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14 records returned. Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
2949	AJ026		K. variicola subsp. variicola	Kp3 (7 loci)	0000	Human	Human	Sputum	NA		16	24	21	53	104	17	67	695	19347	Klebsiella variicola	9738	1_0_24_1_1_0_0_0_1_0	Kp3	SL695	CG695
2972	AJ182		K. variicola subsp. variicola	Kp3 (7 loci)	0000	Human	Human	Urine	NA		16	24	21	53	104	17	67	695	19347	Klebsiella variicola	12981	1_0_24_1_1_0_0_0_2_0	Kp3	SL695	CG695
4646	SB5600	1355	K. variicola subsp. variicola	Kp3 (7 loci)	0000		pregnant woman	Fecal sample	carriage		28	24	21	53	47	153	67	2594	200798	Klebsiella variicola	13271	1_0_22_5_0_0_0_0_0_0	Kp3	SL2594	CG2594
9510	SB6448	MVK-03E112	K. variicola subsp. variicola		0000	Environment	Environment	roots			28	24	21	53	454	153	67	4441	200797	Klebsiella variicola	12576	1_0_22_1_0_0_0_0_0_0	Kp3	SL2594	CG2594
12124	176		K. variicola subsp. variicola		0000	Animal	Animal	Unknown			28	24	21	27		153	67		202853	Klebsiella variicola	15353	1_0_22_3_0_0_0_0_0_0	Kp3	SL2594	CG2594
18599	21P076710		K. variicola subsp. variicola		0000	Human	Human	Blood Culture	bacteraemia		316	24	21	53	47	153	67	5928			16184	1_0_22_4_0_0_0_0_0_0	Kp3	SL2594	CG2594
53244	GCA_900622585.1	AJ055	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			16	24	21	53	104	17	67	695	19347	Klebsiella variicola	5144	1_0_24_1_1_0_0_0_0_0	Kp3	SL695	CG695
53304	GCA_900509595.1	EuSCAPE_IT344	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			28	24	21	53	47	153	67	2594	44108	Klebsiella variicola	5188	1_0_22_0_0_0_0_0_0_0	Kp3	SL2594	CG2594
53315	GCA_900509815.1	EuSCAPE_RS096	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			16	24	21	53	47	17	67	360	91643	Klebsiella variicola	5199	1_0_24_0_0_0_0_0_0_0	Kp3	SL695	CG360
53355	GCA_000694735.1	MGH 76	K. variicola subsp. variicola			Unknown	Unknown	Unknown			28	24	21	27	47	153			43446	Klebsiella variicola	5227	1_0_23_0_0_0_0_0_0_0	Kp3	SL2634	CG10050
53409	GCA_003195515.1	WUSM_KV_04	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			16	24	21	53	104	17	567	3966	19347	Klebsiella variicola	5265	1_0_24_1_2_0_0_0_0_0	Kp3	SL695	CG695
53423	GCA_003196355.1	WUSM_KV_17	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			16	24	21	53	104	17	67	695	19347	Klebsiella variicola	5277	1_0_24_1_0_0_0_0_0_0	Kp3	SL695	CG695
53449	GCA_003196995.1	WUSM_KV_45	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			16	24	21	53	104	17	67	695	88908	Klebsiella variicola	5302	1_0_24_2_0_0_0_0_0_0	Kp3	SL695	CG10105
53456	GCA_003196975.1	WUSM_KV_52	K. variicola subsp. variicola	Kp3 (7 loci)		Unknown	Unknown	Unknown			28	24	21	27	47	153	67	2634	44502	Klebsiella variicola	5309	1_0_23_1_0_0_0_0_0_0	Kp3	SL2634	CG2634

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature