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32 records returned (1 - 25 displayed). Click the hyperlinks for detailed information.

Isolate fields											MLST								Ribosomal MLST		scgMLST629_S					AbST		CbST		RmST		SmST		YbST
id	isolate	aliases	taxonomic designation	phylogroup from ST	QC status	source type	host	source details	infection	K typing method	gapA	infB	mdh	pgi	phoE	rpoB	tonB	ST	rST	species	scgST	LINcode	Phylogroup	Sublineage	Clonal group	ST	iuc lineage	ST	clb lineage	ST	rmp lineage	ST	iro lineage	ST	lineage ICE
2958	AJ056		K. pneumoniae		0000	Human	Human	Sputum	Human_infection		123	1	5	1	7	11			19067	Klebsiella pneumoniae	12972	0_0_53_4_5_0_0_0_0_0	Kp1	SL611	CG611									30	ybt 4; plasmid
4413	KpPA22CS		K. pneumoniae	Kp1 (7 loci)	0000		Human	Urine	cystitis		4	1	5	1	9	11	24	239	19067	Klebsiella pneumoniae	13100	0_0_53_13_0_0_0_0_0_0	Kp1	SL611	CG11642
4741	US-VA-2008b		K. pneumoniae	Kp1 (7 loci)	0000	Human	Human	Unknown			10	1	5	1	129	11	24	719	43548	Klebsiella pneumoniae	9879	0_0_53_1_4_0_0_0_0_0	Kp1	SL611	CG3809
12016	MVK-06F133		K. pneumoniae		0000		environment	chicken meat			4	1	5	1	7	1	24	2158	200551	Klebsiella pneumoniae	5428	0_0_53_5_0_0_0_0_0_0	Kp1	SL611	CG10338
12890	SPARK_1119_C2		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	2	1	8	11	24	5170	200553	Klebsiella pneumoniae	10246	0_0_53_9_0_0_0_0_0_0	Kp1	SL611	CG10983
13318	SPARK_1661_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10445	0_0_53_2_1_0_0_0_0_0	Kp1	SL611	CG10154
13430	SPARK_1870_C1		K. pneumoniae		0000	Animal	sow	Swab			10	1	5	1	129	11	24	719	43548	Klebsiella pneumoniae	10502	0_0_53_0_0_0_1_0_0_0	Kp1	SL611	CG719
13473	SPARK_1927_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10524	0_0_53_2_1_0_1_0_0_0	Kp1	SL611	CG10154
13474	SPARK_1928_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10524	0_0_53_2_1_0_1_0_0_0	Kp1	SL611	CG10154
13475	SPARK_1929_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10524	0_0_53_2_1_0_1_0_0_0	Kp1	SL611	CG10154
13478	SPARK_1932_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10524	0_0_53_2_1_0_1_0_0_0	Kp1	SL611	CG10154
13479	SPARK_1933_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10527	0_0_53_2_1_0_1_0_1_0	Kp1	SL611	CG10154
13480	SPARK_1934_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10524	0_0_53_2_1_0_1_0_0_0	Kp1	SL611	CG10154
13509	SPARK_1984_C1		K. pneumoniae		0000	Animal	Cow	Rectal swab			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	10445	0_0_53_2_1_0_0_0_0_0	Kp1	SL611	CG10154
13524	SPARK_2009_C1		K. pneumoniae		0000	Environment	Environment	Swab			5	1	5	1	7	11	24	611	19067	Klebsiella pneumoniae	10552	0_0_53_4_3_0_0_0_0_0	Kp1	SL611	CG611
13563	SPARK_207_C2		K. pneumoniae		0000	Animal	Pig	Faeces			10	1	5	1	129	11	24	719	139408	Klebsiella pneumoniae	10569	0_0_53_1_3_1_0_0_0_0	Kp1	SL611	CG3809
13564	SPARK_207_C3		K. pneumoniae		0000	Animal	Pig	Faeces			10	1	5	1	129	11	24	719	139408	Klebsiella pneumoniae	10569	0_0_53_1_3_1_0_0_0_0	Kp1	SL611	CG3809
13715	SPARK_2385_C1		K. pneumoniae		0000	Animal	Fly	internal_organs			10	1	5	1	129	11	24	719	139408	Klebsiella pneumoniae	10648	0_0_53_1_3_1_0_1_0_0	Kp1	SL611	CG3809
14672	T7-130		K. pneumoniae		0000		Homo sapiens	Faeces			7	1	5	1	7	11	24	483	200550	Klebsiella pneumoniae	12214	0_0_53_3_3_0_0_0_0_0	Kp1	SL611	CG483
16623	11A18CPO024B		K. pneumoniae			Human	human	unknown			310	1	5	1	7	11	24	5811	19067	Klebsiella pneumoniae	11202,11704	0_0_53_8_0_0_0_0_0_0	Kp1	SL611	CG11180
18573	Rush_KPC_168	168	K. pneumoniae		0000	Human	human	Rectal swab			4	1	5	1	129	11	24	5890	19067	Klebsiella pneumoniae	11735	0_0_53_7_0_0_0_0_0_0	Kp1	SL611	CG11342			52	clb 3					289	ybt 17; ICEKp10
18574	Rush_KPC_216	216	K. pneumoniae		0000	Human	human	Rectal swab			4	1	5	1	129	11	24	5890	19067	Klebsiella pneumoniae	11735	0_0_53_7_0_0_0_0_0_0	Kp1	SL611	CG11342			52	clb 3					289	ybt 17; ICEKp10
47421	GCA_003012855.1	B13	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			5	1	5	1	7	11	24	611	43992	Klebsiella pneumoniae	729	0_0_53_2_0_0_0_0_0_0	Kp1	SL611	CG10154
48612	GCA_900517325.1	EuSCAPE_ES220	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			7	1	5	1	7	11	24	483	19067	Klebsiella pneumoniae	1690	0_0_53_3_0_0_0_0_0_0	Kp1	SL611	CG483
48613	GCA_900517305.1	EuSCAPE_ES221	K. pneumoniae	Kp1 (7 loci)		Unknown	Unknown	Unknown			7	1	5	1	7	11	24	483	19067	Klebsiella pneumoniae	1690	0_0_53_3_0_0_0_0_0_0	Kp1	SL611	CG483

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belonging to any project
not belonging to any project
Barbier et al_ApplEnvironMicrobiol_2020
Bialek et al 2014_EID
Biedrzycka et al 2021_JAC
BIRDY_Madagascar
Bowers et al 2015_PlosOne
CG258-TP
Dataset1_ST147_SARA_cours
Dataset2_CG147_SARA_cours
Ellington et al. 2019
Ezzat_2021
Garcia-Fierro et al 2022_JAC
GenEpi-Bio_DS_1
GenEpi-Bio_DS_2
Gorrie et al. 2017
Hennart_et_al_2022_full_collection
Hennart et al. 2022_MBE
Huynh et al 2020 Gut Microbes
Isolates Excluded (failed QC)
Isolates Exlcuded (contigs size)
Martin et al 2021_PNAS
Musicha et al. 2019
OkomoEtAl2020
Outbreaks
Plasmids
project_RI_JG_SB
Public isolates
published_genomes
Raffelsberger et al 2021_GutMicrobes
Rodrigues et al 2022_MGen
Rodrigues et al 2022_MSpectrum
Rollin et al 2022_IJID
SPARK project
ST258_ST512_ST1199
Test cg634 nomemclature