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Stool		wzi sequencing	2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	13060	0_0_22_8_4_1_0_0_0_0	Kp1	SL17	CG10122
4903	SB5663	a0324144; P242M	K. pneumoniae	Kp1 (7 loci)	0000		pregnant woman	Fecal sample	carriage		2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	13317	0_0_22_8_13_0_0_0_0_0	Kp1	SL17	CG10122					32	rmp 3; ICEKp1	7	iro 3
13505	SPARK_1980_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	10540	0_0_22_8_5_0_0_0_0_0	Kp1	SL17	CG10122
13560	SPARK_2066_C1		K. pneumoniae		0000	Human	Human	Intestinal			2	1	1	1	4	4	4	17	210296	Klebsiella pneumoniae	10567	0_0_22_8_6_0_0_0_0_0	Kp1	SL17	CG10122
13855	SPARK_2693_C1		K. pneumoniae		0000	Animal	Dog	Faeces			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	10738	0_0_22_8_8_0_0_0_0_0	Kp1	SL17	CG10122
13902	SPARK_2833_C1		K. pneumoniae		0000	Environment	Environment	Water			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	10783	0_0_22_8_7_0_0_0_0_0	Kp1	SL17	CG10122
14130	SPARK_510_C1		K. pneumoniae		0000	Human	Human	Intestinal			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	10918	0_0_22_8_10_0_0_0_0_0	Kp1	SL17	CG10122
14219	SPARK_650_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			2	1	1	1	4	4	4	17	139437	Klebsiella pneumoniae	10973	0_0_22_8_9_0_0_0_0_0	Kp1	SL17	CG10122
46789	GCA_003403275.1	1013	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	71	0_0_22_8_0_0_0_0_0_0	Kp1	SL17	CG10122
47280	GCA_002269925.1	A2	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	606	0_0_22_8_2_0_0_0_0_0	Kp1	SL17	CG10122
47527	GCA_000693035.1	BIDMC 69	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	824	0_0_22_8_1_0_0_0_0_0	Kp1	SL17	CG10122
50690	GCA_900087895.1	KpMx1	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	3397	0_0_22_9_0_0_0_0_0_0	Kp1	SL17	CG10273
53617	GCA_002269905.1	A5	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	1	1	1	4	4	4	17	18957	Klebsiella pneumoniae	608	0_0_22_8_3_0_0_0_0_0	Kp1	SL17	CG10122

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature