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82 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
2894	08-058D		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Sputum	Human_infection		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	12965	0_0_88_0_0_3_0_0_1_0	Kp1	SL231	CG231	23	iuc 3
2896	08-1177m		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Human_invasive		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	9727	0_0_88_0_0_3_0_0_1_0	Kp1	SL231	CG231									230	ybt 15; ICEKp11
2898	09-0079m		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Blood	Human_invasive		2	6	1	3	26	1	77	231			9729	0_0_88_0_0_3_2_0_0_0	Kp1	SL231	CG231									230	ybt 15; ICEKp11
8693	M2		K. pneumoniae		0000	Human	Human	Urine	UTI		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	9986	0_0_88_0_0_0_0_13_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
8694	M6		K. pneumoniae		0000	Human	Human	Urine	UTI		2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	204,11933	0_0_88_0_0_0_0_11_0_0	Kp1	SL231	CG231
10973	OM715		K. pneumoniae		0000	Human	Human	Unknown			2	6	1	3	26	1	77	231	139191	Klebsiella pneumoniae	14144,14527,14544,14569	0_0_88_0_0_0_0_16_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
16056	G18253166		K. pneumoniae			Human	Human	Blood	colonization	Other	2	6	1	3	26	1	758	5602	18944	Klebsiella pneumoniae	11190,11669	0_0_88_0_0_0_0_0_2_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
21764	KH-03150		K. pneumoniae		0000	Human	Human	Anus			2	6	1	392	26	1	77	5970	18944	Klebsiella pneumoniae	11758	0_0_88_0_2_0_0_0_0_0	Kp1	SL231	CG231
21938	FMUL5		K. pneumoniae		0000	Human	Human	Biopsy			2	6	1	3	26	1	77	231	44154	Klebsiella pneumoniae	11817	0_0_88_0_0_0_15_1_1_0	Kp1	SL231	CG231									584	ybt 9; ICEKp?
22011	FMUL680		K. pneumoniae		0000	Human	Human	Purulent exudate			2	6	1	3	26	1	77	231	44154	Klebsiella pneumoniae	11823	0_0_88_0_0_0_15_2_0_0	Kp1	SL231	CG231									584	ybt 9; ICEKp?
22404	G20252107	P-1721	K. pneumoniae		0000	Human	Human	Pus swab		Full sequencing of CPS cluster	2	6	462	3	26	1	77	6259	18944	Klebsiella pneumoniae	16482	0_0_88_0_0_0_18_0_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
22406	G20252163	P-2774	K. pneumoniae		0000	Human	Human	Pus swab		Full sequencing of CPS cluster	2	6	462	3	26	1	869	6261	18944	Klebsiella pneumoniae	16484	0_0_88_0_0_0_19_0_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
46778	GCA_900084925.1	k684	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	56	0_0_88_0_0_0_5_0_0_0	Kp1	SL231	CG231
46911	GCA_004291295.1	242CHI	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	204	0_0_88_0_0_0_0_11_0_0	Kp1	SL231	CG231
46930	GCA_004291275.1	35DN	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	239	0_0_88_0_0_0_13_0_0_0	Kp1	SL231	CG231
47042	GCA_900494595.1	4300STDY6470447	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	358	0_0_88_0_0_5_0_0_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
47070	GCA_900494215.1	4300STDY6470477	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	383,4293,33542,34105	0_0_88_0_0_0_1_0_0_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
47092	GCA_900493615.1	4300STDY6542359	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	406	0_0_88_0_0_6_0_0_0_0	Kp1	SL231	CG231	23	iuc 3
47249	GCA_004145965.1	76CHI	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	571	0_0_88_0_0_0_6_0_0_0	Kp1	SL231	CG231
47478	GCA_002188185.1	BH2511	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	786	0_0_88_0_0_1_0_0_0_0	Kp1	SL231	CG231
47575	GCA_002846055.1	C13	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	862	0_0_88_0_0_0_0_0_1_0	Kp1	SL231	CG231
47581	GCA_002406975.1	C15	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231			867	0_0_88_0_0_0_0_0_1_0	Kp1	SL231	CG231
47583	GCA_002406945.1	C17	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	869	0_0_88_0_0_0_0_0_6_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
47584	GCA_002406965.1	C18	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	870	0_0_88_0_0_0_0_0_1_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5
47586	GCA_002374295.1	C1	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	6	1	3	26	1	77	231	18944	Klebsiella pneumoniae	872	0_0_88_0_0_0_0_0_5_0	Kp1	SL231	CG231									376	ybt 14; ICEKp5

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature