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22 records returned. Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
12075	MVK-04F020		K. pneumoniae		0000		environment	chicken meat			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	5477	0_0_127_8_8_0_0_0_0_0	Kp1	SL6	CG6
13242	SPARK_1530_C1		K. pneumoniae		0000	Human	Human	Urine			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	10402	0_0_127_8_8_1_0_0_0_0	Kp1	SL6	CG6									376	ybt 14; ICEKp5
13559	SPARK_2063_C1		K. pneumoniae		0000	Human	Human	Faeces			2	10	1	1	14	3	20	6	210298	Klebsiella pneumoniae	10566	0_0_127_8_12_0_1_0_0_0	Kp1	SL6	CG6									376	ybt 14; ICEKp5
14016	SPARK_36_C2		K. pneumoniae		0000	Human	Human	Intestinal			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	10847	0_0_127_8_15_0_0_0_0_1	Kp1	SL6	CG6
14017	SPARK_36_C3		K. pneumoniae		0000	Human	Human	Intestinal			2	10	1	1	14	3	20	6	139374	Klebsiella pneumoniae	10848	0_0_127_8_15_0_0_0_0_0	Kp1	SL6	CG6
47736	GCA_001404095.1	CH1034	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	1024	0_0_127_8_4_0_0_0_0_0	Kp1	SL6	CG6									152	ybt 14; ICEKp5
48320	GCA_900511215.1	EuSCAPE_AT013	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	43964	Klebsiella pneumoniae	1439	0_0_127_8_3_0_0_0_0_0	Kp1	SL6	CG6
48466	GCA_900512325.1	EuSCAPE_DE021	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	1563	0_0_127_8_1_0_0_0_0_0	Kp1	SL6	CG6
48471	GCA_900512425.1	EuSCAPE_DE027	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	43687	Klebsiella pneumoniae	1568	0_0_127_8_2_0_0_0_0_0	Kp1	SL6	CG6
48645	GCA_900500825.1	EuSCAPE_ES267	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	44123	Klebsiella pneumoniae	1713	0_0_127_8_6_0_0_0_0_0	Kp1	SL6	CG6
48717	GCA_900517865.1	EuSCAPE_GR009	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	44124	Klebsiella pneumoniae	1777	0_0_127_8_7_0_0_0_0_0	Kp1	SL6	CG6
51587	GCA_001929345.1	ATCC 9621	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	65815	Klebsiella pneumoniae	4131	0_0_127_8_0_0_0_0_0_0	Kp1	SL6	CG6
52458	GCA_900174195.1	VRCO0314	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52459	GCA_900173975.1	VRCO0315	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52460	GCA_900173405.1	VRCO0316	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52461	GCA_900173395.1	VRCO0317	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52462	GCA_900173425.1	VRCO0318	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52463	GCA_900173435.1	VRCO0319	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52464	GCA_900173445.1	VRCO0320	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52465	GCA_900173455.1	VRCO0321	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52466	GCA_900173475.1	VRCO0322	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6
52467	GCA_900173465.1	VRCO0323	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			2	10	1	1	14	3	20	6	58595	Klebsiella pneumoniae	4729,8365	0_0_127_8_5_0_0_0_0_0	Kp1	SL6	CG6

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature